BLASTX nr result

ID: Coptis25_contig00028320 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028320
         (1286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277705.1| PREDICTED: uncharacterized protein LOC100254...   374   e-101
ref|XP_002519663.1| conserved hypothetical protein [Ricinus comm...   358   2e-96
ref|XP_003542938.1| PREDICTED: uncharacterized protein LOC100791...   350   6e-94
ref|NP_564348.1| uncharacterized protein [Arabidopsis thaliana] ...   347   5e-93
ref|XP_002316711.1| predicted protein [Populus trichocarpa] gi|2...   346   6e-93

>ref|XP_002277705.1| PREDICTED: uncharacterized protein LOC100254825 [Vitis vinifera]
            gi|147866339|emb|CAN79921.1| hypothetical protein
            VITISV_002110 [Vitis vinifera]
            gi|297740736|emb|CBI30918.3| unnamed protein product
            [Vitis vinifera]
          Length = 318

 Score =  374 bits (959), Expect = e-101
 Identities = 182/323 (56%), Positives = 227/323 (70%), Gaps = 6/323 (1%)
 Frame = +2

Query: 62   MEIFFXXXXXXXXXXXXXXXXXXXPFQYIYHLIFQSKQ-----EEGQNPVLVFYQGSVYH 226
            ME+F+                   PF+ +   +  S+        G++PV + Y+G+V+H
Sbjct: 1    MELFYLLCSILSAFFTSLVLSCLLPFRALLRCLCSSRSVGSSAATGEDPVSL-YEGTVWH 59

Query: 227  ERKRPVRHAFRYDVRYALLDLDGGPNTLPSSFFENHLSAQQARQITITTGPVFLLTIPPS 406
            ER+RPV H+FRY VRYAL+D+D  PN LP     +HLS  +AR+I  TTGPVFLLTIPPS
Sbjct: 60   ERRRPVHHSFRYAVRYALVDIDSAPNVLP-----DHLSGDEARRIAGTTGPVFLLTIPPS 114

Query: 407  VGYEQNPLSVYYCYDIEGSAPRLKKCIAEVTNTPWGERVSFVFNPDSDLVAKPLHVSPFM 586
            VGYEQNPLS+YYCYD+  S   LK+CIAEVTNTPWGERV+FVFNP+ DLVAKPLHVSPFM
Sbjct: 115  VGYEQNPLSLYYCYDLAASTQNLKQCIAEVTNTPWGERVTFVFNPNFDLVAKPLHVSPFM 174

Query: 587  DMLGNWSMRANEPGDNLFLAISVEHPKLGDFFTATLTARKVSSG-APSPSIFFWMMPQKV 763
            DM GNWS++AN PGDNL +AI+V+HPKLG++FTATLTA+KVSS       +FFW+MP KV
Sbjct: 175  DMYGNWSIKANVPGDNLLVAITVQHPKLGNYFTATLTAKKVSSSLVVDRELFFWLMPHKV 234

Query: 764  ALGIYWQALKLWWNNVQFMQHPRYFCPKYREEARLRNRILQCCQTPEENENSRLKVDRSH 943
            A+ IYW ALKLWW NVQF+ HP+   P YREEA +R+R L+CCQ     E+  + V  S 
Sbjct: 235  AIWIYWHALKLWWKNVQFIHHPKCSNPAYREEASVRDRKLKCCQASGLGEDEHMLVGGSG 294

Query: 944  SNGLADGDMVGRWCVWRDAQWPW 1012
             + +AD     RW  WRDA+WPW
Sbjct: 295  PDFVADNYEEDRWFSWRDAKWPW 317


>ref|XP_002519663.1| conserved hypothetical protein [Ricinus communis]
            gi|223541080|gb|EEF42636.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 314

 Score =  358 bits (918), Expect = 2e-96
 Identities = 174/286 (60%), Positives = 210/286 (73%), Gaps = 10/286 (3%)
 Frame = +2

Query: 185  QNPVLVFYQGSVYHERKRPVRHAFRYDVRYALLDLDGGPNTLPSSFFENHLSAQQARQIT 364
            Q+  +  Y+G+V+HER+ PVRH+F+Y VRYAL DLD  P+T        HLSA  AR+I 
Sbjct: 42   QSDSISLYEGTVWHERRHPVRHSFQYSVRYALFDLDRSPSTPVG-----HLSAHDARRIA 96

Query: 365  ITTGPVFLLTIPPSVGYEQNPLSVYYCYDIEGSAPRLKKCIAEVTNTPWGERVSFVFNPD 544
             + GPV+LLTIPPSVGYEQNPLS+YYCY++EGS   L KCIAEVTNTPWGERV+FVFNP 
Sbjct: 97   DSNGPVYLLTIPPSVGYEQNPLSLYYCYEVEGSINHLTKCIAEVTNTPWGERVTFVFNPS 156

