BLASTX nr result

ID: Coptis25_contig00028309 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028309
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321011.1| multidrug resistance protein ABC transporter...   162   3e-38
ref|XP_002301476.1| multidrug resistance protein ABC transporter...   162   3e-38
ref|XP_002523063.1| multidrug resistance-associated protein 2, 6...   159   2e-37
ref|XP_002880324.1| ATMRP4 [Arabidopsis lyrata subsp. lyrata] gi...   159   3e-37
ref|XP_004172997.1| PREDICTED: ABC transporter C family member 1...   158   4e-37

>ref|XP_002321011.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222861784|gb|EEE99326.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1507

 Score =  162 bits (409), Expect = 3e-38
 Identities = 72/120 (60%), Positives = 99/120 (82%)
 Frame = +1

Query: 22  DSRMKVTSEMLNNMRMIKLQAWEEHFYKRVQKFRDAEYNWLSKFMFTNSASVVLLWSTPA 201
           DSRMK T+EMLN MR+IK QAWE+HF KR+Q FRD+E+ W+SKF+++ S + +++WSTP 
Sbjct: 501 DSRMKATNEMLNYMRVIKFQAWEDHFNKRIQDFRDSEFGWISKFLYSISINTIVMWSTPL 560

Query: 202 IVTTLSFGTTIWLGFPLDSGTIFSAMSLIKILQEPIWGFPQALTSISQAMISLGRLDGYL 381
           +V+TL+FGT + LG PLD+GT+F+  S+ K+LQEPI  FPQA+ S+SQAM+SL RLD Y+
Sbjct: 561 LVSTLTFGTALLLGVPLDAGTVFTTTSIFKMLQEPIRVFPQAMISLSQAMVSLARLDCYM 620


>ref|XP_002301476.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222843202|gb|EEE80749.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1508

 Score =  162 bits (409), Expect = 3e-38
 Identities = 71/120 (59%), Positives = 99/120 (82%)
 Frame = +1

Query: 22  DSRMKVTSEMLNNMRMIKLQAWEEHFYKRVQKFRDAEYNWLSKFMFTNSASVVLLWSTPA 201
           DSRMK T+EMLN MR+IK QAWEEHF KR+Q FR++E+ W+SKF+++ S +++++WS P 
Sbjct: 502 DSRMKATNEMLNYMRVIKFQAWEEHFNKRIQNFRESEFGWISKFLYSISGNIIVMWSAPL 561

Query: 202 IVTTLSFGTTIWLGFPLDSGTIFSAMSLIKILQEPIWGFPQALTSISQAMISLGRLDGYL 381
           +V+TL+FGT + LG PLD+GT+F+  S+ KILQEPI  FPQ++ S+SQAM+SL RLD Y+
Sbjct: 562 LVSTLTFGTALLLGVPLDAGTVFTTTSVFKILQEPIRTFPQSMISLSQAMVSLSRLDRYM 621


>ref|XP_002523063.1| multidrug resistance-associated protein 2, 6 (mrp2, 6),
           abc-transoprter, putative [Ricinus communis]
           gi|223537625|gb|EEF39248.1| multidrug
           resistance-associated protein 2, 6 (mrp2, 6),
           abc-transoprter, putative [Ricinus communis]
          Length = 1506

 Score =  159 bits (403), Expect = 2e-37
 Identities = 70/120 (58%), Positives = 97/120 (80%)
 Frame = +1

Query: 22  DSRMKVTSEMLNNMRMIKLQAWEEHFYKRVQKFRDAEYNWLSKFMFTNSASVVLLWSTPA 201
           DSRMK T+EMLN MR+IK QAWEEHF KR+Q FR++E+ WLSKFM++ S +++++W TP 
Sbjct: 500 DSRMKATNEMLNYMRVIKFQAWEEHFNKRIQNFRESEFEWLSKFMYSVSGNIIVMWCTPL 559

Query: 202 IVTTLSFGTTIWLGFPLDSGTIFSAMSLIKILQEPIWGFPQALTSISQAMISLGRLDGYL 381
           +++T++FGT +  G PLD+GT+F+  S+ KILQ+PI  FPQ++ S SQAMISL RLD Y+
Sbjct: 560 LISTVTFGTALLFGVPLDAGTVFTTTSIFKILQDPIRSFPQSMISFSQAMISLERLDRYM 619


>ref|XP_002880324.1| ATMRP4 [Arabidopsis lyrata subsp. lyrata]
           gi|297326163|gb|EFH56583.1| ATMRP4 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1525

 Score =  159 bits (401), Expect = 3e-37
 Identities = 71/120 (59%), Positives = 97/120 (80%)
 Frame = +1

Query: 22  DSRMKVTSEMLNNMRMIKLQAWEEHFYKRVQKFRDAEYNWLSKFMFTNSASVVLLWSTPA 201
           DSRMK T+EMLN MR+IK QAWE HF KR+ KFRD E+ WLSKF+++ +A++++LWSTP 
Sbjct: 506 DSRMKATNEMLNYMRVIKFQAWENHFNKRILKFRDMEFGWLSKFLYSIAANIIVLWSTPV 565

Query: 202 IVTTLSFGTTIWLGFPLDSGTIFSAMSLIKILQEPIWGFPQALTSISQAMISLGRLDGYL 381
           +++ L+F T + LG  LD+GT+F+  ++ KILQEPI  FPQ++ S+SQAMISLGRLD Y+
Sbjct: 566 LISALTFATALALGVKLDAGTVFTTTTIFKILQEPIRTFPQSMISLSQAMISLGRLDSYM 625


>ref|XP_004172997.1| PREDICTED: ABC transporter C family member 14-like, partial
           [Cucumis sativus]
          Length = 1188

 Score =  158 bits (400), Expect = 4e-37
 Identities = 72/120 (60%), Positives = 99/120 (82%)
 Frame = +1

Query: 22  DSRMKVTSEMLNNMRMIKLQAWEEHFYKRVQKFRDAEYNWLSKFMFTNSASVVLLWSTPA 201
           DSRMK T+EMLNNMR+IK QAWEEHF +RV+ FR+ E+ WLSKFM++ S ++V+L S PA
Sbjct: 444 DSRMKATNEMLNNMRVIKFQAWEEHFQRRVETFRETEFKWLSKFMYSVSTTMVVLGSAPA 503

Query: 202 IVTTLSFGTTIWLGFPLDSGTIFSAMSLIKILQEPIWGFPQALTSISQAMISLGRLDGYL 381
           +++T++FG  I LG  LD+GT+F+ MSL +++QEPI  FPQ+L S+SQA+ISLGRLD ++
Sbjct: 504 LISTVTFGCAILLGIQLDAGTVFTVMSLFRLVQEPIRNFPQSLISLSQAVISLGRLDSFM 563


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