BLASTX nr result
ID: Coptis25_contig00028374
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00028374 (464 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002269867.1| PREDICTED: pentatricopeptide repeat-containi... 219 1e-55 emb|CAN67349.1| hypothetical protein VITISV_018089 [Vitis vinifera] 219 1e-55 ref|XP_003531639.1| PREDICTED: pentatricopeptide repeat-containi... 210 1e-52 ref|XP_002530223.1| pentatricopeptide repeat-containing protein,... 209 2e-52 ref|XP_002320514.1| predicted protein [Populus trichocarpa] gi|2... 206 2e-51 >ref|XP_002269867.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680, mitochondrial-like [Vitis vinifera] Length = 616 Score = 219 bits (559), Expect = 1e-55 Identities = 105/154 (68%), Positives = 129/154 (83%) Frame = +2 Query: 2 LYEEMLVHGVKADIVTYNALILGLCKEGKTKNAAYLVKELDKENLVPNASTFSNLIMGQC 181 L++EML +G+KADI+TYNALILGLC EG+TK AAYLVKELD+ENLVPN+STFS LI GQC Sbjct: 441 LHDEMLRNGIKADILTYNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTFSALITGQC 500 Query: 182 VRQNSERAFQIYKSMKKSGCHPNSNTFKMLISTFCKNDDFDGAVQVLNEMMERCLTPESG 361 VR+NSERAFQ+YKSM +SGCHPN +TFKMLISTFCKN+DFDGAV+V+ EM ER + P+S Sbjct: 501 VRKNSERAFQLYKSMIRSGCHPNYHTFKMLISTFCKNEDFDGAVEVVREMSERSIAPDSD 560 Query: 362 LLVELCEGLRRYRKFNLATKVCTDLQRRRLLPKG 463 L ELC GL K LA K+C +++ + L+P+G Sbjct: 561 TLSELCRGLWLSGKEELALKLCKEMEMKHLMPEG 594 Score = 60.5 bits (145), Expect = 1e-07 Identities = 30/118 (25%), Positives = 57/118 (48%) Frame = +2 Query: 5 YEEMLVHGVKADIVTYNALILGLCKEGKTKNAAYLVKELDKENLVPNASTFSNLIMGQCV 184 Y EM + + ++ T N ++ CK GK + A + K ++ P ++++ LI G C Sbjct: 302 YREMQRYRISPNVYTLNMVMCAFCKWGKLEKAIEVFKRMETMGFSPTITSYNTLIAGYCN 361 Query: 185 RQNSERAFQIYKSMKKSGCHPNSNTFKMLISTFCKNDDFDGAVQVLNEMMERCLTPES 358 + ++ M+K+G P+ TF LI+ FC+ A ++ +EM + P + Sbjct: 362 KGLLNSGMKLKILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNT 419 Score = 55.8 bits (133), Expect = 3e-06 Identities = 38/152 (25%), Positives = 69/152 (45%) Frame = +2 Query: 2 LYEEMLVHGVKADIVTYNALILGLCKEGKTKNAAYLVKELDKENLVPNASTFSNLIMGQC 181 +++ M G I +YN LI G C +G + L ++K + P+ TF+ LI G C Sbjct: 336 VFKRMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLKILMEKNGVRPDDVTFNTLINGFC 395 Query: 182 VRQNSERAFQIYKSMKKSGCHPNSNTFKMLISTFCKNDDFDGAVQVLNEMMERCLTPESG 