BLASTX nr result

ID: Coptis25_contig00028287 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028287
         (1836 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305092.1| glutamate-gated kainate-type ion channel rec...   561   e-157
ref|XP_002522526.1| glutamate receptor 2 plant, putative [Ricinu...   560   e-157
ref|XP_002305093.1| glutamate-gated kainate-type ion channel rec...   556   e-156
ref|XP_002272216.1| PREDICTED: glutamate receptor 2.7-like [Viti...   553   e-155
emb|CAN63664.1| hypothetical protein VITISV_034689 [Vitis vinifera]   553   e-155

>ref|XP_002305092.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
            [Populus trichocarpa] gi|222848056|gb|EEE85603.1|
            glutamate-gated kainate-type ion channel receptor subunit
            GluR5 [Populus trichocarpa]
          Length = 942

 Score =  561 bits (1446), Expect = e-157
 Identities = 293/577 (50%), Positives = 403/577 (69%), Gaps = 10/577 (1%)
 Frame = +1

Query: 136  ITHIGAIIDVNSRIGKEENISMEIAIQNFNKASGNKKTLVLHVSDSGGNPLQASTAAENL 315
            +T+IGAIIDVNSRIGKEE  ++E+A+Q+FN  S N + L LH    G +PLQ + AAE L
Sbjct: 55   VTNIGAIIDVNSRIGKEEKTALELAVQDFNDISTNHE-LSLHFRHPGEDPLQVAYAAEEL 113

Query: 316  IKQKQVQAIIGMETWQEAALVAEVSKRIRVPILSFAAPSITPPLTSVRWPFLVRMVNNDS 495
            IK+K+V+ IIGM+ W+EAALVA +  + ++PILSFA P+ITPPLT++RWPFL+RM ++ S
Sbjct: 114  IKEKKVKVIIGMDNWEEAALVANIGNQYQIPILSFATPAITPPLTTLRWPFLIRMASDGS 173

Query: 496  LQVQCIASIVGSYDWRRVIVIYEDDSYSTTDSGILTLLSDALQAVGSEVEHWSAFPPFSS 675
             Q++CIA++V  ++WR+V+VIYED+ Y   +SG L LLS+ALQ VGSE+E+    PPFS 
Sbjct: 174  EQMRCIAALVRCHNWRKVVVIYEDNVYG-GESGNLALLSEALQEVGSEIEYRLVLPPFSL 232

Query: 676  LSDPNSFIREELEKINKYKQSRVFIIVRSSLELATRIITEAKQIGFMGRDSVWITADSVT 855
             +DP   ++ EL K+ K  +SRVFI+++SSL + T +  EAK +G +GRD+ WI ++SVT
Sbjct: 233  STDPEDVVQHELIKLQKDTESRVFIVLQSSLPMLTCLFREAKNMGLVGRDTAWIVSNSVT 292

Query: 856  NQFDIVNSSVMSSMQGIIGIRTPFSETSPSFKDFSIQFRNLFRSTDPQEDKSEPGIYALR 1035
            +  D +N+SV+SSM G +GI+T +S +S S++ F  QFR +FR+    ED   PGI ALR
Sbjct: 293  SFLDSMNNSVISSMGGTLGIQTYYSSSS-SYQRFEAQFRKIFRAEYLDEDNFLPGIQALR 351

Query: 1036 AYDTISTIGLAMEK-STDISTSAALLDNILSSNFTGLSGQIQFQNRELSCFTTYEVVNVV 1212
            AYD+I  +  A+EK  +D S+   LL+++L S+FTGL+G+I F++  LS      +VNVV
Sbjct: 352  AYDSIGMVTQAIEKLGSDSSSPKMLLNSVLGSDFTGLTGEIHFKDAMLSQAPILRIVNVV 411

Query: 1213 GKSYNRLKFWSPEYGFTDEVIDGKMSQEKSTKSLLDDL------VHWPGGLR-RVPLGWV 1371
            GK Y  L FW P +GF+  +   +  +  S  ++ ++       V WPG L  R P GW 
Sbjct: 412  GKKYKELDFWLPNFGFSKTLHPQEGKERCSNSNVCNNTGCLAGPVIWPGDLNGRNPKGWA 471

Query: 1372 MPNAANPMVIGIPGRTSFEKFVKVKEGED-PTGFCIDVFNNAVSRLKYDLPHIFKSVNTA 1548
            MP  A P+ I +P RTSF+KFV  + GE  P GFCIDVFN  V RL Y LPH F   +  
Sbjct: 472  MPTNAKPLRIVVPKRTSFDKFVTFQTGEALPEGFCIDVFNEVVERLNYPLPHEFFEHD-- 529

