BLASTX nr result
ID: Coptis25_contig00028338
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00028338 (453 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pen... 105 4e-21 ref|XP_004136748.1| PREDICTED: putative pentatricopeptide repeat... 105 4e-21 gb|ABR17838.1| unknown [Picea sitchensis] 101 5e-20 ref|XP_003617808.1| Pentatricopeptide repeat-containing protein ... 100 1e-19 ref|XP_002512645.1| pentatricopeptide repeat-containing protein,... 100 2e-19 >ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At5g52630-like [Cucumis sativus] Length = 598 Score = 105 bits (262), Expect = 4e-21 Identities = 59/151 (39%), Positives = 94/151 (62%), Gaps = 1/151 (0%) Frame = -1 Query: 450 MKSHARFLKLGLDSNPIVATRLLNAYLNSQVQNSLTYAYQLFEQVPHRNKDTTLWTSIIS 271 ++ HA LK GL + P+V+ L+N Y +Q+ ++ Q+F++ P K +T W+S+IS Sbjct: 45 LQLHAHILKFGLQTIPLVSHNLINLYSKTQLP---LFSLQVFDETP--KKSSTTWSSVIS 99 Query: 270 AFNKSGNSYNAIQLFSQMLHQ-TKPNHFIYATVVRACATSVAYLQLGKTIHSLVIKTGYS 94 AF ++ A+Q F +ML+ +P+ IY + +AC + +GK++H L +KTGY Sbjct: 100 AFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGF-LRRSDVGKSVHCLAVKTGYY 158 Query: 93 PNVVVETSLLDMYAKWGLVEFSRILFDEMPE 1 +V V +SL+DMYAK G + +R LFDEMPE Sbjct: 159 CDVFVGSSLVDMYAKCGEIGDARHLFDEMPE 189 Score = 73.9 bits (180), Expect = 1e-11 Identities = 42/147 (28%), Positives = 80/147 (54%), Gaps = 1/147 (0%) Frame = -1 Query: 441 HARFLKLGLDSNPIVATRLLNAYLNSQVQNSLTYAYQLFEQVPHRNKDTTLWTSIISAFN 262 H +K G + V + L++ Y + A LF+++P RN W+ +I + Sbjct: 149 HCLAVKTGYYCDVFVGSSLVDMYAKC---GEIGDARHLFDEMPERN--VVSWSGMIYGYA 203 Query: 261 KSGNSYNAIQLFSQ-MLHQTKPNHFIYATVVRACATSVAYLQLGKTIHSLVIKTGYSPNV 85 + + A+ LF Q ++ N F +++V+R C++S +L+LGK IH L +K + + Sbjct: 204 QLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSST-FLELGKLIHGLCLKMSFDSSS 262 Query: 84 VVETSLLDMYAKWGLVEFSRILFDEMP 4 V ++L+ +Y+K G++E + +FDE+P Sbjct: 263 FVGSALISLYSKCGVIEGAYQVFDEIP 289 Score = 57.8 bits (138), Expect = 9e-07 Identities = 40/147 (27%), Positives = 73/147 (49%), Gaps = 1/147 (0%) Frame = -1 Query: 441 HARFLKLGLDSNPIVATRLLNAYLNSQVQNSLTYAYQLFEQVPHRNKDTTLWTSIISAFN 262 H LK+ DS+ V + L++ Y V + AYQ+F+++P RN LW S++ A Sbjct: 250 HGLCLKMSFDSSSFVGSALISLYSKCGV---IEGAYQVFDEIPTRN--LGLWNSMLIACA 304 Query: 261 KSGNSYNAIQLFSQMLH-QTKPNHFIYATVVRACATSVAYLQLGKTIHSLVIKTGYSPNV 85 + ++ LF +M + KPN + +V+ AC + ++ G+ SL+ G P Sbjct: 305 QHAHTQRVFGLFEEMGNVGMKPNFIXFLSVLYAC-SHAGLVEKGREYFSLMRDYGIEPET 