BLASTX nr result

ID: Coptis25_contig00028354 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028354
         (1242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271358.1| PREDICTED: aspartyl-tRNA synthetase [Vitis v...   621   e-175
ref|XP_002522090.1| aspartyl-tRNA synthetase, putative [Ricinus ...   591   e-166
ref|XP_002313196.1| predicted protein [Populus trichocarpa] gi|2...   589   e-166
ref|XP_002298795.1| predicted protein [Populus trichocarpa] gi|2...   584   e-164
ref|XP_004156904.1| PREDICTED: aspartate--tRNA ligase-like [Cucu...   582   e-164

>ref|XP_002271358.1| PREDICTED: aspartyl-tRNA synthetase [Vitis vinifera]
            gi|297736395|emb|CBI25118.3| unnamed protein product
            [Vitis vinifera]
          Length = 657

 Score =  621 bits (1601), Expect = e-175
 Identities = 307/350 (87%), Positives = 329/350 (94%)
 Frame = -1

Query: 1242 TQLDMELAFTPLEDMLKLNEDLIRYVFQEIKNIQLPNPFPRLTYAEAMNRYGSDRPDLRF 1063
            TQLDMELAFTPLEDML+LNEDLIR VF EIK IQLPNPFPRLTYAEAM+RYGSDRPDLRF
Sbjct: 305  TQLDMELAFTPLEDMLRLNEDLIRQVFLEIKGIQLPNPFPRLTYAEAMSRYGSDRPDLRF 364

Query: 1062 DLELKDVSDVFSDSTFKVFSDTLTSGGIIKALCVPLGAKRYSNSALKKGDIYGEAVKSGA 883
            DLEL++VSDVFS++TFKVF+DTL SGGIIK LCVP GAK YSN+ALKKGDIY EA+KSGA
Sbjct: 365  DLELREVSDVFSETTFKVFADTLASGGIIKVLCVPSGAKHYSNTALKKGDIYSEAIKSGA 424

Query: 882  KGLPFLKVLDDGMIEGIPALTSSLDPQKREQLLKQCSARSGDLILFTVGHHTSVNKTLDR 703
            KGLPFLKVLDDG +EGIPAL SSLDP  +++LLKQCSA SGDLILF VG H SVNKTLDR
Sbjct: 425  KGLPFLKVLDDGEVEGIPALVSSLDPTNKKRLLKQCSAGSGDLILFAVGDHASVNKTLDR 484

Query: 702  LRVFVAHELGLVDHSAHSILWVTDFPMFEWNSSEQRLEALHHPFTAPNPEDMSNLSTARA 523
            LRVF+AHELGLVDHS HSILWVTDFPMFEWNS+EQRLEALHHPFTAPNPEDM +LS+ARA
Sbjct: 485  LRVFIAHELGLVDHSRHSILWVTDFPMFEWNSAEQRLEALHHPFTAPNPEDMEDLSSARA 544

Query: 522  LAYDMVYNGVEIGGGSLRIYKREVQEKVLEIVGITPKQAEEKFGYLLEALDMGAPPHGGI 343
            LAYDMVYNGVEIGGGSLRI+KREVQEKVLEIVGI+P+QAE KFGYLLEALDMGAPPHGGI
Sbjct: 545  LAYDMVYNGVEIGGGSLRIFKREVQEKVLEIVGISPEQAEAKFGYLLEALDMGAPPHGGI 604

Query: 342  AFGLDRLVMLLAGASSIRDVIAFPKTATAQCALTRTPSEVDQQQLKDLSY 193
            A+GLDRLVMLLAGA+SIRDVIAFPKT TAQCALTRTPSEVD QQLKDLSY
Sbjct: 605  AYGLDRLVMLLAGANSIRDVIAFPKTTTAQCALTRTPSEVDPQQLKDLSY 654


>ref|XP_002522090.1| aspartyl-tRNA synthetase, putative [Ricinus communis]
            gi|223538689|gb|EEF40290.1| aspartyl-tRNA synthetase,
            putative [Ricinus communis]
          Length = 668