Query: 1549 PGLYNDLVDQVYLGKFDAAVGDITILANRTNYVEFTQPYAESGLTMVVPVKSEEKAWLFA 1728
             GLY+D++  VY   +DAA+GDITILA RT YVEFTQPYAESGL+M+VP+++E+  W+F 
Sbjct: 530  -GLYDDMIAGVYNKTYDAAIGDITILAERTKYVEFTQPYAESGLSMIVPLENEDATWIFT 588

Query: 1729 KPFSAAMWLAVSIALMYTMFVVWFLEHR-SNPEFRGP 1836
            KPF+  MW+      +YTM +VWFLEH+ SNPEFRGP
Sbjct: 589  KPFNLEMWIVSGAIFIYTMLIVWFLEHQSSNPEFRGP 625


>ref|XP_002522526.1| glutamate receptor 2 plant, putative [Ricinus communis]
            gi|223538217|gb|EEF39826.1| glutamate receptor 2 plant,
            putative [Ricinus communis]
          Length = 843

 Score =  560 bits (1443), Expect = e-157
 Identities = 292/550 (53%), Positives = 389/550 (70%), Gaps = 4/550 (0%)
 Frame = +1

Query: 199  MEIAIQNFNKASGNKKTLVLHVSDSGGNPLQASTAAENLIKQKQVQAIIGMETWQEAALV 378
            M+IA++NFN AS  K  L LH  D    PLQA+ AAE LIK+K V+AIIGM+ W+EAALV
Sbjct: 1    MDIAVRNFNNAS-RKHKLSLHFQDHQRQPLQAAQAAERLIKKKAVKAIIGMDIWEEAALV 59

Query: 379  AEVSKRIRVPILSFAAPSITPPLTSVRWPFLVRMVNNDSLQVQCIASIVGSYDWRRVIVI 558
            A++  + +VP+ SF+AP+ TPPL   RWPFLVRMV N+S Q++CIA +   Y+WRRV+ +
Sbjct: 60   ADIGSQSQVPVFSFSAPATTPPLAQSRWPFLVRMVYNNSEQMRCIAELARLYNWRRVVTV 119

Query: 559  YEDDSYSTTDSGILTLLSDALQAVGSEVEHWSAFPPFSSLSDPNSFIREELEKINKYKQS 738
            +ED++ +  D G L LLS ALQ VGS++EH    PPFS   DP   I+EEL K+ + K S
Sbjct: 120  HEDNT-NGGDFGELILLSQALQEVGSQIEHSLVLPPFSLPFDPKEIIKEELTKLQEVK-S 177

Query: 739  RVFIIVRSSLELATRIITEAKQIGFMGRDSVWITADSVTNQFDIVNSSVMSSMQGIIGIR 918
            RVFI++++SL LA  ++ EAK++G +G+DSVWI  D+VT+  D V++SV+ +M+G +GI+
Sbjct: 178  RVFIVLQTSLPLAIHLLREAKEMGMVGKDSVWILTDTVTSFLDSVDTSVILTMEGALGIK 237

Query: 919  TPFSETSPSFKDFSIQFRNLFRSTDPQEDKSEPGIYALRAYDTISTIGLAMEK-STDIST 1095
            T +S++S  +K F  QFR  F ST P+ED  +PG YALRAYD+I+TI  AME+ S++IS 
Sbjct: 238  TNYSDSSSEYKSFYSQFRRNFSSTYPEEDNFDPGFYALRAYDSITTIIKAMERMSSNISN 297

Query: 1096 SAALLDNILSSNFTGLSGQIQFQNRELSCFTTYEVVNVVGKSYNRLKFWSPEYGFTDEVI 1275
            S   L++ILSSNFTGLSGQI F++ EL       +VNVVGK Y  + FW P++GF+    
Sbjct: 298  SKVFLNDILSSNFTGLSGQIHFRSGELLHSPKLRIVNVVGKKYKEIDFWLPKFGFSKGRK 357

Query: 1276 DGKMSQEKSTKSL-LDDLVHWPGGLRRVPLGWVMPNAANPMVIGIPGRTSFEKFVKVKEG 1452
            D +   E    S+ L+  V+WPG L+R+P GW MP+ A PM+IG+PGRTSFEKFVKV   
Sbjct: 358  DDE--DENGGGSMGLEGPVNWPGDLKRIPKGWAMPSNAKPMIIGVPGRTSFEKFVKVVNA 415