363 Query: 84 VVETSLLDMYAKWGLVEFSRILFDEMP 4 SL+D+ + G ++ + + +MP Sbjct: 364 EHYASLVDLLGRAGKLQEAVSVIKQMP 390 >ref|XP_004136748.1| PREDICTED: putative pentatricopeptide repeat-containing protein At5g52630-like [Cucumis sativus] Length = 598 Score = 105 bits (262), Expect = 4e-21 Identities = 59/151 (39%), Positives = 94/151 (62%), Gaps = 1/151 (0%) Frame = -1 Query: 450 MKSHARFLKLGLDSNPIVATRLLNAYLNSQVQNSLTYAYQLFEQVPHRNKDTTLWTSIIS 271 ++ HA LK GL + P+V+ L+N Y +Q+ ++ Q+F++ P K +T W+S+IS Sbjct: 45 LQLHAHILKFGLQTIPLVSHNLINLYSKTQLP---LFSLQVFDETP--KKSSTTWSSVIS 99 Query: 270 AFNKSGNSYNAIQLFSQMLHQ-TKPNHFIYATVVRACATSVAYLQLGKTIHSLVIKTGYS 94 AF ++ A+Q F +ML+ +P+ IY + +AC + +GK++H L +KTGY Sbjct: 100 AFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGF-LRRSDVGKSVHCLAVKTGYY 158 Query: 93 PNVVVETSLLDMYAKWGLVEFSRILFDEMPE 1 +V V +SL+DMYAK G + +R LFDEMPE Sbjct: 159 CDVFVGSSLVDMYAKCGEIGDARHLFDEMPE 189 Score = 73.9 bits (180), Expect = 1e-11 Identities = 42/147 (28%), Positives = 80/147 (54%), Gaps = 1/147 (0%) Frame = -1 Query: 441 HARFLKLGLDSNPIVATRLLNAYLNSQVQNSLTYAYQLFEQVPHRNKDTTLWTSIISAFN 262 H +K G + V + L++ Y + A LF+++P RN W+ +I + Sbjct: 149 HCLAVKTGYYCDVFVGSSLVDMYAKC---GEIGDARHLFDEMPERN--VVSWSGMIYGYA 203 Query: 261 KSGNSYNAIQLFSQ-MLHQTKPNHFIYATVVRACATSVAYLQLGKTIHSLVIKTGYSPNV 85 + + A+ LF Q ++ N F +++V+R C++S +L+LGK IH L +K + + Sbjct: 204 QLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSST-FLELGKLIHGLCLKMSFDSSS 262 Query: 84 VVETSLLDMYAKWGLVEFSRILFDEMP 4 V ++L+ +Y+K G++E + +FDE+P Sbjct: 263 FVGSALISLYSKCGVIEGAYQVFDEIP 289 Score = 57.4 bits (137), Expect = 1e-06 Identities = 40/147 (27%), Positives = 73/147 (49%), Gaps = 1/147 (0%) Frame = -1 Query: 441 HARFLKLGLDSNPIVATRLLNAYLNSQVQNSLTYAYQLFEQVPHRNKDTTLWTSIISAFN 262 H LK+ DS+ V + L++ Y V + AYQ+F+++P RN LW S++ A Sbjct: 250 HGLCLKMSFDSSSFVGSALISLYSKCGV---IEGAYQVFDEIPTRN--LGLWNSMLIACA 304 Query: 261 KSGNSYNAIQLFSQMLH-QTKPNHFIYATVVRACATSVAYLQLGKTIHSLVIKTGYSPNV 85 + ++ LF +M + KPN + +V+ AC + ++ G+ SL+ G P Sbjct: 305 QHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYAC-SHAGLVEKGREYFSLMRDYGIEPET 363 Query: 84 VVETSLLDMYAKWGLVEFSRILFDEMP 4 SL+D+ + G ++ + + +MP Sbjct: 364 EHYASLVDLLGRAGKLQEAVSVIKQMP 390 >gb|ABR17838.1| unknown [Picea sitchensis] Length = 795 Score = 101 bits (252), Expect = 5e-20 Identities = 59/148 (39%), Positives = 89/148 (60%), Gaps = 1/148 (0%) Frame = -1 Query: 441 