BLASTX nr result
ID: Coptis25_contig00028346
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00028346 (1437 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo... 322 1e-85 gb|ABA98491.1| retrotransposon protein, putative, unclassified [... 321 3e-85 gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ... 320 4e-85 gb|AAP53315.2| retrotransposon protein, putative, unclassified [... 320 4e-85 ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [S... 305 1e-80 >gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group] Length = 1594 Score = 322 bits (826), Expect = 1e-85 Identities = 171/494 (34%), Positives = 271/494 (54%), Gaps = 15/494 (3%) Frame = +1 Query: 1 VEWCFLHQIFEKLGFSRKWIDMIKVCLETVSFRVLLNGSPLSHLFPQRGLRQGDPLSPYL 180 VEW FLH + KLGF W+++I C+ TV++R+ +NG P+RGLRQGDPLSPYL Sbjct: 813 VEWSFLHDMMLKLGFHTDWVNLIMKCVSTVTYRIRVNGELSESFSPERGLRQGDPLSPYL 872 Query: 181 FILVTEALSRILKQAEDENRISGIKVRRGSPPISHLLYADDLIMFCKANLDEINSVKDIL 360 F+L E S +L + E+E R+ GI++ +G+P +SHLL+ADD ++ C+AN E ++ IL Sbjct: 873 FLLCAEGFSALLSKTEEEGRLHGIRICQGAPSVSHLLFADDSLILCRANGGEAQQLQTIL 932 Query: 361 QKYCNASGQEVSWEKSSAFFSRNVHNTHQKMILRRWKVRRFTEKEKYLGVPIILGKKKGE 540 Q Y SGQ ++ +KS+ FS N + + ++ ++R T EKYLG+P+ +G+ + + Sbjct: 933 QIYEECSGQVINKDKSAVMFSPNTSSLEKGAVMAALNMQRETTNEKYLGLPVFVGRSRTK 992 Query: 541 DFEYLLESLQRKVSGWKAKILSQASRTTLVKSVGQAVPIYAMGVYALPNRINERIDRLNR 720 F YL E + +++ GWK K+LS+A + L+K+V QA+P +AMG + L + ++I ++ Sbjct: 993 IFSYLKERIWQRIQGWKEKLLSRAGKEILIKAVAQAIPTFAMGCFELTKDLCDQISKMIA 1052 Query: 721 DFWWNGTTNTTAWHTMSWEKLCKSKANGGLGFRKAKEMNLAMLAKHSWRLITDENSIWSR 900 +WW+ H +SW KL K GGLGFR NLAMLAK WRLI D +S+ SR Sbjct: 1053 KYWWSNQEKDNKMHWLSWNKLTLPKNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSR 1112 Query: 901 TFNSIY--KWDCFNNQDGKKKKPQSFFWRGVQLSMKAVKEGFMWLLGNGSRIKTFSEPWL 1074 + Y DCF K+ S+ WR +Q ++ ++ G +W +G+GS+I +++PW+ Sbjct: 1113 VLRAKYFPLGDCFR---PKQTSNVSYTWRSIQKGLRVLQNGMIWRMGDGSKINIWADPWI 1169 Query: 1075 L--FLEKPLILGNHLNPERVNLNLTRRVSDLSRENEEEWDITRLGDLFPNLISDCIKTLT 1248 + KP + P NL +V +L WD L F IK++ Sbjct: 1170 PRGWSRKP------MTPR--GANLVTKVEELIDPYTGTWDEDLLSQTFWEEDVAAIKSIP 1221 Query: 1249 IKPNVXXXXXXXXXXXGVLTVRSAYKLLAKEYEEGESSRMNKKSI-----------RRIW 1395 + + G TV+SAYK+ + E +SR + +++W Sbjct: 1222 VHVEMEDVLAWHFDARGCFTVKSAYKV--QREMERRASRNGCPGVSNWESGDDDFWKKLW 1279 Query: 1396 KIKTDAATQLFIWK 1437 K+ + F+W+ Sbjct: 1280 KLGVPGKIKHFLWR 1293 >gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 1621 Score = 321 bits (822), Expect = 3e-85 