BLASTX nr result

ID: Coptis25_contig00028381 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028381
         (688 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323104.1| predicted protein [Populus trichocarpa] gi|2...    92   7e-17
ref|XP_003521678.1| PREDICTED: unknown protein 1-like [Glycine max]    91   2e-16
gb|ACU23123.1| unknown [Glycine max]                                   87   2e-15
ref|XP_003548337.1| PREDICTED: unknown protein 1-like [Glycine max]    86   9e-15
ref|XP_003632556.1| PREDICTED: unknown protein 1-like [Vitis vin...    81   2e-13

>ref|XP_002323104.1| predicted protein [Populus trichocarpa] gi|222867734|gb|EEF04865.1|
           predicted protein [Populus trichocarpa]
          Length = 214

 Score = 92.4 bits (228), Expect = 7e-17
 Identities = 68/185 (36%), Positives = 97/185 (52%), Gaps = 11/185 (5%)
 Frame = -2

Query: 612 KIDELVFPTPERNKDEAVIINSSTPIDQDIISPRTPKGCFLFDPFAP--HNLILPPRVHK 439
           K+ +++  T + N+ E    N S        SPRTPK   +FDPFAP   + IL P+  K
Sbjct: 51  KLPKVLSFTSKTNRSEDHFDNFS--------SPRTPKDG-VFDPFAPGHEDKILAPQCKK 101

Query: 438 FLTDSNLRVARRLNFAASSNDIVKG-----VVMLEEEQVLLDKMYKSLFDFIVAKQVEG- 277
           +  ++   V RRLNF +S   +  G     V  L +E+ + + +Y+SL + IV+KQ EG 
Sbjct: 102 YNDEARASVVRRLNFTSSFRALRNGSFGDDVEFLSDEE-MFESVYESLLEAIVSKQTEGA 160

Query: 276 ---LXXXXVEKDGFETPPKCGLLSGVADTCPAAPRKARLDGMERVEGVGLDFKRIDMGLC 106
              +     + D   TPP   +L+GV DTCPAAP K +  G  R+         ID+GLC
Sbjct: 161 LEEMTKLEWDSDDCTTPPAAPILTGVPDTCPAAPLKRK--GKSRI---------IDLGLC 209

Query: 105 RKLNF 91
           RKL F
Sbjct: 210 RKLEF 214


>ref|XP_003521678.1| PREDICTED: unknown protein 1-like [Glycine max]
          Length = 190

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 56/145 (38%), Positives = 79/145 (54%), Gaps = 2/145 (1%)
 Frame = -2

Query: 519 SPRTPKGCFLFDPFAP--HNLILPPRVHKFLTDSNLRVARRLNFAASSNDIVKGVVMLEE 346
           SPRTPK   +FDPFAP   N+ L P  +K+L +    VARRL+F  S + + + V     
Sbjct: 60  SPRTPKDG-VFDPFAPGPDNMALAPNSNKYLDEYRTTVARRLDFHPSFDVVAQAVTDTLS 118

Query: 345 EQVLLDKMYKSLFDFIVAKQVEGLXXXXVEKDGFETPPKCGLLSGVADTCPAAPRKARLD 166
           ++ +++ +Y++L   IV+KQ EG+       D  ETPP     SG+ADTCP AP K    
Sbjct: 119 DEEMVESVYENLLQVIVSKQAEGVLAQM--SDDCETPPSVLHFSGIADTCPGAPIKPAAK 176

Query: 165 GMERVEGVGLDFKRIDMGLCRKLNF 91
                       + ID+GLC+KL F
Sbjct: 177 P-----------RNIDLGLCKKLEF 190


>gb|ACU23123.1| unknown [Glycine max]
          Length = 190

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 55/145 (37%), Positives = 78/145 (53%), Gaps = 2/145 (1%)
 Frame = -2

