BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028401
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281501.1| PREDICTED: putative rRNA methyltransferase y...   237   6e-61
emb|CAN74970.1| hypothetical protein VITISV_001039 [Vitis vinifera]   237   6e-61
ref|XP_003543613.1| PREDICTED: putative rRNA methyltransferase y...   226   2e-57
ref|XP_002300031.1| predicted protein [Populus trichocarpa] gi|2...   225   2e-57
ref|XP_004166866.1| PREDICTED: putative rRNA methyltransferase Y...   222   2e-56

>ref|XP_002281501.1| PREDICTED: putative rRNA methyltransferase ylbH [Vitis vinifera]
           gi|296087748|emb|CBI35004.3| unnamed protein product
           [Vitis vinifera]
          Length = 331

 Score =  237 bits (605), Expect = 6e-61
 Identities = 115/131 (87%), Positives = 122/131 (93%)
 Frame = -3

Query: 394 KGMDVRPMMEVVKGAAFDILQVAGGNPASLRPGRWLDLYSGTGSVGIEAISRGCSEAHFV 215
           KGMDVRPMMEVVKGAAFDILQVAGG PASLRPGRWLDLYSGTGSVGIEA+SRGCSE HFV
Sbjct: 128 KGMDVRPMMEVVKGAAFDILQVAGGCPASLRPGRWLDLYSGTGSVGIEALSRGCSEVHFV 187

Query: 214 EMDPWVISEVLRPNLEWTEFLDASVIHTLRVETFLERADKFVGQNGSFDYISVTPPYTAV 35
           EMDPWV+S+VLRPNLEWT FLD SVIHT+RVE FLERA +FVG++ SFDYISVTPPYT V
Sbjct: 188 EMDPWVVSDVLRPNLEWTGFLDVSVIHTVRVENFLERAMQFVGKDQSFDYISVTPPYTEV 247

Query: 34  DYSVLMGQISS 2
           DY VLMGQISS
Sbjct: 248 DYEVLMGQISS 258


>emb|CAN74970.1| hypothetical protein VITISV_001039 [Vitis vinifera]
          Length = 408

 Score =  237 bits (605), Expect = 6e-61
 Identities = 115/131 (87%), Positives = 122/131 (93%)
 Frame = -3

Query: 394 KGMDVRPMMEVVKGAAFDILQVAGGNPASLRPGRWLDLYSGTGSVGIEAISRGCSEAHFV 215
           KGMDVRPMMEVVKGAAFDILQVAGG PASLRPGRWLDLYSGTGSVGIEA+SRGCSE HFV
Sbjct: 128 KGMDVRPMMEVVKGAAFDILQVAGGCPASLRPGRWLDLYSGTGSVGIEALSRGCSEVHFV 187

Query: 214 EMDPWVISEVLRPNLEWTEFLDASVIHTLRVETFLERADKFVGQNGSFDYISVTPPYTAV 35
           EMDPWV+S+VLRPNLEWT FLD SVIHT+RVE FLERA +FVG++ SFDYISVTPPYT V
Sbjct: 188 EMDPWVVSDVLRPNLEWTGFLDVSVIHTVRVENFLERAMQFVGKDQSFDYISVTPPYTEV 247

Query: 34  DYSVLMGQISS 2
           DY VLMGQISS
Sbjct: 248 DYEVLMGQISS 258


>ref|XP_003543613.1| PREDICTED: putative rRNA methyltransferase ylbH-like [Glycine max]
          Length = 311

 Score =  226 bits (575), Expect = 2e-57
 Identities = 109/130 (83%), Positives = 118/130 (90%)
 Frame = -3

Query: 394 KGMDVRPMMEVVKGAAFDILQVAGGNPASLRPGRWLDLYSGTGSVGIEAISRGCSEAHFV 215
           KGMDVRPMMEVVKGAAFDILQ AGG PA+LRPGRWLDLYSGTGSVGIEA+SRGCS+ HFV
Sbjct: 128 KGMDVRPMMEVVKGAAFDILQAAGGCPAALRPGRWLDLYSGTGSVGIEALSRGCSQVHFV 187

Query: 214 EMDPWVISEVLRPNLEWTEFLDASVIHTLRVETFLERADKFVGQNGSFDYISVTPPYTAV 35
           EMDPWV+S+VLRPNLE T FLDASVIHT+RVE F ERA++FVG +G FDYISVTPPYT V
Sbjct: 188 EMDPWVVSDVLRPNLEETGFLDASVIHTVRVEKFFERAEQFVGNSGPFDYISVTPPYTQV 247

Query: 34  DYSVLMGQIS 5
           DY VLM QIS
Sbjct: 248 DYGVLMRQIS 257


>ref|XP_002300031.1| predicted protein [Populus trichocarpa] gi|222847289|gb|EEE84836.1|
           predicted protein [Populus trichocarpa]
          Length = 321

 Score =  225 bits (574), Expect = 2e-57
 Identities = 108/130 (83%), Positives = 119/130 (91%)
 Frame = -3

Query: 394 KGMDVRPMMEVVKGAAFDILQVAGGNPASLRPGRWLDLYSGTGSVGIEAISRGCSEAHFV 215
           KGMDVRPMMEVVKG+AFDILQ AGG PASLRPGRWLDLYSGTGSVGIEAISRGCSE HFV
Sbjct: 137 KGMDVRPMMEVVKGSAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFV 196

Query: 214 EMDPWVISEVLRPNLEWTEFLDASVIHTLRVETFLERADKFVGQNGSFDYISVTPPYTAV 35
           EMDPWV+S VL+PNLE T FLD SVIHT+RVE+FLERA++FVGQ+ +FD+ISVTPPYT V
Sbjct: 197 EMDPWVVSNVLQPNLECTGFLDVSVIHTVRVESFLERAEQFVGQDSAFDFISVTPPYTQV 256

Query: 34  DYSVLMGQIS 5
           DY +LM QIS
Sbjct: 257 DYGILMDQIS 266


>ref|XP_004166866.1| PREDICTED: putative rRNA methyltransferase YlbH-like [Cucumis
           sativus]
          Length = 313

 Score =  222 bits (566), Expect = 2e-56
 Identities = 106/130 (81%), Positives = 115/130 (88%)
 Frame = -3

Query: 394 KGMDVRPMMEVVKGAAFDILQVAGGNPASLRPGRWLDLYSGTGSVGIEAISRGCSEAHFV 215
           KG+DVRPMMEVVKGAAFDILQ AGG PASLRPGRWLDLYSGTGSVGIEA+SRGCSE HFV
Sbjct: 127 KGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAMSRGCSEVHFV 186

Query: 214 EMDPWVISEVLRPNLEWTEFLDASVIHTLRVETFLERADKFVGQNGSFDYISVTPPYTAV 35
           EMDPWV+S+VLRPNLE T F D SVIHT+RVE F+ERAD+ +G    FDYISVTPPYT V
Sbjct: 187 EMDPWVVSDVLRPNLESTGFFDVSVIHTIRVENFIERADQLIGTERPFDYISVTPPYTQV 246

Query: 34  DYSVLMGQIS 5
           DY VLMGQ+S
Sbjct: 247 DYGVLMGQLS 256