361 A +I+ MK + PN+ T+ LI+ + + + + ++ +EM+ + + Sbjct: 396 RGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQVGNSEMGGRLHDEMLRNGIKADIL 455 Query: 362 LLVELCEGLRRYRKFNLATKVCTDLQRRRLLP 457 L GL + A + +L R L+P Sbjct: 456 TYNALILGLCMEGRTKKAAYLVKELDRENLVP 487 >emb|CAN67349.1| hypothetical protein VITISV_018089 [Vitis vinifera] Length = 483 Score = 219 bits (559), Expect = 1e-55 Identities = 105/154 (68%), Positives = 129/154 (83%) Frame = +2 Query: 2 LYEEMLVHGVKADIVTYNALILGLCKEGKTKNAAYLVKELDKENLVPNASTFSNLIMGQC 181 L++EML +G+KADI+TYNALILGLC EG+TK AAYLVKELD+ENLVPN+STFS LI GQC Sbjct: 308 LHDEMLRNGIKADILTYNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTFSALITGQC 367 Query: 182 VRQNSERAFQIYKSMKKSGCHPNSNTFKMLISTFCKNDDFDGAVQVLNEMMERCLTPESG 361 VR+NSERAFQ+YKSM +SGCHPN +TFKMLISTFCKN+DFDGAV+V+ EM ER + P+S Sbjct: 368 VRKNSERAFQLYKSMIRSGCHPNYHTFKMLISTFCKNEDFDGAVEVVREMSERSIAPDSD 427 Query: 362 LLVELCEGLRRYRKFNLATKVCTDLQRRRLLPKG 463 L ELC GL K LA K+C +++ + L+P+G Sbjct: 428 TLSELCRGLWLSGKEELALKLCKEMEMKHLMPEG 461 Score = 60.8 bits (146), Expect = 1e-07 Identities = 30/118 (25%), Positives = 58/118 (49%) Frame = +2 Query: 5 YEEMLVHGVKADIVTYNALILGLCKEGKTKNAAYLVKELDKENLVPNASTFSNLIMGQCV 184 Y EM + + ++ T N ++ CK GK + A + K+++ P ++++ LI G C Sbjct: 169 YREMQRYRISPNVYTLNMVMCAFCKWGKLEKAIEVFKKMETMGFSPTITSYNTLIAGYCN 228 Query: 185 RQNSERAFQIYKSMKKSGCHPNSNTFKMLISTFCKNDDFDGAVQVLNEMMERCLTPES 358 + ++ M+K+G P+ TF LI+ FC+ A ++ +EM + P + Sbjct: 229 KGLLNSGMKLKILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNT 286 Score = 56.2 bits (134), Expect = 3e-06 Identities = 38/152 (25%), Positives = 70/152 (46%) Frame = +2 Query: 2 LYEEMLVHGVKADIVTYNALILGLCKEGKTKNAAYLVKELDKENLVPNASTFSNLIMGQC 181 ++++M G I +YN LI G C +G + L ++K + P+ TF+ LI G C Sbjct: 203 VFKKMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLKILMEKNGVRPDDVTFNTLINGFC 262 Query: 182 VRQNSERAFQIYKSMKKSGCHPNSNTFKMLISTFCKNDDFDGAVQVLNEMMERCLTPESG 361 A +I+ MK + PN+ T+ LI+ + + + + ++ +EM+ + + Sbjct: 263 RGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQVGNSEMGGRLHDEMLRNGIKADIL 322 Query: 362 LLVELCEGLRRYRKFNLATKVCTDLQRRRLLP 457 L GL + A + +L R L+P Sbjct: 323 TYNALILGLCMEGRTKKAAYLVKELDRENLVP 354 >ref|XP_003531639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680, mitochondrial-like isoform 1 [Glycine max] gi|356526065|ref|XP_003531640.