HARFLKLGLDSNPIVATRLLNAYLNSQVQNSLTYAYQLFEQVPHRNKDTTLWTSIISAFN 262 H ++ G +SN +V L+N Y NS AY+LFE++P +N W +IIS ++ Sbjct: 345 HGYAIRSGFESNDVVGNALVNMYAKCGNVNS---AYKLFERMPKKN--VVAWNAIISGYS 399 Query: 261 KSGNSYNAIQLFSQMLHQ-TKPNHFIYATVVRACATSVAYLQLGKTIHSLVIKTGYSPNV 85 + G+ + A+ LF +M Q KP+ F +V+ ACA +A L+ GK IH I++G+ NV Sbjct: 400 QHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLA-LEQGKQIHGYTIRSGFESNV 458 Query: 84 VVETSLLDMYAKWGLVEFSRILFDEMPE 1 VV T L+D+YAK G V ++ LF+ MPE Sbjct: 459 VVGTGLVDIYAKCGNVNTAQKLFERMPE 486 Score = 87.4 bits (215), Expect = 1e-15 Identities = 54/149 (36%), Positives = 84/149 (56%), Gaps = 1/149 (0%) Frame = -1 Query: 447 KSHARFLKLGLDSNPIVATRLLNAYLNSQVQNSLTYAYQLFEQVPHRNKDTTLWTSIISA 268 K H + G +S+ IV T L + Y SL A Q+F+++P R D W +II+ Sbjct: 141 KVHEDIIARGFESDVIVGTALASMYTKC---GSLENARQVFDRMPKR--DVVSWNAIIAG 195 Query: 267 FNKSGNSYNAIQLFSQM-LHQTKPNHFIYATVVRACATSVAYLQLGKTIHSLVIKTGYSP 91 ++++G Y A+ LFS+M ++ KPN +V+ CA +A L+ GK IH I++G Sbjct: 196 YSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLA-LEQGKQIHCYAIRSGIES 254 Query: 90 NVVVETSLLDMYAKWGLVEFSRILFDEMP 4 +V+V L++MYAK G V + LF+ MP Sbjct: 255 DVLVVNGLVNMYAKCGNVNTAHKLFERMP 283 Score = 80.1 bits (196), Expect = 2e-13 Identities = 49/148 (33%), Positives = 83/148 (56%), Gaps = 1/148 (0%) Frame = -1 Query: 441 HARFLKLGLDSNPIVATRLLNAYLNSQVQNSLTYAYQLFEQVPHRNKDTTLWTSIISAFN 262 H ++ G++S+ +V L+N Y N+ A++LFE++P R D W +II ++ Sbjct: 244 HCYAIRSGIESDVLVVNGLVNMYAKCGNVNT---AHKLFERMPIR--DVASWNAIIGGYS 298 Query: 261 KSGNSYNAIQLFSQM-LHQTKPNHFIYATVVRACATSVAYLQLGKTIHSLVIKTGYSPNV 85 + + A+ F++M + KPN +V+ ACA A L+ G+ IH I++G+ N Sbjct: 299 LNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFA-LEQGQQIHGYAIRSGFESND 357 Query: 84 VVETSLLDMYAKWGLVEFSRILFDEMPE 1 VV +L++MYAK G V + LF+ MP+ Sbjct: 358 VVGNALVNMYAKCGNVNSAYKLFERMPK 385 Score = 65.1 bits (157), Expect = 6e-09 Identities = 45/140 (32%), Positives = 73/140 (52%), Gaps = 1/140 (0%) Frame = -1 Query: 417 LDSNPIVATRLLNAYLNSQVQNSLTYAYQLFEQVPHRNKDTTLWTSIISAFNKSGNSYNA 238 L N + TR ++A N Q Q F Q RN + +W I + K+G A Sbjct: 56 LRRNKVKTTREVSACAN-QTQ---------FTQTDIRN-NAVVWKETIIGYVKNGFWNKA 104 Query: 237 IQLFSQMLHQ-TKPNHFIYATVVRACATSVAYLQLGKTIHSLVIKTGYSPNVVVETSLLD 61 ++L+ QM P+ ++ +V++AC S + LQ G+ +H +I G+ +V+V T+L Sbjct: 105 LRLYYQMQRTGINPDKLVFLSVIKACG-SQSDLQAGRKVHEDIIARGFESDVIVGTALAS 163 Query: 60 MYAKWGLVEFSRILFDEMPE 1 MY K G +E +R +FD MP+ Sbjct: 