 Score =  591 bits (1524), Expect = e-166
 Identities = 290/351 (82%), Positives = 320/351 (91%)
 Frame = -1

Query: 1242 TQLDMELAFTPLEDMLKLNEDLIRYVFQEIKNIQLPNPFPRLTYAEAMNRYGSDRPDLRF 1063
            TQLDMELAFTPLEDMLKLNEDLIR VF EIK +QLPNPFPRLTYAEAM+RYGSDRPD RF
Sbjct: 317  TQLDMELAFTPLEDMLKLNEDLIRKVFLEIKGVQLPNPFPRLTYAEAMSRYGSDRPDTRF 376

Query: 1062 DLELKDVSDVFSDSTFKVFSDTLTSGGIIKALCVPLGAKRYSNSALKKGDIYGEAVKSGA 883
            DLEL DVSD+F +S F+VF+D+L  GGIIK LCVP GAK YSN+ALKKGDIY EA KSGA
Sbjct: 377  DLELIDVSDIFLESPFRVFADSLNKGGIIKVLCVPSGAKSYSNTALKKGDIYNEATKSGA 436

Query: 882  KGLPFLKVLDDGMIEGIPALTSSLDPQKREQLLKQCSARSGDLILFTVGHHTSVNKTLDR 703
            KGLPFLKVLDDG +EGI AL SSLDP K+E+LL++CSA  GDLILF VGH+ SVNKTLDR
Sbjct: 437  KGLPFLKVLDDGEVEGIAALVSSLDPMKKEELLRRCSAGPGDLILFAVGHYASVNKTLDR 496

Query: 702  LRVFVAHELGLVDHSAHSILWVTDFPMFEWNSSEQRLEALHHPFTAPNPEDMSNLSTARA 523
            LR+F+A+E+GL+DHS HSILWVTDFPMFEWN +EQRLEALHHPFTAPNPEDM +LS+ARA
Sbjct: 497  LRMFIANEMGLIDHSRHSILWVTDFPMFEWNDTEQRLEALHHPFTAPNPEDMEDLSSARA 556

Query: 522  LAYDMVYNGVEIGGGSLRIYKREVQEKVLEIVGITPKQAEEKFGYLLEALDMGAPPHGGI 343
            LAYDMVYNGVEIGGGSLRIYKRE+Q+KVLEIVGI+ +QAEEKFGYLLEALDMGAPPHGGI
Sbjct: 557  LAYDMVYNGVEIGGGSLRIYKREIQQKVLEIVGISAEQAEEKFGYLLEALDMGAPPHGGI 616

Query: 342  AFGLDRLVMLLAGASSIRDVIAFPKTATAQCALTRTPSEVDQQQLKDLSYS 190
            A+GLDRLVMLLA A+SIRDVIAFPKT TAQCALTR PSEV  QQLKDLS++
Sbjct: 617  AYGLDRLVMLLADANSIRDVIAFPKTTTAQCALTRAPSEVGPQQLKDLSFN 667


>ref|XP_002313196.1| predicted protein [Populus trichocarpa] gi|222849604|gb|EEE87151.1|
            predicted protein [Populus trichocarpa]
          Length = 662

 Score =  589 bits (1519), Expect = e-166
 Identities = 289/351 (82%), Positives = 321/351 (91%)
 Frame = -1

Query: 1242 TQLDMELAFTPLEDMLKLNEDLIRYVFQEIKNIQLPNPFPRLTYAEAMNRYGSDRPDLRF 1063
            TQLDMELAFT LEDML+LNEDLIR VF EIK +QLPNP PRLTYAEAM++YGSDRPD RF
Sbjct: 309  TQLDMELAFTTLEDMLRLNEDLIRKVFLEIKGVQLPNPIPRLTYAEAMSKYGSDRPDTRF 368

Query: 1062 DLELKDVSDVFSDSTFKVFSDTLTSGGIIKALCVPLGAKRYSNSALKKGDIYGEAVKSGA 883
            DL LK+VSD+F++S+F+VF+D+L SGGIIK LCVP GAK YSNSALKKGDIY EA+KSGA
Sbjct: 369  DLHLKEVSDIFAESSFRVFADSLNSGGIIKVLCVPSGAKSYSNSALKKGDIYNEAIKSGA 428

