BLASTX nr result

ID: Coptis25_contig00028316 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028316
         (756 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264175.1| PREDICTED: probable cytochrome b5 isoform 2 ...   108   8e-25
gb|AAT84461.1| cytochrome b5 isoform Cb5-D [Vernicia fordii]           96   1e-21
ref|XP_002893406.1| B5 #6 [Arabidopsis lyrata subsp. lyrata] gi|...    96   4e-21
gb|EAY91897.1| hypothetical protein OsI_13549 [Oryza sativa Indi...    88   5e-21
ref|NP_001235769.1| uncharacterized protein LOC100500537 [Glycin...    97   8e-21

>ref|XP_002264175.1| PREDICTED: probable cytochrome b5 isoform 2 [Vitis vinifera]
           gi|297738108|emb|CBI27309.3| unnamed protein product
           [Vitis vinifera]
          Length = 134

 Score =  108 bits (269), Expect(2) = 8e-25
 Identities = 54/112 (48%), Positives = 65/112 (58%), Gaps = 2/112 (1%)
 Frame = -1

Query: 432 WVVIDGKVYDVTTYLDEHPGGDDVLLNSTGRDATEDFNDAGHSRDAIQLMQEFCIGXXXX 253
           WVVIDGKVYDVTTYLDEHPGGDDV+L +TG+DAT+DF DAGHS DA +LM+ FC+G    
Sbjct: 23  WVVIDGKVYDVTTYLDEHPGGDDVILATTGKDATDDFEDAGHSNDARELMKSFCVGELDM 82

Query: 252 XXXXXXXXXXXXXXXXXXEV--LMNMTSQYWXXXXXXXXXXXXXXVLYLRKK 103
                                 L+N+T QYW               L++RKK
Sbjct: 83  SSPAIPELKISDKKQQTDVAQKLLNLTKQYWAVSVAIVGISVVAGFLFMRKK 134



 Score = 32.0 bits (71), Expect(2) = 8e-25
 Identities = 12/20 (60%), Positives = 18/20 (90%)
 Frame = -3

Query: 586 MPTLTKLYNLKEAGEHNTRD 527
           MPTLTKL++++EA  HN++D
Sbjct: 1   MPTLTKLFSMQEASLHNSKD 20


>gb|AAT84461.1| cytochrome b5 isoform Cb5-D [Vernicia fordii]
          Length = 134

 Score = 95.9 bits (237), Expect(2) = 1e-21
 Identities = 49/112 (43%), Positives = 63/112 (56%), Gaps = 2/112 (1%)
 Frame = -1

Query: 432 WVVIDGKVYDVTTYLDEHPGGDDVLLNSTGRDATEDFNDAGHSRDAIQLMQEFCIGXXXX 253
           W+VIDGKVYDV++YLDEHPGGDDV+L++ G+DAT+DF DAGHS+ A + ++ F IG    
Sbjct: 23  WIVIDGKVYDVSSYLDEHPGGDDVILSTIGKDATDDFEDAGHSKSAREQLESFFIGELDP 82

Query: 252 XXXXXXXXXXXXXXXXXXEV--LMNMTSQYWXXXXXXXXXXXXXXVLYLRKK 103
                              V  L ++T QYW               LYLRKK
Sbjct: 83  SVPVIPELEIYSKKQPAEYVQKLKDLTKQYWAVPVAIVGISVVVGFLYLRKK 134



 Score = 33.5 bits (75), Expect(2) = 1e-21
 Identities = 12/20 (60%), Positives = 18/20 (90%)
 Frame = -3

Query: 586 MPTLTKLYNLKEAGEHNTRD 527
           MPTLTKL+ ++EA +HNT++
Sbjct: 1   MPTLTKLFTMQEAAQHNTKE 20


>ref|XP_002893406.1| B5 #6 [Arabidopsis lyrata subsp. lyrata]
           gi|297339248|gb|EFH69665.1| B5 #6 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 135

 Score = 96.3 bits (238), Expect(2) = 4e-21
 Identities = 42/56 (75%), Positives = 51/56 (91%)
 Frame = -1

Query: 432 WVVIDGKVYDVTTYLDEHPGGDDVLLNSTGRDATEDFNDAGHSRDAIQLMQEFCIG 265
           WVVIDGKVYDVT+Y+DEHPGGDDVLL  TG+DAT+DF DAGHS+DA +LM+++ IG
Sbjct: 23  WVVIDGKVYDVTSYMDEHPGGDDVLLAVTGKDATDDFEDAGHSKDARELMEKYFIG 78



 Score = 31.6 bits (70), Expect(2) = 4e-21
 Identities = 12/20 (60%), Positives = 16/20 (80%)
 Frame = -3

Query: 586 MPTLTKLYNLKEAGEHNTRD 527
           MPTLTKLY+++E   HN +D
Sbjct: 1   MPTLTKLYSMEEVATHNKQD 20


>gb|EAY91897.1| hypothetical protein OsI_13549 [Oryza sativa Indica Group]
           gi|125587957|gb|EAZ28621.1| hypothetical protein
           OsJ_12608 [Oryza sativa Japonica Group]
          Length = 196

 Score = 88.2 bits (217), Expect(2) = 5e-21
 Identities = 38/56 (67%), Positives = 47/56 (83%)
 Frame = -1

Query: 432 WVVIDGKVYDVTTYLDEHPGGDDVLLNSTGRDATEDFNDAGHSRDAIQLMQEFCIG 265
           WVV+DGK+YDVT YLD+HPGG DVLL  TG+DA E+F+DAGHS  A +LMQ++ IG
Sbjct: 86  WVVVDGKIYDVTKYLDDHPGGADVLLEVTGKDAKEEFDDAGHSESAKELMQDYFIG 141



 Score = 39.3 bits (90), Expect(2) = 5e-21
 Identities = 17/36 (47%), Positives = 25/36 (69%)
 Frame = -3

Query: 634 GVRDSSSTLKKRRKKNMPTLTKLYNLKEAGEHNTRD 527
           G R   +  ++ R++ MPTLTKLY+L++A  HNT D
Sbjct: 48  GRRRLEAAEQREREEEMPTLTKLYSLEDAARHNTAD 83


>ref|NP_001235769.1| uncharacterized protein LOC100500537 [Glycine max]
           gi|255630583|gb|ACU15651.1| unknown [Glycine max]
          Length = 121

 Score = 97.1 bits (240), Expect(2) = 8e-21
 Identities = 47/110 (42%), Positives = 62/110 (56%)
 Frame = -1

Query: 432 WVVIDGKVYDVTTYLDEHPGGDDVLLNSTGRDATEDFNDAGHSRDAIQLMQEFCIGXXXX 253
           W+++DGKVYDVT YLD+HPGGDDV+L +TG+DATE+F DAGHS+ A + M+++CIG    
Sbjct: 23  WILVDGKVYDVTQYLDDHPGGDDVILAATGKDATEEFEDAGHSKSAREHMEQYCIGELDT 82

Query: 252 XXXXXXXXXXXXXXXXXXEVLMNMTSQYWXXXXXXXXXXXXXXVLYLRKK 103
                                + +T QYW               LYLRKK
Sbjct: 83  SSPISTKEK-----------FIQLTKQYWVVPATVVGISVVVAFLYLRKK 121



 Score = 29.6 bits (65), Expect(2) = 8e-21
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = -3

Query: 586 MPTLTKLYNLKEAGEHNTRD 527
           MPTLT  Y++K+  +H T+D
Sbjct: 1   MPTLTNFYSIKDLSQHTTKD 20


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