164 MYTKCGSLENARQVFDRMPK 183 >ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] Length = 811 Score = 100 bits (249), Expect = 1e-19 Identities = 60/147 (40%), Positives = 92/147 (62%), Gaps = 2/147 (1%) Frame = -1 Query: 441 HARFLKLGLDSNPIVATRLLNAYLN-SQVQNSLTYAYQLFEQVPHRNKDTTLWTSIISAF 265 H+ LK GL+SN V+ +++ Y +++NS+ +LFE++P RN T W +II + Sbjct: 361 HSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSM----KLFEELPDRNDVT--WNTIIVGY 414 Query: 264 NKSGNSYNAIQLFSQML-HQTKPNHFIYATVVRACATSVAYLQLGKTIHSLVIKTGYSPN 88 + G+ A+ LF+ ML H +P Y++V+RA A S+A L+ G IHSL IKT Y+ + Sbjct: 415 VQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASA-SLAALEPGLQIHSLTIKTMYNKD 473 Query: 87 VVVETSLLDMYAKWGLVEFSRILFDEM 7 VV SL+DMYAK G + +R+ FD+M Sbjct: 474 TVVANSLIDMYAKCGRINDARLTFDKM 500 Score = 90.5 bits (223), Expect = 1e-16 Identities = 59/149 (39%), Positives = 88/149 (59%), Gaps = 2/149 (1%) Frame = -1 Query: 441 HARFLKLGLDSNPIVATRLLNAYLNSQVQNSLTYAYQLFEQVPHRNKDTTLWTSIISAFN 262 H LK D + V LL Y S + A +LFE++P D W+ +I+ + Sbjct: 260 HGCALKGCYDHDLFVGIALLELYAKS---GEIIDAQRLFEEMP--KTDLIPWSLMIARYA 314 Query: 261 KSGNSYNAIQLFSQMLHQTK--PNHFIYATVVRACATSVAYLQLGKTIHSLVIKTGYSPN 88 +S S A+ LF +M QT PN+F +A+V++ACA+SV+ L LGK IHS V+K G + N Sbjct: 315 QSDRSKEALDLFLRM-RQTSVVPNNFTFASVLQACASSVS-LDLGKQIHSCVLKFGLNSN 372 Query: 87 VVVETSLLDMYAKWGLVEFSRILFDEMPE 1 V V +++D+YAK G +E S LF+E+P+ Sbjct: 373 VFVSNAIMDVYAKCGEIENSMKLFEELPD 401 Score = 72.4 bits (176), Expect = 4e-11 Identities = 45/148 (30%), Positives = 85/148 (57%), Gaps = 1/148 (0%) Frame = -1 Query: 441 HARFLKLGLDSNPIVATRLLNAYLNSQVQNSLTYAYQLFEQVPHRNKDTTLWTSIISAFN 262 HA KLG ++ V T L++AY V+ ++ A +F+ + KD WT +++ + Sbjct: 159 HACVYKLGHHADAFVGTALIDAY---SVRGNVDVARHVFDDICC--KDMVSWTGMVACYA 213 Query: 261 KSGNSYNAIQLFSQM-LHQTKPNHFIYATVVRACATSVAYLQLGKTIHSLVIKTGYSPNV 85 ++ ++QLF+QM + KPN+F + +++C A+ +GK++H +K Y ++ Sbjct: 214 ENCFYEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAF-NVGKSVHGCALKGCYDHDL 272 Query: 84 VVETSLLDMYAKWGLVEFSRILFDEMPE 1 V +LL++YAK G + ++ LF+EMP+ Sbjct: 273 FVGIALLELYAKSGEIIDAQRLFEEMPK 300 Score = 57.4 bits (137), Expect = 1e-06 Identities = 39/146 (26%), Positives = 75/146 (51%), Gaps = 1/146 (0%) Frame = -1 Query: 441 HARFLKLGLDSNPIVATRLLNAYLNSQVQNSLTYAYQLFEQVPHRNKDTTLWTSIISAFN 262 H LK G + LLN Y+ S NSL A +LF+++P N T + ++ ++ Sbjct: 58 HCHILKRGTSLDLFAQNILLNFYVQS---NSLQDASKLFDEMPQTN--TISFVTLAQGYS 112 