BLASTX nr result

ID: Coptis25_contig00028291 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028291
         (450 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280214.1| PREDICTED: nudix hydrolase 8-like [Vitis vin...    75   4e-12
ref|XP_002514190.1| mutt domain protein, putative [Ricinus commu...    68   7e-10
ref|XP_002330497.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
gb|ABD64957.1| hydrolase, NUDIX family protein [Brassica oleracea]     57   1e-06
gb|AAM78094.1| AT5g47240/MQL5_10 [Arabidopsis thaliana] gi|23308...    56   3e-06

>ref|XP_002280214.1| PREDICTED: nudix hydrolase 8-like [Vitis vinifera]
          Length = 346

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 54/136 (39%), Positives = 70/136 (51%), Gaps = 6/136 (4%)
 Frame = -3

Query: 391 MSTVNEGSLFPGPYSVRWSSYPIPYSTRTLNLSVPKRGVLGKQLLSTISVGRQNSSFNNS 212
           M    +G  F G Y   +S  P      + +     RG   K L   +     NSS  NS
Sbjct: 1   MEAAVKGWHFSGLYCQSYSEKPRVSWRESCSFQGLSRGFWRKTLPLEV-----NSSEPNS 55

Query: 211 KSLFQDRQLCKGGKAL------VVSPNISSPHTKLELLDAYDDEYEGVIIDPVCLPSSAN 50
            S+       +GG  L      V+SP+ISSP   +E LDA++DEY+GV+I+P  LPSSAN
Sbjct: 56  SSI----PSLRGGYVLRRKGIQVLSPHISSPSVPVEFLDAWEDEYDGVVINPENLPSSAN 111

Query: 49  AFASLLQASQFEWRLK 2
           AFAS L+AS   W LK
Sbjct: 112 AFASALRASMSNWELK 127


>ref|XP_002514190.1| mutt domain protein, putative [Ricinus communis]
           gi|223546646|gb|EEF48144.1| mutt domain protein,
           putative [Ricinus communis]
          Length = 343

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 47/129 (36%), Positives = 66/129 (51%)
 Frame = -3

Query: 391 MSTVNEGSLFPGPYSVRWSSYPIPYSTRTLNLSVPKRGVLGKQLLSTISVGRQNSSFNNS 212
           M+T+  GS  PG     W    +P ++ T      +   +G +LL  I     +  F  S
Sbjct: 4   MATIVTGSQLPG--HCHWHYRRMPATSSTTKNCFSR---VGARLLK-IPTAEHDFPFKPS 57

Query: 211 KSLFQDRQLCKGGKALVVSPNISSPHTKLELLDAYDDEYEGVIIDPVCLPSSANAFASLL 32
                   +    +  V SP++SSP  K+E+LDA DDEY G +IDP  LPSSANAFA+ L
Sbjct: 58  LG---GGHMLNNRRLHVTSPDVSSPGLKVEILDALDDEYGGCVIDPNSLPSSANAFATSL 114

Query: 31  QASQFEWRL 5
           + S   W+L
Sbjct: 115 RFSLSNWKL 123


>ref|XP_002330497.1| predicted protein [Populus trichocarpa] gi|222872431|gb|EEF09562.1|
           predicted protein [Populus trichocarpa]
          Length = 281

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 35/56 (62%), Positives = 44/56 (78%), Gaps = 2/56 (3%)
 Frame = -3

Query: 163 VVSPNISSPHTKLEL--LDAYDDEYEGVIIDPVCLPSSANAFASLLQASQFEWRLK 2
           VVSP+ISSP     +  L+A+DDEY+GVIIDP  LPSSANAFAS L+A+  +W+LK
Sbjct: 8   VVSPDISSPSPGFAVGFLEAFDDEYDGVIIDPNKLPSSANAFASALRAALSKWKLK 63


>gb|ABD64957.1| hydrolase, NUDIX family protein [Brassica oleracea]
          Length = 366

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 40/111 (36%), Positives = 58/111 (52%)
 Frame = -3

Query: 334 SYPIPYSTRTLNLSVPKRGVLGKQLLSTISVGRQNSSFNNSKSLFQDRQLCKGGKALVVS 155
           S+  P+S  T++       V+G + +S+ SV    S +   +SL            L + 
Sbjct: 22  SFRQPFSGVTISPKFCHSKVVGSRAISS-SVSSTKSQYVYGESLAATADSDYKMNGLTLK 80

Query: 154 PNISSPHTKLELLDAYDDEYEGVIIDPVCLPSSANAFASLLQASQFEWRLK 2
             ISS   +L LLDA+DDEY GV++D   LPSS   F S+LQ+S  +WR K
Sbjct: 81  NRISSVKERL-LLDAFDDEYGGVVVDHGKLPSSPTVFTSMLQSSLSDWRRK 130


>gb|AAM78094.1| AT5g47240/MQL5_10 [Arabidopsis thaliana] gi|23308325|gb|AAN18132.1|
           At5g47240/MQL5_10 [Arabidopsis thaliana]
          Length = 369

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 40/99 (40%), Positives = 51/99 (51%), Gaps = 10/99 (10%)
 Frame = -3

Query: 268 KQLLSTISVGRQNSSFNNSKSLF----------QDRQLCKGGKALVVSPNISSPHTKLEL 119
           K  LS +   +  SS +N+KS F           D      G  L     +SS   +  L
Sbjct: 36  KFYLSKVDGPKAISSSSNTKSQFVYGGGSIAATSDSGYKMNGVNLKSRTLMSSAVKERSL 95

Query: 118 LDAYDDEYEGVIIDPVCLPSSANAFASLLQASQFEWRLK 2
           LDAYDDEY GVI+D   LPS+  AFAS+L+AS  +WR K
Sbjct: 96  LDAYDDEYGGVIVDHGKLPSNPYAFASMLRASLSDWRRK 134


Top