Query: 882  KGLPFLKVLDDGMIEGIPALTSSLDPQKREQLLKQCSARSGDLILFTVGHHTSVNKTLDR 703
            KGLPFLKVLDDG +EGI AL SSLD   +EQLL +CSA  GDLILF VGHH SV++TLDR
Sbjct: 429  KGLPFLKVLDDGELEGISALVSSLDSTNKEQLLSRCSAGPGDLILFAVGHHPSVHRTLDR 488

Query: 702  LRVFVAHELGLVDHSAHSILWVTDFPMFEWNSSEQRLEALHHPFTAPNPEDMSNLSTARA 523
            LR+F+A++LGLVDHS HSILWVTDFPMFEWN +EQRLEALHHPFTAPNPEDM +LS+ARA
Sbjct: 489  LRLFIANQLGLVDHSRHSILWVTDFPMFEWNETEQRLEALHHPFTAPNPEDMEDLSSARA 548

Query: 522  LAYDMVYNGVEIGGGSLRIYKREVQEKVLEIVGITPKQAEEKFGYLLEALDMGAPPHGGI 343
            LAYDMVYNGVEIGGGSLRIYKREVQ+KVLEIVGI+P+QAE KFGYLLEALDMGAPPHGGI
Sbjct: 549  LAYDMVYNGVEIGGGSLRIYKREVQQKVLEIVGISPEQAEAKFGYLLEALDMGAPPHGGI 608

Query: 342  AFGLDRLVMLLAGASSIRDVIAFPKTATAQCALTRTPSEVDQQQLKDLSYS 190
            A+GLDRL MLLAGA+SIRDVIAFPKT TAQCALTRTPSEVD QQL+DLS+S
Sbjct: 609  AYGLDRLAMLLAGATSIRDVIAFPKTTTAQCALTRTPSEVDPQQLRDLSFS 659


>ref|XP_002298795.1| predicted protein [Populus trichocarpa] gi|222846053|gb|EEE83600.1|
            predicted protein [Populus trichocarpa]
          Length = 667

 Score =  584 bits (1505), Expect = e-164
 Identities = 288/350 (82%), Positives = 318/350 (90%)
 Frame = -1

Query: 1242 TQLDMELAFTPLEDMLKLNEDLIRYVFQEIKNIQLPNPFPRLTYAEAMNRYGSDRPDLRF 1063
            TQLDMELAFTP+EDML+LNEDLIR VF EIK +QLPNPFPRLTYAEAM+RYGSDRPD RF
Sbjct: 315  TQLDMELAFTPMEDMLRLNEDLIRKVFLEIKGVQLPNPFPRLTYAEAMSRYGSDRPDTRF 374

Query: 1062 DLELKDVSDVFSDSTFKVFSDTLTSGGIIKALCVPLGAKRYSNSALKKGDIYGEAVKSGA 883
            DL LKDVSD+FS+S+F+VF+D+L SGGIIK LCVP GAK YSN+ALKKGDIY EA+KSGA
Sbjct: 375  DLHLKDVSDIFSESSFRVFADSLKSGGIIKVLCVPSGAKSYSNTALKKGDIYNEAIKSGA 434

Query: 882  KGLPFLKVLDDGMIEGIPALTSSLDPQKREQLLKQCSARSGDLILFTVGHHTSVNKTLDR 703
            KGL FLKVLD+G  EGI AL SSLD   +EQLL +CSA  GDLILF VGHH+SVNKTLDR
Sbjct: 435  KGLAFLKVLDNGEFEGISALLSSLDSTNKEQLLSRCSAGPGDLILFAVGHHSSVNKTLDR 494

Query: 702  LRVFVAHELGLVDHSAHSILWVTDFPMFEWNSSEQRLEALHHPFTAPNPEDMSNLSTARA 523
            LR+F+A++LGL D S +SILWVTDFPMFEWN +EQRLEALHHPFTAPNPEDM +LS+ARA
Sbjct: 495  LRLFIANQLGLNDPSRYSILWVTDFPMFEWNETEQRLEALHHPFTAPNPEDMKDLSSARA 554

