BLASTX nr result

ID: Coptis25_contig00028395 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028395
         (691 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004144659.1| PREDICTED: probably inactive leucine-rich re...   199   4e-49
ref|XP_002283010.2| PREDICTED: LOW QUALITY PROTEIN: probably ina...   196   4e-48
ref|XP_002323303.1| predicted protein [Populus trichocarpa] gi|2...   191   2e-46
ref|XP_002526749.1| Receptor protein kinase CLAVATA1 precursor, ...   189   3e-46
ref|XP_002330987.1| predicted protein [Populus trichocarpa] gi|2...   189   4e-46

>ref|XP_004144659.1| PREDICTED: probably inactive leucine-rich repeat receptor-like
           protein kinase At5g06940-like [Cucumis sativus]
           gi|449517277|ref|XP_004165672.1| PREDICTED: probably
           inactive leucine-rich repeat receptor-like protein
           kinase At5g06940-like [Cucumis sativus]
          Length = 889

 Score =  199 bits (506), Expect = 4e-49
 Identities = 108/198 (54%), Positives = 131/198 (66%), Gaps = 1/198 (0%)
 Frame = -3

Query: 593 MATTFKALIYLSLFYSVFILRTTNALQETDILITFKTSIEDPLNSLSTWSKNSNTHICNW 414
           MA+ FK    LSL ++ FIL  +++ + T  L+TFK SI+D  NSLS W  +S TH CNW
Sbjct: 1   MASPFKPPFLLSLAFAFFILGYSSSEEPT--LLTFKASIKDSTNSLSNWVSSSQTHFCNW 58

Query: 413 TGVXXXXXXXXXXXXXS-LNLQGLNLSGEISPSLCQLSSLSHLNLADNLFNQPIPLHLSQ 237
           TG+             S ++LQGLNLSGEIS S+C+L  L+HLNLADN FNQPIPLHLSQ
Sbjct: 59  TGIACVTSSSPSLLSVSAIDLQGLNLSGEISSSICELPRLAHLNLADNRFNQPIPLHLSQ 118

Query: 236 CNGLETLNLSYNLIWGTIPDQISLFSSLKVLDMSWNHIEGVIPDXXXXXXXXXXXXXXXX 57
           C  LETLNLS NLIWGTIPDQISLFSSL+VLD   NH+EG IP+                
Sbjct: 119 CRSLETLNLSNNLIWGTIPDQISLFSSLRVLDFGKNHVEGKIPEGIGALKSLQILNLRSN 178

Query: 56  XFSGKVPSSIFGNLSKLV 3
             SG VPS +F NL++L+
Sbjct: 179 LISGTVPSLVFHNLTELL 196


>ref|XP_002283010.2| PREDICTED: LOW QUALITY PROTEIN: probably inactive leucine-rich
           repeat receptor-like protein kinase At5g06940-like
           [Vitis vinifera]
          Length = 887

 Score =  196 bits (498), Expect = 4e-48
 Identities = 105/189 (55%), Positives = 126/189 (66%)
 Frame = -3

Query: 569 IYLSLFYSVFILRTTNALQETDILITFKTSIEDPLNSLSTWSKNSNTHICNWTGVXXXXX 390
           ++ SL ++ FI+   +A  E +IL+TFK SIEDP+  LSTWS  S TH CNWTGV     
Sbjct: 9   LFFSLTFAFFIV--ASASSEAEILLTFKASIEDPMKYLSTWSNTSETHHCNWTGVTCTTT 66

Query: 389 XXXXXXXXSLNLQGLNLSGEISPSLCQLSSLSHLNLADNLFNQPIPLHLSQCNGLETLNL 210
                    LNLQ LNLSGEIS SLC L +LS+LNLADNLFNQPIPLHLSQC+ LETLNL
Sbjct: 67  PPLSVTS--LNLQSLNLSGEISASLCGLHNLSYLNLADNLFNQPIPLHLSQCSSLETLNL 124

Query: 209 SYNLIWGTIPDQISLFSSLKVLDMSWNHIEGVIPDXXXXXXXXXXXXXXXXXFSGKVPSS 30
           S NLIWGT+P+QIS F SL+ LD S NH+EG IP+                  SG VP S
Sbjct: 125 SNNLIWGTVPEQISQFGSLRTLDFSRNHVEGKIPETIGSLKNLQVLNLGSNLLSGSVP-S 183

Query: 29  IFGNLSKLV 3
           +FGN ++L+
Sbjct: 184 VFGNFTELL 192


>ref|XP_002323303.1| predicted protein [Populus trichocarpa] gi|222867933|gb|EEF05064.1|
           predicted protein [Populus trichocarpa]
          Length = 887

 Score =  191 bits (484), Expect = 2e-46
 Identities = 105/197 (53%), Positives = 125/197 (63%)
 Frame = -3

