BLASTX nr result

ID: Coptis25_contig00028318 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028318
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318301.1| predicted protein [Populus trichocarpa] gi|2...   105   4e-21
gb|ABK94145.1| unknown [Populus trichocarpa]                          105   4e-21
emb|CBI39004.3| unnamed protein product [Vitis vinifera]              100   2e-19
ref|XP_002276337.1| PREDICTED: patatin group A-3 [Vitis vinifera]     100   2e-19
ref|XP_002322380.1| predicted protein [Populus trichocarpa] gi|2...    99   4e-19

>ref|XP_002318301.1| predicted protein [Populus trichocarpa] gi|222858974|gb|EEE96521.1|
           predicted protein [Populus trichocarpa]
          Length = 438

 Score =  105 bits (262), Expect = 4e-21
 Identities = 61/104 (58%), Positives = 70/104 (67%), Gaps = 8/104 (7%)
 Frame = -3

Query: 290 NSVEDLLVVSLGNGVASPACGAMTLSPVNLVRIGGEGASDMVDEAVSMAFGDLRTSNYVR 111
           N VEDLLVVSLGNG +         +P   VRI GEGASDMVD+AVSMAFG+ RTSNYVR
Sbjct: 276 NGVEDLLVVSLGNGESDFGYQNQNSTPARFVRIAGEGASDMVDQAVSMAFGNCRTSNYVR 335

Query: 110 IQSNG--------PNASACSRKNSNLSAIAEAMLAQKNVESVLF 3
           IQ+NG         + S  S K ++L A+   MLAQKNVESVLF
Sbjct: 336 IQANGIIAKKHGIADKSMKSNKKADLLAMTAEMLAQKNVESVLF 379


>gb|ABK94145.1| unknown [Populus trichocarpa]
          Length = 222

 Score =  105 bits (262), Expect = 4e-21
 Identities = 61/104 (58%), Positives = 70/104 (67%), Gaps = 8/104 (7%)
 Frame = -3

Query: 290 NSVEDLLVVSLGNGVASPACGAMTLSPVNLVRIGGEGASDMVDEAVSMAFGDLRTSNYVR 111
           N VEDLLVVSLGNG +         +P   VRI GEGASDMVD+AVSMAFG+ RTSNYVR
Sbjct: 60  NGVEDLLVVSLGNGESDFGYQNQNSTPARFVRIAGEGASDMVDQAVSMAFGNCRTSNYVR 119

Query: 110 IQSNG--------PNASACSRKNSNLSAIAEAMLAQKNVESVLF 3
           IQ+NG         + S  S K ++L A+   MLAQKNVESVLF
Sbjct: 120 IQANGIIAKKHGIADKSMKSNKKADLLAMTAEMLAQKNVESVLF 163


>emb|CBI39004.3| unnamed protein product [Vitis vinifera]
          Length = 417

 Score =  100 bits (248), Expect = 2e-19
 Identities = 57/99 (57%), Positives = 67/99 (67%), Gaps = 3/99 (3%)
 Frame = -3

Query: 290 NSVEDLLVVSLGNGVASPACGAMTLSPVNLVRIGGEGASDMVDEAVSMAFGDLRTSNYVR 111
           NSV DLLVVSLGNG +    G ++ +   LVRI GEGASDMVD+AVSMAFG+ R +NYVR
Sbjct: 260 NSVGDLLVVSLGNGESDSGAGNLSSTASELVRIAGEGASDMVDQAVSMAFGESRATNYVR 319

Query: 110 IQSN---GPNASACSRKNSNLSAIAEAMLAQKNVESVLF 3
           IQ N   G   S   + +  L  + E ML QKNVESVLF
Sbjct: 320 IQGNAMLGKRHSNGLKDSKQLVGMTEEMLEQKNVESVLF 358


>ref|XP_002276337.1| PREDICTED: patatin group A-3 [Vitis vinifera]
          Length = 427

 Score =  100 bits (248), Expect = 2e-19
 Identities = 57/99 (57%), Positives = 67/99 (67%), Gaps = 3/99 (3%)
 Frame = -3

Query: 290 NSVEDLLVVSLGNGVASPACGAMTLSPVNLVRIGGEGASDMVDEAVSMAFGDLRTSNYVR 111
           NSV DLLVVSLGNG +    G ++ +   LVRI GEGASDMVD+AVSMAFG+ R +NYVR
Sbjct: 270 NSVGDLLVVSLGNGESDSGAGNLSSTASELVRIAGEGASDMVDQAVSMAFGESRATNYVR 329

Query: 110 IQSN---GPNASACSRKNSNLSAIAEAMLAQKNVESVLF 3
           IQ N   G   S   + +  L  + E ML QKNVESVLF
Sbjct: 330 IQGNAMLGKRHSNGLKDSKQLVGMTEEMLEQKNVESVLF 368


>ref|XP_002322380.1| predicted protein [Populus trichocarpa] gi|222869376|gb|EEF06507.1|
           predicted protein [Populus trichocarpa]
          Length = 438

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 59/104 (56%), Positives = 68/104 (65%), Gaps = 8/104 (7%)
 Frame = -3

Query: 290 NSVEDLLVVSLGNGVASPACGAMTLSPVNLVRIGGEGASDMVDEAVSMAFGDLRTSNYVR 111
           N VE+LLVVSLGNG +       + +P   VRI GEGASD VD+AVSMAFG  R SNYVR
Sbjct: 276 NGVENLLVVSLGNGESDFGVQNQSSTPARFVRIAGEGASDTVDQAVSMAFGPCRASNYVR 335

Query: 110 IQSNGPNA--------SACSRKNSNLSAIAEAMLAQKNVESVLF 3
           IQ+NG  A        S  S K ++L A+   MLAQKNVESVLF
Sbjct: 336 IQANGIIAKRHGIVEKSKKSNKKADLLAMTAEMLAQKNVESVLF 379


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