Query: 522  LAYDMVYNGVEIGGGSLRIYKREVQEKVLEIVGITPKQAEEKFGYLLEALDMGAPPHGGI 343
            LAYDMVYNGVEIGGGSLRIYKRE+Q+KVLEIVGITP+QAE KFGYLLEALDMGAPPHGGI
Sbjct: 555  LAYDMVYNGVEIGGGSLRIYKREIQQKVLEIVGITPEQAEAKFGYLLEALDMGAPPHGGI 614

Query: 342  AFGLDRLVMLLAGASSIRDVIAFPKTATAQCALTRTPSEVDQQQLKDLSY 193
            A+GLDRL MLLAGA+SIRDVIAFPKT TAQCALTR PSEVD QQLKDLS+
Sbjct: 615  AYGLDRLAMLLAGANSIRDVIAFPKTTTAQCALTRAPSEVDPQQLKDLSF 664


>ref|XP_004156904.1| PREDICTED: aspartate--tRNA ligase-like [Cucumis sativus]
          Length = 670

 Score =  582 bits (1501), Expect = e-164
 Identities = 289/352 (82%), Positives = 315/352 (89%)
 Frame = -1

Query: 1242 TQLDMELAFTPLEDMLKLNEDLIRYVFQEIKNIQLPNPFPRLTYAEAMNRYGSDRPDLRF 1063
            TQLDMEL+FT LEDML+LNEDLIR VF E+K +QLPNPFPRLTYAEAM+RYGSDRPD RF
Sbjct: 318  TQLDMELSFTTLEDMLRLNEDLIRKVFWEVKGVQLPNPFPRLTYAEAMSRYGSDRPDTRF 377

Query: 1062 DLELKDVSDVFSDSTFKVFSDTLTSGGIIKALCVPLGAKRYSNSALKKGDIYGEAVKSGA 883
            DL+L DVSD+F+DS FKVF+D L+SGGIIK LCVP GAKRYSN+ALKKGDIY EA KSGA
Sbjct: 378  DLQLNDVSDIFADSPFKVFADALSSGGIIKVLCVPSGAKRYSNTALKKGDIYTEATKSGA 437

Query: 882  KGLPFLKVLDDGMIEGIPALTSSLDPQKREQLLKQCSARSGDLILFTVGHHTSVNKTLDR 703
            KGLPFLKV DDG IEGIPAL S LDP  RE+ L +CSA  GDLILF VGH  SVNKTLDR
Sbjct: 438  KGLPFLKVTDDGGIEGIPALVSCLDPTDREEFLNRCSAGPGDLILFAVGHRVSVNKTLDR 497

Query: 702  LRVFVAHELGLVDHSAHSILWVTDFPMFEWNSSEQRLEALHHPFTAPNPEDMSNLSTARA 523
            LR++VA+ELGLVDHS HSILWVTDFPMFEWN  +QRLEALHHPFTAPNPED+ +L +ARA
Sbjct: 498  LRLYVANELGLVDHSRHSILWVTDFPMFEWNDLDQRLEALHHPFTAPNPEDVGDLPSARA 557

Query: 522  LAYDMVYNGVEIGGGSLRIYKREVQEKVLEIVGITPKQAEEKFGYLLEALDMGAPPHGGI 343
            LAYDMVYNGVEIGGGSLRI+KREVQEKVLEIVGI+ +QAE KFGYLLEALDMGAPPHGGI
Sbjct: 558  LAYDMVYNGVEIGGGSLRIHKREVQEKVLEIVGISLEQAEAKFGYLLEALDMGAPPHGGI 617

Query: 342  AFGLDRLVMLLAGASSIRDVIAFPKTATAQCALTRTPSEVDQQQLKDLSYSN 187
            A+GLDRLVMLLA A+SIRDVIAFPKT TAQCALTR PSEVD QQLKDLSY +
Sbjct: 618  AYGLDRLVMLLADANSIRDVIAFPKTTTAQCALTRAPSEVDPQQLKDLSYQS 669


Top