Query: 1453 EDPT--GFCIDVFNNAVSRLKYDLPHIFKSVNTAPGLYNDLVDQVYLGKFDAAVGDITIL 1626
             +    G+CI++F      L Y L H F   N   G+Y+DLV+ +Y   +DA VGDITIL
Sbjct: 416  SENRYDGYCIELFRKVTEVLGYSLYHRFVPYN---GIYDDLVNHLYNKTYDAIVGDITIL 472

Query: 1627 ANRTNYVEFTQPYAESGLTMVVPVKSEEKAWLFAKPFSAAMWLAVSIALMYTMFVVWFLE 1806
            A R++ VEFTQPYAESGL+MVV VKSEE AW+F KPF+  MW      L+YTMF+VWFLE
Sbjct: 473  AERSDKVEFTQPYAESGLSMVVTVKSEESAWMFMKPFTWEMWAVTGAILIYTMFIVWFLE 532

Query: 1807 HRSNPEFRGP 1836
            H++NPEFRGP
Sbjct: 533  HQTNPEFRGP 542


>ref|XP_002305093.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
            [Populus trichocarpa] gi|222848057|gb|EEE85604.1|
            glutamate-gated kainate-type ion channel receptor subunit
            GluR5 [Populus trichocarpa]
          Length = 931

 Score =  556 bits (1434), Expect = e-156
 Identities = 289/585 (49%), Positives = 392/585 (67%), Gaps = 7/585 (1%)
 Frame = +1

Query: 103  HGVTVISAENDITHIGAIIDVNSRIGKEENISMEIAIQNFNKASGNKKTLVLHVSDSGGN 282
            HG   I+ ++ +T+IGAIIDVNSR GKEE  +MEIA+Q FN  S   K L L+  DS  +
Sbjct: 41   HGAKDIN-DSKVTNIGAIIDVNSRTGKEEKTAMEIAVQKFNNGSPKHK-LSLYFQDSRSS 98

Query: 283  PLQASTAAENLIKQKQVQAIIGMETWQEAALVAEVSKRIRVPILSFAAPSITPPLTSVRW 462
            PLQA+ AAE LI++ +V+ IIGME W+EAALVA++  + +VP++SF+AP+ITPPL S RW
Sbjct: 99   PLQAARAAEKLIEENEVEVIIGMERWEEAALVADIGSQFKVPVISFSAPAITPPLASSRW 158

Query: 463  PFLVRMVNNDSLQVQCIASIVGSYDWRRVIVIYEDDSYSTTDSGILTLLSDALQAVGSEV 642
            PFL+RM + DS Q++CIA+++ SY+WRRV+ +YED +Y                    E+
Sbjct: 159  PFLIRMAHGDSNQIRCIAAVIQSYNWRRVVTVYEDYAY-------------------GEI 199

Query: 643  EHWSAFPPFSSLSDPNSFIREELEKINKYK-QSRVFIIVRSSLELATRIITEAKQIGFMG 819
            E+    PPFS +SDP   +REEL K+   K QSRVFI+++SSL +   +  EAK++G +G
Sbjct: 200  EYNLVLPPFSFVSDPKDVVREELTKLLSEKIQSRVFIVLQSSLPMMIHLFREAKKMGLVG 259

Query: 820  RDSVWITADSVTNQFDIVNSSVMSSMQGIIGIRTPFSETSPSFKDFSIQFRNLFRSTDPQ 999
             D VWI  D+VTN  DIVN+SV+ SM+G +GI+  + + + SF+ F  QFR  F S  P+
Sbjct: 260  NDMVWILTDTVTNFLDIVNTSVIHSMEGALGIKNYYFDNTSSFQTFLTQFRQKFISEYPE 319

Query: 1000 EDKSEPGIYALRAYDTISTIGLAMEK-STDISTSAALLDNILSSNFTGLSGQIQFQNREL 1176
            E   EPG YALRA+D+IS I  AM++ S++  +  + LDN  +++F GLSG+I  +  EL
Sbjct: 320  ECCYEPGFYALRAHDSISIITQAMDRLSSNTRSPKSFLDNTFTTSFVGLSGEINVKAGEL 379

Query: 1177 SCFTTYEVVNVVGKSYNRLKFWSPEYGFTDEVIDGKMSQEKSTKSL-LDDLVHWPGGLRR 1353
                   +VNVVG+ Y  L FW PE+GF+++ +  K   E  T+++ L   V WPG L+R
Sbjct: 380  LHSPMLRIVNVVGRRYKELDFWIPEFGFSNQPVVAKDGAENRTEAIRLKGPVIWPGDLQR 439

