BLASTX nr result

ID: Coptis25_contig00028359 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028359
         (677 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001237707.1| uncharacterized protein LOC100306367 [Glycin...   157   2e-36
gb|ACU17913.1| unknown [Glycine max]                                  156   4e-36
ref|XP_002315054.1| predicted protein [Populus trichocarpa] gi|2...   153   3e-35
emb|CBI27449.3| unnamed protein product [Vitis vinifera]              148   1e-33
gb|AFK41019.1| unknown [Lotus japonicus]                              147   2e-33

>ref|NP_001237707.1| uncharacterized protein LOC100306367 [Glycine max]
           gi|255628319|gb|ACU14504.1| unknown [Glycine max]
          Length = 191

 Score =  157 bits (397), Expect = 2e-36
 Identities = 90/169 (53%), Positives = 110/169 (65%), Gaps = 1/169 (0%)
 Frame = +1

Query: 172 SVLSSKLQSWSLRVQDDAVKGRTHKALYHLYFHSSGSCLNQGSHLAVGDNYCGRTRHSRP 351
           +++S++  SW +R+QD   KG  ++A     F      LN G H      Y    R  RP
Sbjct: 2   NIMSTRQCSWPVRIQDHPDKGSINRAP----FSRGSDFLNVGYHT---QKYGHSARKCRP 54

Query: 352 VYSSTLXXXXXXXXXXXXXKHEGESSKEETGAVNNGF-RDDLERIVGTDDSTFSGVDLAT 528
           V+SS++             K + ++   E G VN+   R+ LE+IVG DDSTFSG DLAT
Sbjct: 55  VFSSSVSNSTDPSDSDNTDKKKPQNG--EMGGVNSEMLRESLEKIVGKDDSTFSGFDLAT 112

Query: 529 LIRNKYGRSYDVQLIKKEFMGKNLLALNVMWKYMEQRSFPLTEEEYILR 675
           LIRNKYGRSYDVQLIKKEFMG+NLLA+NVMWKYMEQRSFPLTEEEYILR
Sbjct: 113 LIRNKYGRSYDVQLIKKEFMGRNLLAMNVMWKYMEQRSFPLTEEEYILR 161


>gb|ACU17913.1| unknown [Glycine max]
          Length = 223

 Score =  156 bits (394), Expect = 4e-36
 Identities = 89/169 (52%), Positives = 109/169 (64%), Gaps = 1/169 (0%)
 Frame = +1

Query: 172 SVLSSKLQSWSLRVQDDAVKGRTHKALYHLYFHSSGSCLNQGSHLAVGDNYCGRTRHSRP 351
           +++S+   SW +R+QD   KG  +KA     F      LN G H      Y    R  RP
Sbjct: 2   NIMSTHQCSWPVRIQDHPDKGSINKAP----FSRGSEFLNVGYH---AQKYGHSARKCRP 54

Query: 352 VYSSTLXXXXXXXXXXXXXKHEGESSKEETGAVNNGF-RDDLERIVGTDDSTFSGVDLAT 528
           +++S++             K + ++   E G VN+   R+ LE+IVG DDSTFSG DLAT
Sbjct: 55  IFASSVSNSMDPSDSDDTDKKKPQNG--EMGGVNSEMLRESLEKIVGEDDSTFSGFDLAT 112

Query: 529 LIRNKYGRSYDVQLIKKEFMGKNLLALNVMWKYMEQRSFPLTEEEYILR 675
           LIRNKYGRSYDVQLIKKEFMG+NLLA+NVMWKYMEQRSFPLTEEEYILR
Sbjct: 113 LIRNKYGRSYDVQLIKKEFMGRNLLAMNVMWKYMEQRSFPLTEEEYILR 161


>ref|XP_002315054.1| predicted protein [Populus trichocarpa] gi|222864094|gb|EEF01225.1|
           predicted protein [Populus trichocarpa]
          Length = 233

 Score =  153 bits (386), Expect = 3e-35
 Identities = 81/125 (64%), Positives = 93/125 (74%), Gaps = 1/125 (0%)
 Frame = +1