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680, mitochondrial-like isoform 2 [Glycine max] Length = 522 Score = 210 bits (534), Expect = 1e-52 Identities = 102/154 (66%), Positives = 125/154 (81%) Frame = +2 Query: 2 LYEEMLVHGVKADIVTYNALILGLCKEGKTKNAAYLVKELDKENLVPNASTFSNLIMGQC 181 +YEEM+ +G+KADI+TYNALILGLCK+GKTK AA V+ELDKENLVPNASTFS LI GQC Sbjct: 352 VYEEMMRNGLKADILTYNALILGLCKDGKTKKAAGFVRELDKENLVPNASTFSALITGQC 411 Query: 182 VRQNSERAFQIYKSMKKSGCHPNSNTFKMLISTFCKNDDFDGAVQVLNEMMERCLTPESG 361 VR NSERAF IY+SM +SGC PN TF+MLIS FCKN+DFDGAVQVL +M+ R ++P+ Sbjct: 412 VRNNSERAFLIYRSMVRSGCSPNGQTFQMLISAFCKNEDFDGAVQVLRDMLGRLMSPDLS 471 Query: 362 LLVELCEGLRRYRKFNLATKVCTDLQRRRLLPKG 463 + ELC+GL R K LA +C++++ RRLLP G Sbjct: 472 TMSELCDGLCRCGKNQLALALCSEMEVRRLLPDG 505 Score = 64.3 bits (155), Expect = 1e-08 Identities = 46/153 (30%), Positives = 74/153 (48%), Gaps = 1/153 (0%) Frame = +2 Query: 2 LYEEMLVHGVKADIVTYNALILGLCKEGKTKNAAYLVKELDKENLV-PNASTFSNLIMGQ 178 + E+M+ G+ ++V++N LI G C +G A VK L EN V PN TF+ LI G Sbjct: 247 MLEKMMDMGLSPNVVSFNTLISGYCNKG-LFGLALKVKSLMVENGVQPNVVTFNTLINGF 305 Query: 179 CVRQNSERAFQIYKSMKKSGCHPNSNTFKMLISTFCKNDDFDGAVQVLNEMMERCLTPES 358 C + A +++ MK + P+ T+ L++ + + D + V+V EMM L + Sbjct: 306 CKERKLHEANRVFNEMKVANVDPSVVTYNTLLNGYGQVGDSEMGVRVYEEMMRNGLKADI 365 Query: 359 GLLVELCEGLRRYRKFNLATKVCTDLQRRRLLP 457 L GL + K A +L + L+P Sbjct: 366 LTYNALILGLCKDGKTKKAAGFVRELDKENLVP 398 Score = 63.9 bits (154), Expect = 1e-08 Identities = 36/124 (29%), Positives = 62/124 (50%) Frame = +2 Query: 14 MLVHGVKADIVTYNALILGLCKEGKTKNAAYLVKELDKENLVPNASTFSNLIMGQCVRQN 193 M+ +GV+ ++VT+N LI G CKE K A + E+ N+ P+ T++ L+ G + Sbjct: 286 MVENGVQPNVVTFNTLINGFCKERKLHEANRVFNEMKVANVDPSVVTYNTLLNGYGQVGD 345 Query: 194 SERAFQIYKSMKKSGCHPNSNTFKMLISTFCKNDDFDGAVQVLNEMMERCLTPESGLLVE 373 SE ++Y+ M ++G + T+ LI CK+ A + E+ + L P + Sbjct: 346 SEMGVRVYEEMMRNGLKADILTYNALILGLCKDGKTKKAAGFVRELDKENLVPNASTFSA 405 Query: 374 LCEG 385 L G Sbjct: 406 LITG 409 Score = 57.8 bits (138), Expect = 9e-07 Identities = 37/141 (26%), Positives = 62/141 (43%) Frame = +2 Query: 29 VKADIVTYNALILGLCKEGKTKNAAYLVKELDKENLVPNASTFSNLIMGQCVRQNSERAF 