Query: 261 KSGNSYNAIQLFSQMLHQT-KPNHFIYATVVRACATSVAYLQLGKTIHSLVIKTGYSPNV 85 + + A+ ++ + + N F++ T+++ S+ L T+H+ V K G+ + Sbjct: 113 RDHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLV-SMDLAHLCWTLHACVYKLGHHADA 171 Query: 84 VVETSLLDMYAKWGLVEFSRILFDEM 7 V T+L+D Y+ G V+ +R +FD++ Sbjct: 172 FVGTALIDAYSVRGNVDVARHVFDDI 197 >ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 716 Score = 100 bits (248), Expect = 2e-19 Identities = 58/149 (38%), Positives = 95/149 (63%), Gaps = 2/149 (1%) Frame = -1 Query: 441 HARFLKLGLDSNPIVATRLLNAYLN-SQVQNSLTYAYQLFEQVPHRNKDTTLWTSIISAF 265 H LK+GLD N V+ L++ Y ++ NS+ +LF ++P+RN+ T W ++I + Sbjct: 266 HCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSM----KLFMELPNRNEVT--WNTMIVGY 319 Query: 264 NKSGNSYNAIQLFSQMLH-QTKPNHFIYATVVRACATSVAYLQLGKTIHSLVIKTGYSPN 88 +SG+ A+ L+ ML Q + + Y++V+RACA S+A ++LG IHSL +KT Y + Sbjct: 320 VQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACA-SLAAMELGTQIHSLSLKTIYDKD 378 Query: 87 VVVETSLLDMYAKWGLVEFSRILFDEMPE 1 VVV +L+DMYAK G ++ +R++FD + E Sbjct: 379 VVVGNALIDMYAKCGSIKNARLVFDMLSE 407 Score = 87.0 bits (214), Expect = 1e-15 Identities = 52/148 (35%), Positives = 85/148 (57%), Gaps = 1/148 (0%) Frame = -1 Query: 441 HARFLKLGLDSNPIVATRLLNAYLNSQVQNSLTYAYQLFEQVPHRNKDTTLWTSIISAFN 262 HA KLG +SN V T L++AY V S+ A Q F+ + KD WT +++ + Sbjct: 64 HACIYKLGHESNAFVGTALIDAYA---VCGSVNSARQAFDAIAC--KDMVSWTGMVACYA 118 Query: 261 KSGNSYNAIQLFSQM-LHQTKPNHFIYATVVRACATSVAYLQLGKTIHSLVIKTGYSPNV 85 ++ +++QLF++M + PNHF +A V++AC A+ +GK++H V+KT Y ++ Sbjct: 119 ENDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAF-SVGKSVHGCVLKTCYEMDL 177 Query: 84 VVETSLLDMYAKWGLVEFSRILFDEMPE 1 V LLD+Y K+G +F+EMP+ Sbjct: 178 YVGVGLLDLYTKFGDANDVLRVFEEMPK 205 Score = 82.8 bits (203), Expect = 3e-14 Identities = 53/147 (36%), Positives = 81/147 (55%), Gaps = 1/147 (0%) Frame = -1 Query: 441 HARFLKLGLDSNPIVATRLLNAYLNSQVQNSLTYAYQLFEQVPHRNKDTTLWTSIISAFN 262 H LK + + V LL+ Y N + ++FE++P D W+ +IS + Sbjct: 165 HGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVL---RVFEEMPKH--DVIPWSFMISRYA 219 Query: 261 KSGNSYNAIQLFSQMLHQ-TKPNHFIYATVVRACATSVAYLQLGKTIHSLVIKTGYSPNV 85 +S S A++LF QM PN F +A+V+++CA S+ LQLGK +H V+K G NV Sbjct: 220 QSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCA-SIENLQLGKQVHCHVLKVGLDGNV 278 Query: 84 VVETSLLDMYAKWGLVEFSRILFDEMP 4 V +L+D+YAK G ++ S LF E+P Sbjct: 279 FVSNALMDVYAKCGRLDNSMKLFMELP 305