Query: 304 LAVGDNYCGRTRHSRPVYSSTLXXXXXXXXXXXXXKHEGESSKEETGAVNNGF-RDDLER 480
           LA    Y   TR  RPV+SST+               + +SSK ETG +++   R++LER
Sbjct: 56  LASSSCYRPSTRKYRPVFSSTVDDPRDQDDPEEDGARDKDSSKGETGGIDSELLRENLER 115

Query: 481 IVGTDDSTFSGVDLATLIRNKYGRSYDVQLIKKEFMGKNLLALNVMWKYMEQRSFPLTEE 660
           IVG+DDS FSG+DLATLIRNKYGRSYDVQLIKKEFMG+NLLALNVMWKY EQRSFPLTEE
Sbjct: 116 IVGSDDSAFSGIDLATLIRNKYGRSYDVQLIKKEFMGRNLLALNVMWKYREQRSFPLTEE 175

Query: 661 EYILR 675
           EYILR
Sbjct: 176 EYILR 180


>emb|CBI27449.3| unnamed protein product [Vitis vinifera]
          Length = 265

 Score =  148 bits (373), Expect = 1e-33
 Identities = 87/174 (50%), Positives = 109/174 (62%), Gaps = 3/174 (1%)
 Frame = +1

Query: 163 EMTSVLSSKLQSWSLRVQDDAVKGRTHKALYH---LYFHSSGSCLNQGSHLAVGDNYCGR 333
           +MT +  +    W L +Q+   +GR ++ +      Y  S GS    G  LA   +   R
Sbjct: 42  DMTMLSGNHCNLW-LGIQNHPSRGRFNQIICPGSGPYIPSRGSFFYHGQCLAGSSHQSAR 100

Query: 334 TRHSRPVYSSTLXXXXXXXXXXXXXKHEGESSKEETGAVNNGFRDDLERIVGTDDSTFSG 513
               RP++SST+               +  S+ E  G  +   R++LERIVG+DDSTFSG
Sbjct: 101 --RCRPIFSSTVDDGMDPDDSEDGIDKKQPSNGELGGVNSEMIRENLERIVGSDDSTFSG 158

Query: 514 VDLATLIRNKYGRSYDVQLIKKEFMGKNLLALNVMWKYMEQRSFPLTEEEYILR 675
           +DLATLIRNKYGRSYDV LIKKEFMG+NLLALNVMWKYMEQRSFPLTEEEY+LR
Sbjct: 159 LDLATLIRNKYGRSYDVLLIKKEFMGRNLLALNVMWKYMEQRSFPLTEEEYLLR 212


>gb|AFK41019.1| unknown [Lotus japonicus]
          Length = 222

 Score =  147 bits (371), Expect = 2e-33
 Identities = 85/170 (50%), Positives = 107/170 (62%), Gaps = 2/170 (1%)
 Frame = +1

Query: 172 SVLSSKLQSWSLRVQDDAVKGRTHKALYHLYF--HSSGSCLNQGSHLAVGDNYCGRTRHS 345
           +++S+    W LRV D+  +G  HKA +  Y   +S+   L+  +   +        R  
Sbjct: 2   NIMSTHQCGWPLRVPDNPDRGNIHKAPFPGYTGTYSTSRGLDSRNVGYLAGKCHHNARKC 61

Query: 346 RPVYSSTLXXXXXXXXXXXXXKHEGESSKEETGAVNNGFRDDLERIVGTDDSTFSGVDLA 525
           RPV+SS +             K+  ++   E    +   R+ LE+IVGTDDS FSG DLA
Sbjct: 62  RPVFSSLVSDSLDPYDSDDKDKNIPQNG--EIDEHSKKLRESLEKIVGTDDSAFSGFDLA 119

Query: 526 TLIRNKYGRSYDVQLIKKEFMGKNLLALNVMWKYMEQRSFPLTEEEYILR 675
           TLIRNKYGRSYDVQLIKKEFMG+NLLALNVMWKYMEQRSFPL+EEEYILR
Sbjct: 120 TLIRNKYGRSYDVQLIKKEFMGRNLLALNVMWKYMEQRSFPLSEEEYILR 169