BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028327
         (238 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004148341.1| PREDICTED: pentatricopeptide repeat-containi...   133   2e-29
ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containi...   129   2e-28
emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera]   129   2e-28
ref|XP_003533718.1| PREDICTED: pentatricopeptide repeat-containi...   126   2e-27
ref|XP_002533731.1| pentatricopeptide repeat-containing protein,...   125   3e-27

>ref|XP_004148341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g18940-like [Cucumis sativus]
           gi|449507064|ref|XP_004162923.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g18940-like [Cucumis sativus]
          Length = 844

 Score =  133 bits (334), Expect = 2e-29
 Identities = 60/79 (75%), Positives = 72/79 (91%)
 Frame = +1

Query: 1   ILDMKSKGFKPNETSLSLMLHCYAKGGNIRGIEVIEEEIYSGEIFPSWMLLRTLVLANSK 180
           +LDM++KGFKPNETS SLMLHCYAKGGN+RG+E I ++IY G+IFPSW+LLRTL+LAN K
Sbjct: 571 LLDMRNKGFKPNETSFSLMLHCYAKGGNVRGLERIGKDIYDGQIFPSWVLLRTLILANFK 630

Query: 181 CRALRGMERAFKELGKKGY 237
           CRA+RGMERAF+EL K GY
Sbjct: 631 CRAVRGMERAFEELMKNGY 649


>ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940
           [Vitis vinifera] gi|297735424|emb|CBI17864.3| unnamed
           protein product [Vitis vinifera]
          Length = 821

 Score =  129 bits (324), Expect = 2e-28
 Identities = 65/79 (82%), Positives = 69/79 (87%)
 Frame = +1

Query: 1   ILDMKSKGFKPNETSLSLMLHCYAKGGNIRGIEVIEEEIYSGEIFPSWMLLRTLVLANSK 180
           ILDMKSKGFKPNETS SLML+CYAKGGN RGIE IEEEIY+G IFPSW+LLRTLVLAN K
Sbjct: 548 ILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLANFK 607

Query: 181 CRALRGMERAFKELGKKGY 237
            RAL GMERAF+E  K GY
Sbjct: 608 RRALMGMERAFQEFCKHGY 626


>emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera]
          Length = 821

 Score =  129 bits (324), Expect = 2e-28
 Identities = 65/79 (82%), Positives = 69/79 (87%)
 Frame = +1

Query: 1   ILDMKSKGFKPNETSLSLMLHCYAKGGNIRGIEVIEEEIYSGEIFPSWMLLRTLVLANSK 180
           ILDMKSKGFKPNETS SLML+CYAKGGN RGIE IEEEIY+G IFPSW+LLRTLVLAN K
Sbjct: 548 ILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLANFK 607

Query: 181 CRALRGMERAFKELGKKGY 237
            RAL GMERAF+E  K GY
Sbjct: 608 RRALMGMERAFQEFCKHGY 626


>ref|XP_003533718.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g18940-like [Glycine max]
          Length = 830

 Score =  126 bits (317), Expect = 2e-27
 Identities = 57/79 (72%), Positives = 69/79 (87%)
 Frame = +1

Query: 1   ILDMKSKGFKPNETSLSLMLHCYAKGGNIRGIEVIEEEIYSGEIFPSWMLLRTLVLANSK 180
           I DM++KGFKPNETS SL+LHCY+K GN+RGIE +E+EIY G++FPSW+LLRTLVL+N K
Sbjct: 555 IQDMQTKGFKPNETSYSLLLHCYSKAGNVRGIEKVEKEIYDGQVFPSWILLRTLVLSNHK 614

Query: 181 CRALRGMERAFKELGKKGY 237
           CR LRGMERAF +L K GY
Sbjct: 615 CRHLRGMERAFDQLQKYGY 633


>ref|XP_002533731.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526356|gb|EEF28650.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 835

 Score =  125 bits (315), Expect = 3e-27
 Identities = 58/79 (73%), Positives = 70/79 (88%)
 Frame = +1

Query: 1   ILDMKSKGFKPNETSLSLMLHCYAKGGNIRGIEVIEEEIYSGEIFPSWMLLRTLVLANSK 180
           ILDM++KGF+P+ETS SLM+H YAKGGN++GIE+IE+ IY G+IFPSWMLLRTLVLAN K
Sbjct: 561 ILDMRNKGFRPSETSYSLMVHSYAKGGNVKGIEMIEKSIYDGDIFPSWMLLRTLVLANFK 620

Query: 181 CRALRGMERAFKELGKKGY 237
           CR+L GMERAF+ L K GY
Sbjct: 621 CRSLTGMERAFQALQKHGY 639