Query: 545  SDLVAKPLHVSPFMDMLGNWSMRANEPGDNLFLAISVEHPKLGDFFTATLTARKVSS-GA 721
            SDLVAKPLHVSPFMDMLGNW ++AN PGD+L + ISV+HP+ GD+F ATL A+++ S  A
Sbjct: 157  SDLVAKPLHVSPFMDMLGNWRIKANAPGDSLSVIISVQHPEFGDYFVATLEAKRLPSLLA 216

Query: 722  PSPSIFFWMMPQKVALGIYWQALKLWWNNVQFMQHPRYFCPKYREEARLRNRILQCCQTP 901
               S FFW+MPQKVAL IYW ALKLWW NVQF+QHPRY  P+YREEA LR++ LQCC+ P
Sbjct: 217  SDHSFFFWLMPQKVALWIYWHALKLWWKNVQFIQHPRYGNPRYREEAVLRDQKLQCCRAP 276

Query: 902  EENENSRLK---------VDRSHSNGLADGDMVGRWCVWRDAQWPW 1012
              NE+  L+         VDRSH           R   W+DA+WPW
Sbjct: 277  TRNEDKHLEDRGFCPGSSVDRSHGE---------RQFKWKDAKWPW 313


>ref|XP_003542938.1| PREDICTED: uncharacterized protein LOC100791856 [Glycine max]
          Length = 318

 Score =  350 bits (897), Expect = 6e-94
 Identities = 161/271 (59%), Positives = 206/271 (76%), Gaps = 1/271 (0%)
 Frame = +2

Query: 206  YQGSVYHERKRPVRHAFRYDVRYALLDLDGGPNTLPSSFFENHLSAQQARQITITTGPVF 385
            Y+G+V+H+R+ PV H+F+Y VRYAL+DLD  P+        +HLS  +ARQIT T GP+ 
Sbjct: 53   YEGTVWHQRRHPVNHSFQYQVRYALIDLDRAPHAP-----HDHLSLDEARQITDTNGPIL 107

Query: 386  LLTIPPSVGYEQNPLSVYYCYDIEGSAPRLKKCIAEVTNTPWGERVSFVFNPDSDLVAKP 565
            LLTIPPSVGYEQNPLSVYYCY +EGS  RLKKCIAEVTNTPWGERVSFVFNP SDLVAK 
Sbjct: 108  LLTIPPSVGYEQNPLSVYYCYAVEGSTKRLKKCIAEVTNTPWGERVSFVFNPHSDLVAKA 167

Query: 566  LHVSPFMDMLGNWSMRANEPGDNLFLAISVEHPKLGDFFTATLTARKVSSGAPSP-SIFF 742
            LHVSPFMDMLG+W+++AN+PG+NL ++ISV HP+ G++FTA+L A+K+ S   S  ++FF
Sbjct: 168  LHVSPFMDMLGSWNIKANDPGENLTISISVHHPEHGNYFTASLKAKKLCSSPESDHAVFF 227

Query: 743  WMMPQKVALGIYWQALKLWWNNVQFMQHPRYFCPKYREEARLRNRILQCCQTPEENENSR 922
            W+MP KVA+ IYW A+KLWW NV+F+QHPRY  P Y++EA +R++ LQCC   ++N    
Sbjct: 228  WLMPHKVAVWIYWHAIKLWWKNVRFVQHPRYSIPTYKDEALMRDKKLQCCGLSDDNRQHL 287

Query: 923  LKVDRSHSNGLADGDMVGRWCVWRDAQWPWN 1015
             +        LA+     RW  WRDA+WPW+
Sbjct: 288  QQRGSDPGCCLAELSPQNRWFRWRDAKWPWS 318


>ref|NP_564348.1| uncharacterized protein [Arabidopsis thaliana]
            gi|42571697|ref|NP_973939.1| uncharacterized protein
            [Arabidopsis thaliana]
            gi|12321635|gb|AAG50861.1|AC074176_10 unknown protein
            [Arabidopsis thaliana] gi|222423586|dbj|BAH19762.1|
            AT1G30130 [Arabidopsis thaliana]
            gi|332193061|gb|AEE31182.1| uncharacterized protein
            [Arabidopsis thaliana] gi|332193062|gb|AEE31183.1|
            uncharacterized protein [Arabidopsis thaliana]
          Length = 311

 Score =  347 bits (889), Expect = 5e-93
 Identities = 164/295 (55%), Positives = 215/295 (72%), Gaps = 1/295 (0%)
 Frame = +2

