BLASTX nr result

ID: Coptis25_contig00028337 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028337
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523063.1| multidrug resistance-associated protein 2, 6...   132   3e-29
emb|CBI36841.3| unnamed protein product [Vitis vinifera]              132   4e-29
ref|XP_002265012.1| PREDICTED: ABC transporter C family member 4...   132   4e-29
ref|XP_002321011.1| multidrug resistance protein ABC transporter...   129   3e-28
ref|XP_002880324.1| ATMRP4 [Arabidopsis lyrata subsp. lyrata] gi...   127   1e-27

>ref|XP_002523063.1| multidrug resistance-associated protein 2, 6 (mrp2, 6),
           abc-transoprter, putative [Ricinus communis]
           gi|223537625|gb|EEF39248.1| multidrug
           resistance-associated protein 2, 6 (mrp2, 6),
           abc-transoprter, putative [Ricinus communis]
          Length = 1506

 Score =  132 bits (332), Expect = 3e-29
 Identities = 57/86 (66%), Positives = 72/86 (83%)
 Frame = -1

Query: 259 KGYKSPLRIDEIPSLAPNHGAEFISQVFESNWPKPSESSKHPVRTTLLRCFWKDFVSTAF 80
           KGYKSPL+IDE+P+L+P H AE +SQ+F + WPKP E SKHPVRTTLLRCFWK+   TAF
Sbjct: 272 KGYKSPLKIDEVPTLSPEHRAERMSQLFAAKWPKPHEKSKHPVRTTLLRCFWKEIAFTAF 331

Query: 79  LAVIRLCFMYIGPVLLQQFVAFSSDK 2
           LA++RLC MY+GP+L+Q FV ++S K
Sbjct: 332 LAIMRLCVMYVGPLLIQSFVDYTSGK 357


>emb|CBI36841.3| unnamed protein product [Vitis vinifera]
          Length = 1079

 Score =  132 bits (331), Expect = 4e-29
 Identities = 57/86 (66%), Positives = 72/86 (83%)
 Frame = -1

Query: 259 KGYKSPLRIDEIPSLAPNHGAEFISQVFESNWPKPSESSKHPVRTTLLRCFWKDFVSTAF 80
           KGYKSPL+IDEIPSL+P H AE +S++FESNWPKP E   HPVRTTL RCFW++   TAF
Sbjct: 40  KGYKSPLKIDEIPSLSPEHRAERMSELFESNWPKPHEKLNHPVRTTLFRCFWREVAFTAF 99

Query: 79  LAVIRLCFMYIGPVLLQQFVAFSSDK 2
           LA++RLC +Y+GP+L+Q+FV F+S K
Sbjct: 100 LAIVRLCVIYVGPLLIQRFVDFTSGK 125


>ref|XP_002265012.1| PREDICTED: ABC transporter C family member 4-like [Vitis vinifera]
          Length = 1509

 Score =  132 bits (331), Expect = 4e-29
 Identities = 57/86 (66%), Positives = 72/86 (83%)
 Frame = -1

Query: 259 KGYKSPLRIDEIPSLAPNHGAEFISQVFESNWPKPSESSKHPVRTTLLRCFWKDFVSTAF 80
           KGYKSPL+IDEIPSL+P H AE +S++FESNWPKP E   HPVRTTL RCFW++   TAF
Sbjct: 274 KGYKSPLKIDEIPSLSPEHRAERMSELFESNWPKPHEKLNHPVRTTLFRCFWREVAFTAF 333

Query: 79  LAVIRLCFMYIGPVLLQQFVAFSSDK 2
           LA++RLC +Y+GP+L+Q+FV F+S K
Sbjct: 334 LAIVRLCVIYVGPLLIQRFVDFTSGK 359


>ref|XP_002321011.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222861784|gb|EEE99326.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1507

 Score =  129 bits (323), Expect = 3e-28
 Identities = 56/86 (65%), Positives = 72/86 (83%)
 Frame = -1

Query: 259 KGYKSPLRIDEIPSLAPNHGAEFISQVFESNWPKPSESSKHPVRTTLLRCFWKDFVSTAF 80
           KGYKSPL+ID++P+L+P H AE +SQ+FES+WPKP E S HPVRTTLLRCFWK+   TAF
Sbjct: 273 KGYKSPLKIDDVPTLSPEHRAEKMSQLFESSWPKPHEKSNHPVRTTLLRCFWKEISFTAF 332

Query: 79  LAVIRLCFMYIGPVLLQQFVAFSSDK 2
           LA++RL  MY+GP+L+Q FV ++S K
Sbjct: 333 LAILRLSVMYVGPMLIQSFVDYTSGK 358


>ref|XP_002880324.1| ATMRP4 [Arabidopsis lyrata subsp. lyrata]
           gi|297326163|gb|EFH56583.1| ATMRP4 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1525

 Score =  127 bits (319), Expect = 1e-27
 Identities = 55/86 (63%), Positives = 73/86 (84%)
 Frame = -1

Query: 259 KGYKSPLRIDEIPSLAPNHGAEFISQVFESNWPKPSESSKHPVRTTLLRCFWKDFVSTAF 80
           KGYKSPL ++E+P+L+P H AE ++++FES+WPKPSE+S HPVRTTLLRCFWK+ + TA 
Sbjct: 278 KGYKSPLTLEEVPTLSPEHKAERLARLFESSWPKPSENSSHPVRTTLLRCFWKEILYTAI 337

Query: 79  LAVIRLCFMYIGPVLLQQFVAFSSDK 2
           LA++RL  MY+GPVL+Q FV F+S K
Sbjct: 338 LAIVRLGVMYVGPVLIQSFVDFTSGK 363


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