BLASTX nr result

ID: Coptis25_contig00028385 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028385
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21875.3| unnamed protein product [Vitis vinifera]               73   5e-25
ref|XP_002517887.1| serine-threonine protein kinase, plant-type,...    68   1e-23
ref|XP_003540926.1| PREDICTED: pollen-specific leucine-rich repe...    71   3e-22
ref|XP_003526272.1| PREDICTED: pollen-specific leucine-rich repe...    71   8e-22
gb|AFK41054.1| unknown [Medicago truncatula]                           63   3e-19

>emb|CBI21875.3| unnamed protein product [Vitis vinifera]
          Length = 409

 Score = 72.8 bits (177), Expect(2) = 5e-25
 Identities = 28/50 (56%), Positives = 37/50 (74%)
 Frame = +1

Query: 121 QNLTAEGVAFNDRQNCLPEKKSQRSKKDCEAAYANPIDCFEYHCGDSADG 270
           QNLT+ G+ ++DR+NCLP+K  QRSKK CEA Y +P+DC E+HC     G
Sbjct: 339 QNLTSNGIKYDDRRNCLPDKPLQRSKKQCEAVYKHPVDCLEHHCSGGGGG 388



 Score = 66.6 bits (161), Expect(2) = 5e-25
 Identities = 29/39 (74%), Positives = 33/39 (84%)
 Frame = +3

Query: 3   LEQLDVAHNMMSGVIPAGICSLPNLKNFTFSYNYFCDEE 119
           LEQL + HNMM+G IP GIC LPNL NFTFSYN+FC+EE
Sbjct: 297 LEQLVLGHNMMTGNIPEGICILPNLMNFTFSYNFFCEEE 335


>ref|XP_002517887.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223542869|gb|EEF44405.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 417

 Score = 67.8 bits (164), Expect(2) = 1e-23
 Identities = 27/39 (69%), Positives = 35/39 (89%)
 Frame = +3

Query: 3   LEQLDVAHNMMSGVIPAGICSLPNLKNFTFSYNYFCDEE 119
           LE+L++AHN+MSG +P G+C LPNL NFTFSYN+FC+EE
Sbjct: 295 LERLNLAHNLMSGDVPEGVCILPNLSNFTFSYNFFCEEE 333



 Score = 66.6 bits (161), Expect(2) = 1e-23
 Identities = 28/52 (53%), Positives = 39/52 (75%), Gaps = 2/52 (3%)
 Frame = +1

Query: 124 NLTAEGVAFNDRQNCLPEKKSQRSKKDCEAAYANPIDCFEYHC--GDSADGM 273
           NLT++G+AF+DR+NCLPEK  QRSKK+C+    +P+DC+E  C  G  + GM
Sbjct: 338 NLTSKGIAFDDRRNCLPEKPLQRSKKECDPVLEHPVDCYEQRCVAGSRSGGM 389


>ref|XP_003540926.1| PREDICTED: pollen-specific leucine-rich repeat extensin-like
           protein 3-like [Glycine max]
          Length = 417

 Score = 70.9 bits (172), Expect(2) = 3e-22
 Identities = 28/39 (71%), Positives = 34/39 (87%)
 Frame = +3

Query: 3   LEQLDVAHNMMSGVIPAGICSLPNLKNFTFSYNYFCDEE 119
           LEQL++ HNMMSG +P G+C LPNL NFTFSYN+FC+EE
Sbjct: 297 LEQLNLGHNMMSGTVPVGVCELPNLANFTFSYNFFCEEE 335



 Score = 59.3 bits (142), Expect(2) = 3e-22
 Identities = 24/44 (54%), Positives = 34/44 (77%)
 Frame = +1

Query: 121 QNLTAEGVAFNDRQNCLPEKKSQRSKKDCEAAYANPIDCFEYHC 252
           QNLT++ + F+DR+NCLPEK  QRS+K+C+A   +P+DC E  C
Sbjct: 339 QNLTSKRIVFDDRRNCLPEKPLQRSEKECKAKLEHPVDCSELCC 382


>ref|XP_003526272.1| PREDICTED: pollen-specific leucine-rich repeat extensin-like
           protein 3-like [Glycine max]
          Length = 419

 Score = 70.9 bits (172), Expect(2) = 8e-22
 Identities = 28/39 (71%), Positives = 34/39 (87%)
 Frame = +3

Query: 3   LEQLDVAHNMMSGVIPAGICSLPNLKNFTFSYNYFCDEE 119
           LEQL++ HNMMSG +P G+C LPNL NFTFSYN+FC+EE
Sbjct: 298 LEQLNLGHNMMSGTVPVGVCELPNLANFTFSYNFFCEEE 336



 Score = 57.8 bits (138), Expect(2) = 8e-22
 Identities = 23/44 (52%), Positives = 34/44 (77%)
 Frame = +1

Query: 121 QNLTAEGVAFNDRQNCLPEKKSQRSKKDCEAAYANPIDCFEYHC 252
           +NLT++ + F+DR+NCLPEK  QRS+K+C+A   +P+DC E  C
Sbjct: 340 KNLTSKRIVFDDRRNCLPEKPLQRSEKECKAKLEHPVDCSELCC 383


>gb|AFK41054.1| unknown [Medicago truncatula]
          Length = 116

 Score = 62.8 bits (151), Expect(2) = 3e-19
 Identities = 26/50 (52%), Positives = 37/50 (74%)
 Frame = +1

Query: 121 QNLTAEGVAFNDRQNCLPEKKSQRSKKDCEAAYANPIDCFEYHCGDSADG 270
           +NLT++ +AF+DR+NCLPEK  QRS+K+C A   +P+DCFE  C +   G
Sbjct: 34  ENLTSKKIAFDDRRNCLPEKALQRSEKECSAKLEHPVDCFELCCVEGGLG 83



 Score = 57.4 bits (137), Expect(2) = 3e-19
 Identities = 22/30 (73%), Positives = 27/30 (90%)
 Frame = +3

Query: 30  MMSGVIPAGICSLPNLKNFTFSYNYFCDEE 119
           M+SG++P GIC LPNL NFTFSYN+FC+EE
Sbjct: 1   MISGIVPVGICELPNLVNFTFSYNFFCEEE 30


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