Query: 1354 VPLGWVMPNAANPMVIGIPGRTSFEKFVKVKEG----EDPTGFCIDVFNNAVSRLKYDLP 1521
             P GW+MPN    M+IG+PGRTSFEKFVKV       ++  GFCI++F   +  L YDLP
Sbjct: 440  NPKGWLMPNDTKRMIIGVPGRTSFEKFVKVSTNAAGKKEYDGFCIELFYKVLGVLAYDLP 499

Query: 1522 HIFKSVNTAPGLYNDLVDQVYLGKFDAAVGDITILANRTNYVEFTQPYAESGLTMVVPVK 1701
            + F   N   G Y+DLVD VY   +DA VGD+TILA+R   VEFTQPYAESGL+M+VP K
Sbjct: 500  YQFIPYN---GTYDDLVDHVYNKTYDAIVGDVTILASRAEKVEFTQPYAESGLSMIVPAK 556

Query: 1702 SEEKAWLFAKPFSAAMWLAVSIALMYTMFVVWFLEHRSNPEFRGP 1836
             +E AW+F KPF+  MWL     L+YTMF+VWFLEH +NPEF GP
Sbjct: 557  YKESAWMFMKPFTKEMWLVTGAVLIYTMFIVWFLEHHTNPEFNGP 601


>ref|XP_002272216.1| PREDICTED: glutamate receptor 2.7-like [Vitis vinifera]
          Length = 916

 Score =  553 bits (1424), Expect = e-155
 Identities = 291/585 (49%), Positives = 403/585 (68%), Gaps = 12/585 (2%)
 Frame = +1

Query: 115  VISAENDITHIGAIIDVNSRIGKEENISMEIAIQNFNKASGNKKTLVLHVSDSGGNPLQA 294
            +I+A+   T+IGAI+D +SR GKEE  +MEIAI  FN+ S N + L LH  +S G P+QA
Sbjct: 33   IIAADYKPTNIGAIVDASSRKGKEEKTAMEIAISRFNRDSKNLQ-LFLHFGNSTGEPIQA 91

Query: 295  STAAENLIKQKQVQAIIGMETWQEAALVAEVSKRIRVPILSFAAPSITPPLTSVRWPFLV 474
            +  A+ LIK+K+V  I+G +TWQEAALVA+V  R +VP+LS AA +ITPPL  +RWPFL 
Sbjct: 92   AFTAQELIKEKEVGVIVGTDTWQEAALVADVGNRAQVPVLSLAASTITPPLRQIRWPFLT 151

Query: 475  RMVNNDSLQVQCIASIVGSYDWRRVIVIYEDDSYSTTDSGILTLLSDALQAVGSEVEHWS 654
            +M +N S Q++CI++IVGSY W+RVIV+YEDD++   DSG+L  LS+ALQ   +E+E+  
Sbjct: 152  QMGSNVSEQIRCISAIVGSYHWQRVIVVYEDDAHG-GDSGMLAPLSEALQYFSTEIEYTV 210

Query: 655  AFPPFSSLSDPNSFIREELEKINKYKQSRVFIIVRSSLELATRIITEAKQIGFMGRDSVW 834
              PP SSLSDP   I EEL K+    QSRVFI+++SS  +AT +  EA+++GFM R+S W
Sbjct: 211  VLPPISSLSDPKEAINEELMKLLSI-QSRVFIVLKSSPLMATHLFQEARRMGFMARESAW 269

Query: 835  ITADSVTNQFDIVNSSVMSSMQGIIGIRTPFSETSPSFKDFSIQFRNLFRSTDPQEDKSE 1014
            I  D++++  D +++S +S ++G +GI+T +S+TS  F +FS QF+ +F +  P+ED ++
Sbjct: 270  IITDTISSFLDSIDTSAISYIEGALGIKTYYSKTSRPFLEFSAQFQKMFENEYPEEDNTK 329

Query: 1015 PGIYALRAYDTISTIGLAMEK-STDISTSAALLDNILSSNFTGLSGQIQFQNREL--SCF 1185
            PGI+ALRAYD+IS I  A+ + ++D  T   LL+ ILSSNF GLSG+I FQ  +   S  
Sbjct: 330  PGIHALRAYDSISVIANALVRLASDTITPKRLLETILSSNFNGLSGKISFQGGDQLDSNS 389

