BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028384
         (865 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]   131   2e-28
ref|XP_002890193.1| F-box family protein [Arabidopsis lyrata sub...   113   6e-23
ref|XP_002331321.1| predicted protein [Populus trichocarpa] gi|2...   108   2e-21
emb|CBI32913.3| unnamed protein product [Vitis vinifera]              108   2e-21
ref|XP_003588676.1| F-box/FBD/LRR-repeat protein [Medicago trunc...   107   3e-21

>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score =  131 bits (330), Expect = 2e-28
 Identities = 90/263 (34%), Positives = 130/263 (49%), Gaps = 3/263 (1%)
 Frame = -2

Query: 789 YPHLRDKISYIHSSILHRIFSLLDLKHAVQCSVLSHRWRYFWTTLPILNINAQIFCDLLK 610
           Y   RD IS +   +L  I S L  K AV  S+LS RWRY W ++PIL+ + +++ +   
Sbjct: 5   YEESRDIISNLPDELLCHILSFLPTKFAVGTSILSKRWRYLWASVPILDFDDELWLN-PS 63

Query: 609 KKVNWRWKECLFVEYVDQVLLLHRMSSIERFHLCYNGCCCDVATLRFYSWIRALVRRNVQ 430
             V    +  +F  +VD VL    +S I++F L Y     D      YSWI   + R VQ
Sbjct: 64  TLVELEERIIMFQNFVDGVLRHSEVSCIKKFRLGYRDNNLD----SVYSWICIALERRVQ 119

Query: 429 ELDIDISTSRLPPLPLCLFTCESLTVLKLNFGCWQYPLVLPDLISLPALKTLHLKSIRFK 250
           ELD+ +       LP   F C++L V+KL+   +   L +P  + LP+LK LHLKS+ + 
Sbjct: 120 ELDLHLLIDWRVELPPMFFICKTLVVVKLSCALF---LDIPTTVWLPSLKALHLKSVEYS 176

Query: 249 NDNLTSNFLSSCPVLELLIIMHSELAGMNNLTIYCSELKHLVIETYSYDGEH---DEPVH 79
           +D+     LS CPVLE L+I   E      + +    LK L I  ++    H    E   
Sbjct: 177 DDDSIQKLLSGCPVLEELVIEREERDNQWVVNVSNPSLKILRIFFFTDGFAHPYEQEDQD 236

Query: 78  CKIKIYAPKLVSFRCKDYMGKDY 10
            K+ + AP L      DY+ KDY
Sbjct: 237 YKVVVDAPNLEYLSITDYLSKDY 259


>ref|XP_002890193.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297336035|gb|EFH66452.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 452

 Score =  113 bits (282), Expect = 6e-23
 Identities = 82/263 (31%), Positives = 129/263 (49%), Gaps = 8/263 (3%)
 Frame = -2

Query: 774 DKISYIHSSILHRIFSLLDLKHAVQCSVLSHRWRYFWTTLPILNINAQIFCDLLKKKVNW 595
           D+IS +  S+L +I S L  K +V  SVLS RWR  W  +P L++++  F D        
Sbjct: 15  DRISNLPDSLLCQILSDLSTKESVCTSVLSKRWRSLWLHVPALDLDSNNFPD-------- 66

Query: 594 RWKECLFVEYVDQVLLLHRMSSIERFHLCYNGCCCDVATLRFYSWIRALVRRNV------ 433
              + +FV +V++ L+      +ERF L Y     D +  RF SWI A+++R V      
Sbjct: 67  ---DDVFVSFVNRFLVSENEQHLERFKLIYEVNEHDAS--RFKSWINAVIKRRVCHFNVH 121

Query: 432 QELDIDISTSRLPPLPLCLFTCESLTVLKLNFGCWQYPLVL--PDLISLPALKTLHLKSI 259
            E+D D     L  +PL L++CESL  L+L      Y +VL  P+ +SLP +K +HL  +
Sbjct: 122 NEVDDDDDDDELFKMPLSLYSCESLVNLQL------YRVVLDHPESVSLPCVKIMHLDMV 175

Query: 258 RFKNDNLTSNFLSSCPVLELLIIMHSELAGMNNLTIYCSELKHLVIETYSYDGEHDEPVH 79
           ++  D+     +S C VLE L I+      +  + +    LK   IE   Y+ E+     
Sbjct: 176 KYDADSTLERLISGCSVLEELTIVRDPNDSLQVVCVRSKSLKSFKIECERYESENH---- 231

Query: 78  CKIKIYAPKLVSFRCKDYMGKDY 10
             ++I AP+L      D+    +
Sbjct: 232 -VVEIDAPRLEYMNLCDHRSDSF 253


>ref|XP_002331321.1| predicted protein [Populus trichocarpa] gi|222873904|gb|EEF11035.1|
           predicted protein [Populus trichocarpa]
          Length = 378

 Score =  108 bits (270), Expect = 2e-21
 Identities = 83/249 (33%), Positives = 123/249 (49%), Gaps = 3/249 (1%)
 Frame = -2

Query: 774 DKISYIHSSILHRIFSLLDLKHAVQCSVLSHRWRYFWTTLPILNINAQIFCDLLKKKVNW 595
           D+IS + + +LHRI S +D    VQ  VLS RW   W + P L+ N + F  L+     +
Sbjct: 16  DRISTLPNVLLHRILSFVDAVQVVQTCVLSKRWMNVWKSHPYLDFNFETFSSLINSDY-Y 74