Query: 134  PFQYIYHLIFQSKQEEGQNPVLVFYQGSVYHERKRPVRHAFRYDVRYALLDLDGGPNTLP 313
            PF+++ H +  S+     +P + FY+G+V+H+R RPVRH+FRY VRYAL DLD   NT P
Sbjct: 25   PFRFLLHRLLPSRA--AVDPNVSFYEGTVWHDRLRPVRHSFRYSVRYALFDLDKAINTPP 82

Query: 314  SSFFENHLSAQQARQITITTGPVFLLTIPPSVGYEQNPLSVYYCYDIEGSAPRLKKCIAE 493
                 +H SA +AR+++ TTGP+FLLTIPPSVGYEQNPLS+YYCYD+EGS+ RL KCIA+
Sbjct: 83   -----DHFSADEARRVSRTTGPIFLLTIPPSVGYEQNPLSLYYCYDLEGSSKRLSKCIAQ 137

Query: 494  VTNTPWGERVSFVFNPDSDLVAKPLHVSPFMDMLGNWSMRANEPGDNLFLAISVEHPKLG 673
            VTNTPWGERV+FVF+P+SDLVAK L VSPFMDMLGNW +RANEPGD+L ++I+ +HP  G
Sbjct: 138  VTNTPWGERVTFVFDPESDLVAKSLQVSPFMDMLGNWKIRANEPGDDLSVSIASQHPHFG 197

Query: 674  DFFTATLTARKVS-SGAPSPSIFFWMMPQKVALGIYWQALKLWWNNVQFMQHPRYFCPKY 850
            ++F+ATL A+++  S    P++FFW+MP KVA+ IYW AL+LWW +V F+QHPRY  P Y
Sbjct: 198  NYFSATLKAKRIPLSRVSDPAVFFWLMPHKVAIWIYWHALQLWWKSVPFIQHPRYSNPSY 257

Query: 851  REEARLRNRILQCCQTPEENENSRLKVDRSHSNGLADGDMVGRWCVWRDAQWPWN 1015
            REEA  R++ L+C      + +   K D    +G       G    WRDA WPW+
Sbjct: 258  REEAAKRDQELRCPGLDGSDSDKTNKFDGLKGDG-CSSSFGGCRFAWRDANWPWS 311


>ref|XP_002316711.1| predicted protein [Populus trichocarpa] gi|222859776|gb|EEE97323.1|
            predicted protein [Populus trichocarpa]
          Length = 305

 Score =  346 bits (888), Expect = 6e-93
 Identities = 167/269 (62%), Positives = 204/269 (75%)
 Frame = +2

Query: 206  YQGSVYHERKRPVRHAFRYDVRYALLDLDGGPNTLPSSFFENHLSAQQARQITITTGPVF 385
            YQG+V+HER+RPV H+F Y VRYAL DLD            +HLSA +ARQ+  TTGPVF
Sbjct: 46   YQGTVWHERRRPVHHSFLYSVRYALFDLDHAHAP------PDHLSADEARQVAQTTGPVF 99

Query: 386  LLTIPPSVGYEQNPLSVYYCYDIEGSAPRLKKCIAEVTNTPWGERVSFVFNPDSDLVAKP 565
            LLTIPPSVGYEQNPLS+YYCYD++GSA  LKKCIAEVTNTPWGERV F+F P+SD+VAKP
Sbjct: 100  LLTIPPSVGYEQNPLSLYYCYDMDGSARLLKKCIAEVTNTPWGERVVFIFYPNSDVVAKP 159

Query: 566  LHVSPFMDMLGNWSMRANEPGDNLFLAISVEHPKLGDFFTATLTARKVSSGAPSPSIFFW 745
            LHVSPFMDMLGNW+++AN+P D+L + ISV+HP+LGD+F A+L A+++SS     ++FFW
Sbjct: 160  LHVSPFMDMLGNWNIKANDPTDSLSVFISVQHPELGDYFVASLKAKRLSS-VSDHAMFFW 218

Query: 746  MMPQKVALGIYWQALKLWWNNVQFMQHPRYFCPKYREEARLRNRILQCCQTPEENENSRL 925
            +MP KVAL IYW ALKLWW NV F+QHPRY  P YREEA +R++ LQC Q    +  + L
Sbjct: 219  LMPHKVALWIYWHALKLWWKNVHFIQHPRYTNPTYREEAMIRDKKLQCNQALAWDRGNCL 278

Query: 926  KVDRSHSNGLADGDMVGRWCVWRDAQWPW 1012
            + D  H   LAD     RW  WRDA+ PW
Sbjct: 279  QADGHHPGNLADRK---RWFKWRDAKRPW 304


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