Query: 519 SPRTPKGCFLFDPFAP--HNLILPPRVHKFLTDSNLRVARRLNFAASSNDIVKGVVMLEE 346
           SPRTPK   +FDPFAP   N+ L P  +K+L +    VARRL+F  S + + + V     
Sbjct: 60  SPRTPKDG-VFDPFAPGPDNMALAPNSNKYLDEYRTTVARRLDFHPSFDVVAQAVTDTLS 118

Query: 345 EQVLLDKMYKSLFDFIVAKQVEGLXXXXVEKDGFETPPKCGLLSGVADTCPAAPRKARLD 166
           ++ +++ + ++L   IV+KQ EG+       D  ETPP     SG+ADTCP AP K    
Sbjct: 119 DEEMVESVCENLLQVIVSKQAEGVLAQM--SDDCETPPSVLHFSGIADTCPGAPIKPAAK 176

Query: 165 GMERVEGVGLDFKRIDMGLCRKLNF 91
                       + ID+GLC+KL F
Sbjct: 177 P-----------RNIDLGLCKKLEF 190


>ref|XP_003548337.1| PREDICTED: unknown protein 1-like [Glycine max]
          Length = 191

 Score = 85.5 bits (210), Expect = 9e-15
 Identities = 57/164 (34%), Positives = 84/164 (51%), Gaps = 2/164 (1%)
 Frame = -2

Query: 576 NKDEAVIINSSTPIDQDIISPRTPKGCFLFDPFAP--HNLILPPRVHKFLTDSNLRVARR 403
           + D A++ N++     DI  PRTPK   +FDPFAP   N+   P  +K+L +    VARR
Sbjct: 46  DSDRALVDNNNN----DIGIPRTPKDG-VFDPFAPGPDNMARAPNSNKYLDEYRTTVARR 100

Query: 402 LNFAASSNDIVKGVVMLEEEQVLLDKMYKSLFDFIVAKQVEGLXXXXVEKDGFETPPKCG 223
           L+F  S + + +       ++ +++ +Y++L   IV+KQ EG        D  ETPP   
Sbjct: 101 LDFHPSFDVVAEADSDTLSDEKMVESVYENLLQVIVSKQAEGALAQM--SDDCETPPSVL 158

Query: 222 LLSGVADTCPAAPRKARLDGMERVEGVGLDFKRIDMGLCRKLNF 91
             +G+ADTCP AP K                + ID GLC+KL F
Sbjct: 159 RFTGIADTCPGAPMKPAAKP-----------RNIDFGLCKKLEF 191


>ref|XP_003632556.1| PREDICTED: unknown protein 1-like [Vitis vinifera]
          Length = 237

 Score = 81.3 bits (199), Expect = 2e-13
 Identities = 60/154 (38%), Positives = 78/154 (50%), Gaps = 11/154 (7%)
 Frame = -2

Query: 519 SPRTPKGCFLFDPFAP--HNLILPPRVHKFLTDSNLRVARRLNFAA---SSNDIVKG--V 361
           SP TPKG  +FDPFAP    L + P   K L      VAR L+F++   S  D + G   
Sbjct: 91  SPYTPKGD-VFDPFAPGPEELAMAPLCKKRLCKPWASVARHLDFSSAIESEEDEIFGSDA 149

Query: 360 VMLEEEQVLLDKMYKSLFDFIVAKQVE----GLXXXXVEKDGFETPPKCGLLSGVADTCP 193
             L +E+ LL+ +Y SL + IV  Q E    G+     + DGF+TP     L+GVA+TCP
Sbjct: 150 DTLSDEETLLESVYGSLLEAIVFNQTEEVFSGISSPDSDSDGFKTPTSAPHLNGVAETCP 209

Query: 192 AAPRKARLDGMERVEGVGLDFKRIDMGLCRKLNF 91
            AP K                + ID GLCRKL+F
Sbjct: 210 GAPLKPT-----------TKLRIIDKGLCRKLDF 232


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