208 V ++ T N +I C G+ + +++++ L PN +F+ LI G C + A Sbjct: 221 VSPNVYTLNMIIRAYCMLGEVQKGFDMLEKMMDMGLSPNVVSFNTLISGYCNKGLFGLAL 280 Query: 209 QIYKSMKKSGCHPNSNTFKMLISTFCKNDDFDGAVQVLNEMMERCLTPESGLLVELCEGL 388 ++ M ++G PN TF LI+ FCK A +V NEM + P L G Sbjct: 281 KVKSLMVENGVQPNVVTFNTLINGFCKERKLHEANRVFNEMKVANVDPSVVTYNTLLNGY 340 Query: 389 RRYRKFNLATKVCTDLQRRRL 451 + + +V ++ R L Sbjct: 341 GQVGDSEMGVRVYEEMMRNGL 361 >ref|XP_002530223.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223530270|gb|EEF32170.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 517 Score = 209 bits (532), Expect = 2e-52 Identities = 103/154 (66%), Positives = 122/154 (79%) Frame = +2 Query: 2 LYEEMLVHGVKADIVTYNALILGLCKEGKTKNAAYLVKELDKENLVPNASTFSNLIMGQC 181 LYEEM +GVKADI+TYNALILGLCKEGKTK AAY+VKELDKENLVPNASTFS LI GQC Sbjct: 343 LYEEMSRNGVKADILTYNALILGLCKEGKTKKAAYMVKELDKENLVPNASTFSALISGQC 402 Query: 182 VRQNSERAFQIYKSMKKSGCHPNSNTFKMLISTFCKNDDFDGAVQVLNEMMERCLTPESG 361 +R NS+RAFQ+YKSM + GCHPN TF ML+S FCKN+DF+GA VL EM ERC TP S Sbjct: 403 IRNNSDRAFQLYKSMVRIGCHPNEQTFNMLVSAFCKNEDFEGAFLVLMEMFERCFTPGSD 462 Query: 362 LLVELCEGLRRYRKFNLATKVCTDLQRRRLLPKG 463 +L E+ GL K +LA K+ ++L+ R ++ KG Sbjct: 463 VLSEIYHGLCCCGKEHLAMKLSSELKARHMMTKG 496 Score = 67.0 bits (162), Expect = 1e-09 Identities = 38/146 (26%), Positives = 68/146 (46%) Frame = +2 Query: 5 YEEMLVHGVKADIVTYNALILGLCKEGKTKNAAYLVKELDKENLVPNASTFSNLIMGQCV 184 Y+EM + ++ T N ++ CK GK + A + +E++ + PN ++++ LIMG C Sbjct: 204 YKEMRRCRISPNVYTRNMVMRAFCKSGKLEKAVQVFEEMESVGISPNDTSYNTLIMGYCR 263 Query: 185 RQNSERAFQIYKSMKKSGCHPNSNTFKMLISTFCKNDDFDGAVQVLNEMMERCLTPESGL 364 + A ++ SM+ G N TF LI FCK A +V +EM + P + Sbjct: 264 KGLLNSAVKLKNSMRAKGVEANVVTFNSLIDGFCKEGKLHEASKVFSEMKVLNVAPNTIT 323 Query: 365 LVELCEGLRRYRKFNLATKVCTDLQR 442 L G + + ++ ++ R Sbjct: 324 YNTLINGHSQMGNSEMGRRLYEEMSR 349 Score = 59.7 bits (143), Expect = 2e-07 Identities = 38/152 (25%), Positives = 70/152 (46%) Frame = +2 Query: 2 LYEEMLVHGVKADIVTYNALILGLCKEGKTKNAAYLVKELDKENLVPNASTFSNLIMGQC 181 ++EEM G+ + +YN LI+G C++G +A L + + + N TF++LI G C Sbjct: 238 VFEEMESVGISPNDTSYNTLIMGYCRKGLLNSAVKLKNSMRAKGVEANVVTFNSLIDGFC 297 Query: 182 VRQNSERAFQIYKSMKKSGCHPNSNTFKMLISTFCKNDDFDGAVQVLNEMMERCLTPESG 361 A +++ MK PN+ T+ LI+ + + + ++ EM + + Sbjct: 298 KEGKLHEASKVFSEMKVLNVAPNTITYNTLINGHSQMGNSEMGRRLYEEMSRNGVKADIL 357 Query: 362 LLVELCEGLRRYRKFNLATKVCTDLQRRRLLP 457 L GL + K A + +L + L+P Sbjct: 358 TYNALILGLCKEGKTKKAAYMVKELDKENLVP 389 >ref|XP_002320514.1| predicted protein [Populus trichocarpa] gi|222861287|gb|EEE98829.1| predicted protein [Populus trichocarpa] Length = 478 Score = 206 bits (523), Expect = 2e-51 Identities = 99/153 (64%), Positives = 124/153 (81%) Frame = +2 Query: 2 LYEEMLVHGVKADIVTYNALILGLCKEGKTKNAAYLVKELDKENLVPNASTFSNLIMGQC 181 +YEEM+ +GVKADI+TYNALILGLCKEGKTK AA+LVKELDKENLVPNAST+S LI GQC Sbjct: 326 VYEEMMRNGVKADILTYNALILGLCKEGKTKKAAFLVKELDKENLVPNASTYSALISGQC 385 Query: 182 VRQNSERAFQIYKSMKKSGCHPNSNTFKMLISTFCKNDDFDGAVQVLNEMMERCLTPESG 361 R+NS+RAFQ+YKSM +SGCHPN TFKML S F KN+DF+GA VL +M R + +S Sbjct: 386 ARKNSDRAFQLYKSMVRSGCHPNEQTFKMLTSAFVKNEDFEGAFNVLMDMFARSMASDSN 445 Query: 362 LLVELCEGLRRYRKFNLATKVCTDLQRRRLLPK 460 L+E+ +GL + K NLA K+C +++ RRL+P+ Sbjct: 446 TLLEIYDGLCQCGKENLAMKLCHEMEARRLIPE 478 Score = 74.7 bits (182), Expect = 7e-12 Identities = 43/146 (29%), Positives = 70/146 (47%) Frame = +2 Query: 5 YEEMLVHGVKADIVTYNALILGLCKEGKTKNAAYLVKELDKENLVPNASTFSNLIMGQCV 184 Y EM + + T+N ++ LCK GK + A +++E++ + PN +++ LI G C Sbjct: 187 YREMRRCRISPNSYTFNLVLSALCKSGKLEKAVEVLREMESVGITPNVVSYNTLIAGHCN 246 Query: 185 RQNSERAFQIYKSMKKSGCHPNSNTFKMLISTFCKNDDFDGAVQVLNEMMERCLTPESGL 364 + A ++ M K+G PN TF LI FCK A + +EM +TP + Sbjct: 247 KGLLSIATKLKNLMGKNGLEPNVVTFNSLIHGFCKEGKLHEANRFFSEMKVMNVTPNTVT 306 Query: 365 LVELCEGLRRYRKFNLATKVCTDLQR 442 L G + N+A KV ++ R Sbjct: 307 YNTLINGYGQVGNSNMAGKVYEEMMR 332 Score = 64.7 bits (156), Expect = 7e-09 Identities = 44/149 (29%), Positives = 69/149 (46%) Frame = +2 Query: 11 EMLVHGVKADIVTYNALILGLCKEGKTKNAAYLVKELDKENLVPNASTFSNLIMGQCVRQ 190 EM G+ ++V+YN LI G C +G A L + K L PN TF++LI G C Sbjct: 224 EMESVGITPNVVSYNTLIAGHCNKGLLSIATKLKNLMGKNGLEPNVVTFNSLIHGFCKEG 283 Query: 191 NSERAFQIYKSMKKSGCHPNSNTFKMLISTFCKNDDFDGAVQVLNEMMERCLTPESGLLV 370 A + + MK PN+ T+ LI+ + + + + A +V EMM + + Sbjct: 284 KLHEANRFFSEMKVMNVTPNTVTYNTLINGYGQVGNSNMAGKVYEEMMRNGVKADILTYN 343 Query: 371 ELCEGLRRYRKFNLATKVCTDLQRRRLLP 457 L GL + K A + +L + L+P Sbjct: 344 ALILGLCKEGKTKKAAFLVKELDKENLVP 372