BLASTX nr result

ID: Coptis25_contig00028364 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028364
         (218 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306375.1| predicted protein [Populus trichocarpa] gi|2...   100   1e-19
ref|XP_002530980.1| conserved hypothetical protein [Ricinus comm...    99   3e-19
ref|XP_002534631.1| hypothetical protein RCOM_0173910 [Ricinus c...    93   3e-17
ref|XP_002310063.1| predicted protein [Populus trichocarpa] gi|2...    92   4e-17

>ref|XP_002306375.1| predicted protein [Populus trichocarpa] gi|222855824|gb|EEE93371.1|
           predicted protein [Populus trichocarpa]
          Length = 773

 Score =  100 bits (249), Expect = 1e-19
 Identities = 45/66 (68%), Positives = 54/66 (81%)
 Frame = -2

Query: 217 PFQGILYRVVKSNLVLAEFGEDFHRQHSSTRRYDVSLSFNRVCLKCCHQAVASATDPLFH 38
           P+QG++YRVV+S +VL EFGEDF  QH STR YDVS SFNRVCLK  HQA+ +A+DP F 
Sbjct: 442 PYQGVIYRVVRSTIVLVEFGEDFLLQHHSTREYDVSFSFNRVCLKRAHQAIEAASDPSFK 501

Query: 37  NFLFPS 20
           NFLFP+
Sbjct: 502 NFLFPN 507


>ref|XP_002530980.1| conserved hypothetical protein [Ricinus communis]
           gi|223529456|gb|EEF31415.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 710

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 44/66 (66%), Positives = 53/66 (80%)
 Frame = -2

Query: 217 PFQGILYRVVKSNLVLAEFGEDFHRQHSSTRRYDVSLSFNRVCLKCCHQAVASATDPLFH 38
           PFQGI+YRV +S  VL EFGEDFH QH S ++YDVS SFNRVCL+  HQA+ +A+DP F 
Sbjct: 387 PFQGIIYRVQRSTTVLVEFGEDFHAQHCSFQKYDVSFSFNRVCLRRAHQAIEAASDPSFE 446

Query: 37  NFLFPS 20
           NF+FPS
Sbjct: 447 NFIFPS 452


>ref|XP_002534631.1| hypothetical protein RCOM_0173910 [Ricinus communis]
           gi|223524877|gb|EEF27754.1| hypothetical protein
           RCOM_0173910 [Ricinus communis]
          Length = 171

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 42/69 (60%), Positives = 52/69 (75%)
 Frame = -2

Query: 214 FQGILYRVVKSNLVLAEFGEDFHRQHSSTRRYDVSLSFNRVCLKCCHQAVASATDPLFHN 35
           FQGI+YRV +S  +L EFGEDFH QH  + +YDVS SFNRVCLK  HQAV +A+DP F +
Sbjct: 76  FQGIIYRVERSTTILVEFGEDFHAQHYPSMKYDVSFSFNRVCLKRAHQAVEAASDPSFES 135

Query: 34  FLFPSQKSR 8
           ++FP   SR
Sbjct: 136 YIFPCWGSR 144


>ref|XP_002310063.1| predicted protein [Populus trichocarpa] gi|222852966|gb|EEE90513.1|
           predicted protein [Populus trichocarpa]
          Length = 687

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 43/70 (61%), Positives = 53/70 (75%)
 Frame = -2

Query: 217 PFQGILYRVVKSNLVLAEFGEDFHRQHSSTRRYDVSLSFNRVCLKCCHQAVASATDPLFH 38
           P QGI+YRV +S  V+ EFG+DF  QH STR+YDVS SFNRVCLK  H A+ +A+DPLF 
Sbjct: 360 PCQGIIYRVERSTRVVVEFGKDFLLQHHSTRKYDVSFSFNRVCLKRAHHAIEAASDPLFK 419

Query: 37  NFLFPSQKSR 8
           +FLFP   S+
Sbjct: 420 SFLFPDGVSK 429


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