BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028400
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281501.1| PREDICTED: putative rRNA methyltransferase y...    79   5e-13
emb|CAN74970.1| hypothetical protein VITISV_001039 [Vitis vinifera]    79   5e-13
ref|XP_003543613.1| PREDICTED: putative rRNA methyltransferase y...    72   4e-11
gb|ACU20682.1| unknown [Glycine max]                                   72   4e-11
ref|XP_003618426.1| hypothetical protein MTR_6g009400 [Medicago ...    68   9e-10

>ref|XP_002281501.1| PREDICTED: putative rRNA methyltransferase ylbH [Vitis vinifera]
           gi|296087748|emb|CBI35004.3| unnamed protein product
           [Vitis vinifera]
          Length = 331

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 40/70 (57%), Positives = 45/70 (64%)
 Frame = +3

Query: 207 ERYGFDSKELLSQSSSXXXXXXXXXXXXXXSSVVPLEEPKPPRTTHKLLQVLAGTARRKK 386
           ERYG+D+ E +S+ S                  V  E+PKPPRTTHKLLQVL G ARRKK
Sbjct: 64  ERYGYDANEFVSEPSPKTTRRRKELQKTGKGKQVSPEDPKPPRTTHKLLQVLGGKARRKK 123

Query: 387 LLSPKGMDVR 416
           LLSPKGMDVR
Sbjct: 124 LLSPKGMDVR 133


>emb|CAN74970.1| hypothetical protein VITISV_001039 [Vitis vinifera]
          Length = 408

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 40/70 (57%), Positives = 45/70 (64%)
 Frame = +3

Query: 207 ERYGFDSKELLSQSSSXXXXXXXXXXXXXXSSVVPLEEPKPPRTTHKLLQVLAGTARRKK 386
           ERYG+D+ E +S+ S                  V  E+PKPPRTTHKLLQVL G ARRKK
Sbjct: 64  ERYGYDANEFVSEPSPKTTRRRKELQKTGKGKQVSPEDPKPPRTTHKLLQVLGGKARRKK 123

Query: 387 LLSPKGMDVR 416
           LLSPKGMDVR
Sbjct: 124 LLSPKGMDVR 133


>ref|XP_003543613.1| PREDICTED: putative rRNA methyltransferase ylbH-like [Glycine max]
          Length = 311

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 42/73 (57%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
 Frame = +3

Query: 207 ERYGFD--SKELLSQSSSXXXXXXXXXXXXXXSSVV-PLEEPKPPRTTHKLLQVLAGTAR 377
           E+YG+D  + E  SQSSS                V  P E+PKPPR THKLLQVL GTAR
Sbjct: 61  EKYGYDIDADEYFSQSSSKSKRRKEQPRRRGGKQVQDPPEDPKPPRVTHKLLQVLGGTAR 120

Query: 378 RKKLLSPKGMDVR 416
           R KLLSPKGMDVR
Sbjct: 121 RVKLLSPKGMDVR 133


>gb|ACU20682.1| unknown [Glycine max]
          Length = 199

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 42/73 (57%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
 Frame = +3

Query: 207 ERYGFD--SKELLSQSSSXXXXXXXXXXXXXXSSVV-PLEEPKPPRTTHKLLQVLAGTAR 377
           E+YG+D  + E  SQSSS                V  P E+PKPPR THKLLQVL GTAR
Sbjct: 61  EKYGYDIDADEYFSQSSSKSKRRKEQPRRRGGKQVQDPPEDPKPPRVTHKLLQVLGGTAR 120

Query: 378 RKKLLSPKGMDVR 416
           R KLLSPKGMDVR
Sbjct: 121 RVKLLSPKGMDVR 133


>ref|XP_003618426.1| hypothetical protein MTR_6g009400 [Medicago truncatula]
           gi|355493441|gb|AES74644.1| hypothetical protein
           MTR_6g009400 [Medicago truncatula]
          Length = 325

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 40/74 (54%), Positives = 44/74 (59%), Gaps = 4/74 (5%)
 Frame = +3

Query: 207 ERYGFD--SKELLSQSSSXXXXXXXXXXXXXXSSVV--PLEEPKPPRTTHKLLQVLAGTA 374
           ERYG+D  + +   QSSS                 V  P  EPKPPRTTHKLLQV+ GTA
Sbjct: 67  ERYGYDVDADDYFPQSSSPKSKRKKEQQKTRGGKQVQDPPVEPKPPRTTHKLLQVIGGTA 126

Query: 375 RRKKLLSPKGMDVR 416
           RR KLLSPK MDVR
Sbjct: 127 RRTKLLSPKSMDVR 140