Identities = 170/494 (34%), Positives = 271/494 (54%), Gaps = 15/494 (3%) Frame = +1 Query: 1 VEWCFLHQIFEKLGFSRKWIDMIKVCLETVSFRVLLNGSPLSHLFPQRGLRQGDPLSPYL 180 VEW FLH + KLGF W+++I C+ TV++R+ +NG P RGLRQGDPLSPYL Sbjct: 840 VEWSFLHDMILKLGFHTDWVNLIMKCVSTVTYRIRVNGELSESFSPGRGLRQGDPLSPYL 899 Query: 181 FILVTEALSRILKQAEDENRISGIKVRRGSPPISHLLYADDLIMFCKANLDEINSVKDIL 360 F+L E S +L + E+E R+ GI++ +G+P +SHLL+ADD ++ C+AN E ++ IL Sbjct: 900 FLLCAEGFSALLSKTEEEGRLHGIRICQGAPSVSHLLFADDSLILCRANGGEAQQLQTIL 959 Query: 361 QKYCNASGQEVSWEKSSAFFSRNVHNTHQKMILRRWKVRRFTEKEKYLGVPIILGKKKGE 540 Q Y SGQ ++ +KS+ FS N + ++ ++ ++R T E+YLG+P+ +G+ + + Sbjct: 960 QIYEECSGQVINKDKSAVMFSPNTSSLEKRAVMAALNMQRETTNERYLGLPVFVGRSRTK 1019 Query: 541 DFEYLLESLQRKVSGWKAKILSQASRTTLVKSVGQAVPIYAMGVYALPNRINERIDRLNR 720 F YL E + +++ GWK K+LS+A + L+K+V QA+P +AMG + L + ++I ++ Sbjct: 1020 IFSYLKERIWQRIQGWKEKLLSRAGKEILIKAVAQAIPTFAMGCFELTKDLCDQISKMIA 1079 Query: 721 DFWWNGTTNTTAWHTMSWEKLCKSKANGGLGFRKAKEMNLAMLAKHSWRLITDENSIWSR 900 +WW+ H +SW KL K GGLGFR NLAMLAK WRLI D +S+ SR Sbjct: 1080 KYWWSNQEKDNKMHWLSWNKLTLPKNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSR 1139 Query: 901 TFNSIY--KWDCFNNQDGKKKKPQSFFWRGVQLSMKAVKEGFMWLLGNGSRIKTFSEPWL 1074 + Y DCF K+ S+ WR +Q ++ ++ G +W +G+GS+I +++PW+ Sbjct: 1140 VLRAKYFPLGDCFR---PKQTSNVSYTWRSIQKGLRVLQNGMIWRVGDGSKINIWADPWI 1196 Query: 1075 L--FLEKPLILGNHLNPERVNLNLTRRVSDLSRENEEEWDITRLGDLFPNLISDCIKTLT 1248 + KP + P NL +V +L WD L F IK++ Sbjct: 1197 PRGWSRKP------MTPR--GANLVTKVEELIDPYTGTWDEDLLSQTFWEEDVAAIKSIP 1248 Query: 1249 IKPNVXXXXXXXXXXXGVLTVRSAYKLLAKEYEEGESSRMNKKSI-----------RRIW 1395 + + G TV+SAYK+ + E +SR + +++W Sbjct: 1249 VHVEMEDVLAWHFDARGCFTVKSAYKV--QREMERRASRNGCPGVSNWESGDDDFWKKLW 1306 Query: 1396 KIKTDAATQLFIWK 1437 K+ + F+W+ Sbjct: 1307 KLGVPGKIKHFLWR 1320 >gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group] Length = 1509 Score = 320 bits (821), Expect = 4e-85 Identities = 170/494 (34%), Positives = 270/494 (54%), Gaps = 15/494 (3%) Frame = +1 Query: 1 VEWCFLHQIFEKLGFSRKWIDMIKVCLETVSFRVLLNGSPLSHLFPQRGLRQGDPLSPYL 180 VEW FLH + KLGF W+++I C+ TV++R+ +NG P+RGLRQGDPLSPYL Sbjct: 785 VEWSFLHDMMLKLGFHTDWVNLIMKCVSTVTYRIRVNGELSESFSPERGLRQGDPLSPYL 844 Query: 181 FILVTEALSRILKQAEDENRISGIKVRRGSPPISHLLYADDLIMFCKANLDEINSVKDIL 360 F+L E S +L + E+E R+ GI++ +G+P +SHLL+ADD ++ C+AN E ++ IL Sbjct: 845 FLLCAEGFSALLSKTEEEGRLHGIRICQGAPSVSHLLFADDSLILCRANGGEAQQLQTIL 904 Query: 361 QKYCNASGQEVSWEKSSAFFSRNVHNTHQKMILRRWKVRRFTEKEKYLGVPIILGKKKGE 540 Q Y SGQ ++ +KS+ FS N + + ++ ++R T EKYLG+P+ +G+ + + Sbjct: 905 QIYEECSGQVINKDKSAVMFSPNTSSLEKGAVMAALNMQRETTNEKYLGLPVFVGRSRTK 964 Query: 541 DFEYLLESLQRKVSGWKAKILSQASRTTLVKSVGQAVPIYAMGVYALPNRINERIDRLNR 720 F YL E + +++ GWK K+LS+A + L+K+V Q +P +AMG + L + ++I ++ Sbjct: 965 IFSYLKERIWQRIQGWKEKLLSRAGKEILIKAVAQVIPTFAMGCFELTKDLCDQISKMIA 1024 Query: 721 DFWWNGTTNTTAWHTMSWEKLCKSKANGGLGFRKAKEMNLAMLAKHSWRLITDENSIWSR 900 +WW+ H +SW KL K GGLGFR NLAMLAK WRLI D +S+ SR Sbjct: 1025 KYWWSNQEKDNKMHWLSWNKLTLPKNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSR 1084 Query: 901 TFNSIY--KWDCFNNQDGKKKKPQSFFWRGVQLSMKAVKEGFMWLLGNGSRIKTFSEPWL 1074 + Y DCF K+ S+ WR +Q ++ ++ G +W +G+GS+I +++PW+ Sbjct: 1085 VLRAKYFPLGDCFR---PKQTSNVSYTWRSIQKGLRVLQNGMIWRVGDGSKINIWADPWI 1141 Query: 1075 L--FLEKPLILGNHLNPERVNLNLTRRVSDLSRENEEEWDITRLGDLFPNLISDCIKTLT 1248 + KP + P NL +V +L WD L F IK++ Sbjct: 1142 PRGWSRKP------MTPR--GANLVTKVEELIDPYTGTWDEDLLSQTFWEEDVAAIKSIP 1193 Query: 1249 IKPNVXXXXXXXXXXXGVLTVRSAYKLLAKEYEEGESSRMNKKSI-----------RRIW 1395 + + G TV+SAYK+ + E +SR + +++W Sbjct: 1194 VHVEMEDVLAWHFDARGCFTVKSAYKV--QREMERRASRNGCPGVSNWESGDDDFWKKLW 1251 Query: 1396 KIKTDAATQLFIWK 1437 K+ + F+W+ Sbjct: 1252 KLGVPGKIKHFLWR 1265 >gb|AAP53315.2| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 1505 Score = 320 bits (821), Expect = 4e-85 Identities = 170/494 (34%), Positives = 270/494 (54%), Gaps = 15/494 (3%) Frame = +1 Query: 1 VEWCFLHQIFEKLGFSRKWIDMIKVCLETVSFRVLLNGSPLSHLFPQRGLRQGDPLSPYL 180 VEW FLH + KLGF W+++I C+ TV++R+ +NG P+RGLRQGDPLSPYL Sbjct: 781 VEWSFLHDMMLKLGFHTDWVNLIMKCVSTVTYRIRVNGELSESFSPERGLRQGDPLSPYL 840 Query: 181 FILVTEALSRILKQAEDENRISGIKVRRGSPPISHLLYADDLIMFCKANLDEINSVKDIL 360 F+L E S +L + E+E R+ GI++ +G+P +SHLL+ADD ++ C+AN E ++ IL Sbjct: 841 FLLCAEGFSALLSKTEEEGRLHGIRICQGAPSVSHLLFADDSLILCRANGGEAQQLQTIL 900 Query: 361 QKYCNASGQEVSWEKSSAFFSRNVHNTHQKMILRRWKVRRFTEKEKYLGVPIILGKKKGE 540 Q Y SGQ ++ +KS+ FS N + + ++ ++R T EKYLG+P+ +G+ + + Sbjct: 901 QIYEECSGQVINKDKSAVMFSPNTSSLEKGAVMAALNMQRETTNEKYLGLPVFVGRSRTK 960 Query: 541 DFEYLLESLQRKVSGWKAKILSQASRTTLVKSVGQAVPIYAMGVYALPNRINERIDRLNR 720 F YL E + +++ GWK K+LS+A + L+K+V Q +P +AMG + L + ++I ++ Sbjct: 961 IFSYLKERIWQRIQGWKEKLLSRAGKEILIKAVAQVIPTFAMGCFELTKDLCDQISKMIA 1020 Query: 721 DFWWNGTTNTTAWHTMSWEKLCKSKANGGLGFRKAKEMNLAMLAKHSWRLITDENSIWSR 900 +WW+ H +SW KL K GGLGFR NLAMLAK WRLI D +S+ SR Sbjct: 1021 KYWWSNQEKDNKMHWLSWNKLTLPKNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSR 1080 Query: 901 