BLASTX nr result
ID: Coptis25_contig00028306
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00028306 (1022 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana] 79 4e-13 gb|AAD20101.1| putative retroelement pol polyprotein [Arabidopsi... 77 4e-13 emb|CAN70061.1| hypothetical protein VITISV_025665 [Vitis vinifera] 80 6e-13 gb|AAD15474.1| putative retroelement pol polyprotein [Arabidopsi... 77 7e-13 emb|CAN69143.1| hypothetical protein VITISV_027770 [Vitis vinifera] 79 1e-12 >gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana] Length = 1838 Score = 79.3 bits (194), Expect(2) = 4e-13 Identities = 38/80 (47%), Positives = 50/80 (62%) Frame = +2 Query: 737 IKRIIEVYIEDMVXXXXXXXXXXXXXXTIFRIFKEFNMKPNPEKCTFGVSSGKYLGYIVM 916 I R +EVYI+DM+ F + + MK NP KCTFGV+SG++LGY+V Sbjct: 970 IGRTVEVYIDDMLVKSLKPEDHVEHLSKCFDVLNTYGMKLNPTKCTFGVTSGEFLGYVVT 1029 Query: 917 KRGINANPDQIRAL*QMSSP 976 KRGI ANP QIRA+ ++ SP Sbjct: 1030 KRGIEANPKQIRAILELPSP 1049 Score = 21.9 bits (45), Expect(2) = 4e-13 Identities = 8/11 (72%), Positives = 11/11 (100%) Frame = +1 Query: 988 KQIQRLTGRIA 1020 +++QRLTGRIA Sbjct: 1053 REVQRLTGRIA 1063 >gb|AAD20101.1| putative retroelement pol polyprotein [Arabidopsis thaliana] Length = 764 Score = 77.4 bits (189), Expect(2) = 4e-13 Identities = 37/81 (45%), Positives = 49/81 (60%) Frame = +2 Query: 743 RIIEVYIEDMVXXXXXXXXXXXXXXTIFRIFKEFNMKPNPEKCTFGVSSGKYLGYIVMKR 922 + +EVYI+DM+ F ++NMK NP KC FGV+SG++LGYIV KR Sbjct: 645 KTMEVYIDDMLVKSTRSADHIDHLKACFETLNKYNMKLNPAKCLFGVTSGEFLGYIVTKR 704 Query: 923 GINANPDQIRAL*QMSSPTTR 985 GI ANP QIRA+ + SP + Sbjct: 705 GIEANPKQIRAILDLQSPRNK 725 Score = 23.9 bits (50), Expect(2) = 4e-13 Identities = 9/12 (75%), Positives = 12/12 (100%) Frame = +1 Query: 985 RKQIQRLTGRIA 1020 +K++QRLTGRIA Sbjct: 725 KKEVQRLTGRIA 736 >emb|CAN70061.1| hypothetical protein VITISV_025665 [Vitis vinifera] Length = 685 Score = 80.5 bits (197), Expect = 6e-13 Identities = 38/96 (39%), Positives = 60/96 (62%) Frame = +2 Query: 728 RKLIKRIIEVYIEDMVXXXXXXXXXXXXXXTIFRIFKEFNMKPNPEKCTFGVSSGKYLGY 907 + L+ RI+EVYI+D+V +F++ ++++MK NP KC FGVS+GK+LG+ Sbjct: 152 KPLVGRIVEVYIDDIVVKSKTREEHVLHLQEVFQLLRKYDMKLNPSKCAFGVSAGKFLGF 211 Query: 908 IVMKRGINANPDQIRAL*QMSSPTTRGNKSKD*LEG 1015 +V +RGI +PDQ++A+ M +P R K L G Sbjct: 212 MVSQRGIEVSPDQVKAV--METPPPRSKKELQRLTG 245 >gb|AAD15474.1| putative retroelement pol polyprotein [Arabidopsis thaliana] Length = 1466 Score = 77.0 bits (188), Expect(2) = 7e-13 Identities = 38/80 (47%), Positives = 48/80 (60%) Frame = +2 Query: 737 IKRIIEVYIEDMVXXXXXXXXXXXXXXTIFRIFKEFNMKPNPEKCTFGVSSGKYLGYIVM 916 + + +EVYI+DM+ F I ++ MK NP KCTFGV SG++LGYIV Sbjct: 610 VGKTMEVYIDDMLIKSLKKEDHVKHLEECFAILNQYQMKLNPAKCTFGVPSGEFLGYIVT 669 Query: 917 KRGINANPDQIRAL*QMSSP 976 KRGI ANP+QI A M SP Sbjct: 670 KRGIEANPNQINAFLNMPSP 689 Score = 23.5 bits (49), Expect(2) = 7e-13 Identities = 10/19 (52%), Positives = 14/19 (73%) Frame = +1 Query: 964 NVVTNNKRKQIQRLTGRIA 1020 N+ + K++QRLTGRIA Sbjct: 685 NMPSPKNFKEVQRLTGRIA 703 >emb|CAN69143.1| hypothetical protein VITISV_027770 [Vitis vinifera] Length = 622 Score = 79.3 bits (194), Expect = 1e-12 Identities = 40/107 (37%), Positives = 63/107 (58%) Frame = +2 Query: 665 PISQRLVPMTQKFLGFSVFFSRKLIKRIIEVYIEDMVXXXXXXXXXXXXXXTIFRIFKEF 844 P + V T + L +F + LI ++EVYI+D+V +F + +++ Sbjct: 24 PFGLKNVGATYQRLMTKIF--KPLIGDVVEVYIDDVVVKSKTRSEHTQHLQKVFHLLRKY 81 Query: 845 NMKPNPEKCTFGVSSGKYLGYIVMKRGINANPDQIRAL*QMSSPTTR 985 MK NP KC FGVSSGK+LG++V +RGI NP+Q++A+ M +PT + Sbjct: 82 GMKLNPAKCAFGVSSGKFLGFMVTQRGIEINPNQVKAVANMLAPTNK 128