Query: 594 RWKECLFVEYVDQVLL-LHRMSSIE-RFHLCYNGCCCDVATLRFYSWIRALVRRNVQELD 421
             +   F ++++QVL+  +   +I+    LC +     V +L +Y+     V+ + +E+ 
Sbjct: 75  EDEMVNFTDFINQVLVRRNNFKAIKISLDLCGHTRYSLVESLIYYA-----VKHHAEEIC 129

Query: 420 IDISTSRLP-PLPLCLFTCESLTVLKLNFGCWQYPLVLPDLISLPALKTLHLKSIRFKND 244
           ID +   +P  LP C F CESL  LKL        + LP  + LP+LKTLHL   +    
Sbjct: 130 IDTACRDVPIVLPRCFFNCESLRSLKLRI---DGGIALPKSLGLPSLKTLHLGGAQ---- 182

Query: 243 NLTSNFLSSCPVLELLIIMHSELAGMNNLTIYCSELKHLVIETYSYDGEHDEPVHCKIKI 64
           N      SSCP LE L I    L  + N  I+   LK L I  + Y         CK+ +
Sbjct: 183 NFDGKIFSSCPNLENLTIEDICLNTIENFNIHALNLKSLEILNWRYSRIMR---GCKVML 239

Query: 63  YAPKLVSFR 37
           +APKL SF+
Sbjct: 240 FAPKLTSFK 248


>emb|CBI32913.3| unnamed protein product [Vitis vinifera]
          Length = 348

 Score =  108 bits (269), Expect = 2e-21
 Identities = 81/263 (30%), Positives = 123/263 (46%), Gaps = 3/263 (1%)
 Frame = -2

Query: 789 YPHLRDKISYIHSSILHRIFSLLDLKHAVQCSVLSHRWRYFWTTLPILNINAQIFCDLLK 610
           Y   RD IS +   +L  I S L  K AV  S+LS RWRY W ++PIL+ + +++ +   
Sbjct: 5   YEESRDIISNLPDELLCHILSFLPTKFAVGTSILSKRWRYLWASVPILDFDDELWLN-PS 63

Query: 609 KKVNWRWKECLFVEYVDQVLLLHRMSSIERFHLCYNGCCCDVATLRFYSWIRALVRRNVQ 430
             V    +  +F  +VD VL    +S I++F L Y                        +
Sbjct: 64  TLVELEERIIMFQNFVDGVLRHSEVSCIKKFRLGY------------------------R 99

Query: 429 ELDIDISTSRLPPLPLCLFTCESLTVLKLNFGCWQYPLVLPDLISLPALKTLHLKSIRFK 250
           + ++D     LPP+    F C++L V+KL+   +   L +P  + LP+LK LHLKS+ + 
Sbjct: 100 DNNLDNWGVELPPM---FFICKTLVVVKLSCALF---LDIPTTVWLPSLKALHLKSVEYS 153

Query: 249 NDNLTSNFLSSCPVLELLIIMHSELAGMNNLTIYCSELKHLVIETYSYDGEH---DEPVH 79
           +D+     LS CPVLE L+I   E      + +    LK L I  ++    H    E   
Sbjct: 154 DDDSIQKLLSGCPVLEELVIEREERDNQWVVNVSNPSLKILRIFFFTDGFAHPYEQEDQD 213

Query: 78  CKIKIYAPKLVSFRCKDYMGKDY 10
            K+ + AP L      DY+ KDY
Sbjct: 214 YKVVVDAPNLEYLSITDYLSKDY 236


>ref|XP_003588676.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355477724|gb|AES58927.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 428

 Score =  107 bits (268), Expect = 3e-21
 Identities = 76/228 (33%), Positives = 121/228 (53%), Gaps = 4/228 (1%)
 Frame = -2

Query: 774 DKISYIHSSILHRIFSLLDLKHAVQCSVLSHRWRYFWTTLPILNINAQIFCDLLKKKVNW 595
           D+ISY+   ++ +I S L ++ AV+ SVLS++WRY W T+P L  + Q      K    +
Sbjct: 7   DRISYLLGDVIDKILSHLPIREAVRTSVLSNKWRYKWATIPNLVFDKQCVSATSKCSELF 66

Query: 594 RWKECLFVEYVDQVLLLHRMSSIERFHLCYNGCCCDVATLRFYSWIRALVRRNVQELDID 415
              E   +E +DQVLLL+    I +F +   G    ++      WI  L +R+++EL + 
Sbjct: 67  LDMEGKLMEIIDQVLLLY-SGPINKFQISRCGVNL-ISETALDRWIFHLTKRSIKELVLQ 124

Query: 414 ISTSRLPPLPLCLFTCESLTVLKLNFGCWQYPLVLPDLISLPALKTLHLKSIRFKNDNLT 235
           IS  +L  +P CLF+C+SL  L L +   + P  +  L +L +L   H+   ++  +NL 
Sbjct: 125 ISERKLYKIPWCLFSCQSLHHLTLYYCLLKPPSTIEGLKNLKSLDLDHVSMSQYAFENL- 183

Query: 234 SNFLSSCPVLELLIIMHSELAGMNNLTIYCSELKHLVI----ETYSYD 103
              +SSCP+LE L +  +EL G   + I+   LK L I    E  S+D
Sbjct: 184 ---ISSCPLLENLTL--TELDGFTQINIHAPNLKVLDICGKFEDISFD 226