Query: 593 MATTFKALIYLSLFYSVFILRTTNALQETDILITFKTSIEDPLNSLSTWSKNSNTHICNW 414
           MATT      L L  + F+  T  +  E DIL++FK SI+DP NSLS+WS +SN H CNW
Sbjct: 1   MATTCTYTFALCLSLAFFMCSTAASSTEADILLSFKDSIQDPKNSLSSWSNSSNAHHCNW 60

Query: 413 TGVXXXXXXXXXXXXXSLNLQGLNLSGEISPSLCQLSSLSHLNLADNLFNQPIPLHLSQC 234
           TG+              LNLQ LNLSGEIS S+C L++L  LNLADN FNQPIPLHLSQC
Sbjct: 61  TGITCSTSPSLTVTS--LNLQNLNLSGEISSSICDLTNLGLLNLADNFFNQPIPLHLSQC 118

Query: 233 NGLETLNLSYNLIWGTIPDQISLFSSLKVLDMSWNHIEGVIPDXXXXXXXXXXXXXXXXX 54
           + LE+LN+S NLIWG IPDQIS F SL+VLD S NHIEG IP+                 
Sbjct: 119 SSLESLNVSNNLIWGPIPDQISQFQSLRVLDFSKNHIEGRIPESIGSLVKLQVLNLGSNL 178

Query: 53  FSGKVPSSIFGNLSKLV 3
            SG VP S+F N ++LV
Sbjct: 179 LSGSVP-SVFVNFTELV 194


>ref|XP_002526749.1| Receptor protein kinase CLAVATA1 precursor, putative [Ricinus
           communis] gi|223533938|gb|EEF35663.1| Receptor protein
           kinase CLAVATA1 precursor, putative [Ricinus communis]
          Length = 891

 Score =  189 bits (481), Expect = 3e-46
 Identities = 103/187 (55%), Positives = 123/187 (65%)
 Frame = -3

Query: 563 LSLFYSVFILRTTNALQETDILITFKTSIEDPLNSLSTWSKNSNTHICNWTGVXXXXXXX 384
           LSL  S  +   ++A  E DIL++FK SI+DP N+LS+WS  SN H CNWTGV       
Sbjct: 13  LSLTLSFTLSILSSASTEADILVSFKASIQDPKNALSSWSSGSNVHHCNWTGVTCSSTPS 72

Query: 383 XXXXXXSLNLQGLNLSGEISPSLCQLSSLSHLNLADNLFNQPIPLHLSQCNGLETLNLSY 204
                  LNLQ LNLSGEIS ++CQL++L+ LNLADNLFNQPIPLHLS+C+ L TLNLS 
Sbjct: 73  LVTVTS-LNLQSLNLSGEISSTICQLANLTVLNLADNLFNQPIPLHLSECSSLVTLNLSN 131

Query: 203 NLIWGTIPDQISLFSSLKVLDMSWNHIEGVIPDXXXXXXXXXXXXXXXXXFSGKVPSSIF 24
           NLIWGTIPDQIS F SL+VLD   NHIEG IP+                  SG VP  +F
Sbjct: 132 NLIWGTIPDQISQFKSLEVLDFGRNHIEGKIPESIGSLVNLQVLNLGSNLLSGSVP-FVF 190

Query: 23  GNLSKLV 3
           GN ++LV
Sbjct: 191 GNFTRLV 197


>ref|XP_002330987.1| predicted protein [Populus trichocarpa] gi|222872917|gb|EEF10048.1|
           predicted protein [Populus trichocarpa]
          Length = 883

 Score =  189 bits (480), Expect = 4e-46
 Identities = 103/197 (52%), Positives = 128/197 (64%)
 Frame = -3

Query: 593 MATTFKALIYLSLFYSVFILRTTNALQETDILITFKTSIEDPLNSLSTWSKNSNTHICNW 414
           MATT      L L  + F+  + ++  E D+L++FK SI+DP N+LS+WS NS  H CNW
Sbjct: 1   MATTCTCTFVLCLSLTFFMFSSASST-EADVLLSFKGSIQDPKNTLSSWSSNSTVHYCNW 59

Query: 413 TGVXXXXXXXXXXXXXSLNLQGLNLSGEISPSLCQLSSLSHLNLADNLFNQPIPLHLSQC 234
           TG+              LNLQ LNLSGEIS S+C+L++L+ LNLADN FNQPIPLHLSQC
Sbjct: 60  TGITCTTSPPLTLTS--LNLQSLNLSGEISSSICELTNLALLNLADNFFNQPIPLHLSQC 117

Query: 233 NGLETLNLSYNLIWGTIPDQISLFSSLKVLDMSWNHIEGVIPDXXXXXXXXXXXXXXXXX 54
           + LE+LNLS NLIWG IPDQIS F SL+V D+S NHIEG IP+                 
Sbjct: 118 SSLESLNLSNNLIWGPIPDQISQFHSLRVFDLSKNHIEGRIPESFGLLEKLQVLNLGSNL 177

Query: 53  FSGKVPSSIFGNLSKLV 3
            SG VP S+F NL++LV
Sbjct: 178 LSGSVP-SVFVNLTELV 193


Top