TFNSIY--KWDCFNNQDGKKKKPQSFFWRGVQLSMKAVKEGFMWLLGNGSRIKTFSEPWL 1074 + Y DCF K+ S+ WR +Q ++ ++ G +W +G+GS+I +++PW+ Sbjct: 1081 VLRAKYFPLGDCFR---PKQTSNVSYTWRSIQKGLRVLQNGMIWRVGDGSKINIWADPWI 1137 Query: 1075 L--FLEKPLILGNHLNPERVNLNLTRRVSDLSRENEEEWDITRLGDLFPNLISDCIKTLT 1248 + KP + P NL +V +L WD L F IK++ Sbjct: 1138 PRGWSRKP------MTPR--GANLVTKVEELIDPYTGTWDEDLLSQTFWEEDVAAIKSIP 1189 Query: 1249 IKPNVXXXXXXXXXXXGVLTVRSAYKLLAKEYEEGESSRMNKKSI-----------RRIW 1395 + + G TV+SAYK+ + E +SR + +++W Sbjct: 1190 VHVEMEDVLAWHFDARGCFTVKSAYKV--QREMERRASRNGCPGVSNWESGDDDFWKKLW 1247 Query: 1396 KIKTDAATQLFIWK 1437 K+ + F+W+ Sbjct: 1248 KLGVPGKIKHFLWR 1261 >ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [Sorghum bicolor] gi|241926916|gb|EES00061.1| hypothetical protein SORBIDRAFT_03g001780 [Sorghum bicolor] Length = 631 Score = 305 bits (782), Expect = 1e-80 Identities = 159/466 (34%), Positives = 260/466 (55%), Gaps = 5/466 (1%) Frame = +1 Query: 1 VEWCFLHQIFEKLGFSRKWIDMIKVCLETVSFRVLLNGSPLSHLFPQRGLRQGDPLSPYL 180 VEW FL + K+GF KW+ +I C+ TV++++ +N S +FPQRGLRQGDPLSPYL Sbjct: 165 VEWSFLENMMRKMGFDEKWVQLIMKCVTTVTYKIKVNDSYTQKIFPQRGLRQGDPLSPYL 224 Query: 181 FILVTEALSRILKQAEDENRISGIKVRRGSPPISHLLYADDLIMFCKANLDEINSVKDIL 360 FI+ E LS +L++AE + +I GIK+ RG+P ++HL +ADD ++ +A + ++ IL Sbjct: 225 FIICAEGLSAMLQKAEQKGKIEGIKICRGAPKVNHLFFADDSLILMRARASDALELRRIL 284 Query: 361 QKYCNASGQEVSWEKSSAFFSRNVHNTHQKMILRRWKVRRFTEKEKYLGVPIILGKKKGE 540 Y ASGQ ++ EKSS FS N + ++ + EKYLG+P+ +GK + + Sbjct: 285 DVYEKASGQVINKEKSSMMFSPNTGQHDRSLMRSNLSITDEASTEKYLGLPVNIGKSRKK 344 Query: 541 DFEYLLESLQRKVSGWKAKILSQASRTTLVKSVGQAVPIYAMGVYALPNRINERIDRLNR 720 FEY+ + + ++ GW+ K+LS+A + L+K+V Q++P YAM + L + + + + Sbjct: 345 PFEYIKKKIWSRIQGWQEKLLSKAGKEILIKAVAQSIPTYAMSCFDLTKGLCDELSSIIG 404 Query: 721 DFWWNGTTNTTAWHTMSWEKLCKSKANGGLGFRKAKEMNLAMLAKHSWRLITDENSIWSR 900 +WW+ H +SWEKL +SK GGLGFR NLAML++ +WRL+T+ +S+ + Sbjct: 405 RYWWSQQDKANKIHWISWEKLTQSKEKGGLGFRDLHLFNLAMLSRQAWRLLTNPDSLCGQ 464 Query: 901 TFNSIYKWDCFNNQDGKKKKPQ---SFFWRGVQLSMKAVKEGFMWLLGNGSRIKTFSEPW 1071 + Y F + D P+ S+ WR + + +KEG +W +GNG +K + PW Sbjct: 465 VLKARY----FPHSDILHCSPRPRISYTWRSILKGVALLKEGIIWRIGNGKNVKIWEHPW 520 Query: 1072 LLFLEKPLILGNHLNPERVNLNLTRRVSDLSRENEEEWDITRLGDLFPNLISDCIKTLTI 1251 + I + P +L RV++L EWD + DLF ++ I + I Sbjct: 521 I----PKGITRKPITPR--GASLLTRVNELINPVTGEWDEQLVNDLFWPQDAEEILQIPI 574 Query: 1252 KPNVXXXXXXXXXXXGVLTVRSAYKLLA--KEYEEGESSRMNKKSI 1383 ++ G+ +V+SAYKL ++ + G+ + +K + Sbjct: 575 DEHMEDWLAWHFDATGLFSVKSAYKLAVSIRDADRGDDASSSKNEV 620