BLASTX nr result

ID: Coptis25_contig00028388 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028388
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322441.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08
gb|AAM29184.1| CDPK-like protein [Solanum tuberosum]                   58   7e-07
ref|XP_002318248.1| predicted protein [Populus trichocarpa] gi|2...    56   4e-06

>ref|XP_002322441.1| predicted protein [Populus trichocarpa] gi|222869437|gb|EEF06568.1|
           predicted protein [Populus trichocarpa]
          Length = 526

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 29/49 (59%), Positives = 38/49 (77%)
 Frame = +2

Query: 113 MAVAESNSYIRSSFCPCNCYRVANLVDTILDTKHIANFEEQYELGDQLG 259
           MAVA+SNS   S   PCNCYRV++L +TILDT  I+N +++Y LG+QLG
Sbjct: 1   MAVAKSNSSRESLKQPCNCYRVSSLTETILDTHQISNLKDRYVLGEQLG 49


>gb|AAM29184.1| CDPK-like protein [Solanum tuberosum]
          Length = 511

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 29/49 (59%), Positives = 34/49 (69%)
 Frame = +2

Query: 113 MAVAESNSYIRSSFCPCNCYRVANLVDTILDTKHIANFEEQYELGDQLG 259
           MAVA+SNS   SSF    CY+VANL  TILD  H AN  ++Y LG+QLG
Sbjct: 1   MAVAKSNSNTESSFYTSCCYKVANLSGTILDASHTANLHDRYILGEQLG 49


>ref|XP_002318248.1| predicted protein [Populus trichocarpa] gi|222858921|gb|EEE96468.1|
           predicted protein [Populus trichocarpa]
          Length = 512

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 25/49 (51%), Positives = 36/49 (73%)
 Frame = +2

Query: 113 MAVAESNSYIRSSFCPCNCYRVANLVDTILDTKHIANFEEQYELGDQLG 259
           MAV +SNS       PCNCYRV++L+++ILDT   +N +++Y LG+QLG
Sbjct: 1   MAVGKSNSSHEPLKQPCNCYRVSSLIESILDTDQTSNLKDRYVLGEQLG 49


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