Query: 1186 TTYEVVNVVGKSYNRLKFWSPEYGFTDEVIDGKMSQEKSTKSLLDDLVHWPGGLRRVPLG 1365
                ++N+VGK Y  L FW+ +         G+ +  + T  +LD  V WPG L+RVP G
Sbjct: 390  LPLRIINLVGKGYKELDFWTQDLDHPFSREGGEANSSRRTTKVLDGPVIWPGYLKRVPKG 449

Query: 1366 WVMPNAANPMVIGIPGRTSFEKFVKVKEGE-DP----TGFCIDVFNNAVSRLK--YDLPH 1524
            W MP     + IGIP  TSF+KFVKV E + DP    TGFCID+F   +  L+  Y LP+
Sbjct: 450  WEMPTDEKRLKIGIPANTSFDKFVKVDEAQIDPEKKYTGFCIDIFREVIKILEQNYSLPY 509

Query: 1525 IFKSVNTAPGLYNDLVDQVYLGKFDAAVGDITILANRTNYVEFTQPYAESGLTMVVPVKS 1704
             F   +   G Y++LVD+VY   +DA VGD+TILANR+  VEFTQP+AESGL+M+ PVKS
Sbjct: 510  DFHPYD---GTYDELVDRVYTKTYDAVVGDMTILANRSRIVEFTQPFAESGLSMITPVKS 566

Query: 1705 EE--KAWLFAKPFSAAMWLAVSIALMYTMFVVWFLEHRSNPEFRG 1833
             E  KAWLF KPF+  MW+   + L+YTMF+VW LEH++NPEF+G
Sbjct: 567  REAYKAWLFMKPFTMEMWVVTGVILIYTMFIVWILEHQNNPEFQG 611


>emb|CAN63664.1| hypothetical protein VITISV_034689 [Vitis vinifera]
          Length = 916

 Score =  553 bits (1424), Expect = e-155
 Identities = 292/585 (49%), Positives = 402/585 (68%), Gaps = 12/585 (2%)
 Frame = +1

Query: 115  VISAENDITHIGAIIDVNSRIGKEENISMEIAIQNFNKASGNKKTLVLHVSDSGGNPLQA 294
            +I+A+   T+IGAI+D +SR GKEE  +MEIAI  FN+ S N + L LH  +S G P+QA
Sbjct: 33   IIAADYKPTNIGAIVDASSRKGKEEKTAMEIAISRFNRDSKNLQ-LFLHFGNSTGEPIQA 91

Query: 295  STAAENLIKQKQVQAIIGMETWQEAALVAEVSKRIRVPILSFAAPSITPPLTSVRWPFLV 474
            +  A+ LIK+K+V  I+G +TWQEAALVA+V  R +VP+LS AA +ITPPL  +RWPFL 
Sbjct: 92   AFTAQELIKEKEVGVIVGTDTWQEAALVADVGNRAQVPVLSLAASTITPPLRQIRWPFLX 151

Query: 475  RMVNNDSLQVQCIASIVGSYDWRRVIVIYEDDSYSTTDSGILTLLSDALQAVGSEVEHWS 654
             M +N S Q++CI++IVGSY W+RVIV+YEDD++   DSG+L  LS+ALQ   SE+E+  
Sbjct: 152  XMGSNVSEQIRCISAIVGSYHWQRVIVVYEDDAHG-GDSGMLAPLSEALQYFSSEIEYTV 210

Query: 655  AFPPFSSLSDPNSFIREELEKINKYKQSRVFIIVRSSLELATRIITEAKQIGFMGRDSVW 834
              PP SSLSDP   I EEL K+    QSRVFI+++SS  +AT +  EA+++GFM R+S W
Sbjct: 211  VLPPISSLSDPKEAINEELMKLLSI-QSRVFIVLKSSPLMATHLFQEARRMGFMARESAW 269

Query: 835  ITADSVTNQFDIVNSSVMSSMQGIIGIRTPFSETSPSFKDFSIQFRNLFRSTDPQEDKSE 1014
            I  D++++  D +++S +S ++G +GI+T +S+TS  F +FS QF+ +F +  P+ED ++
Sbjct: 270  IITDTISSFLDSIDTSAISYIEGALGIKTYYSKTSRPFLEFSAQFQKMFENEYPEEDNTK 329

Query: 1015 PGIYALRAYDTISTIGLAMEK-STDISTSAALLDNILSSNFTGLSGQIQFQNREL--SCF 1185
            PGI+ALRAYD+IS I  A+ + ++D  T   LL+ ILSSNF GLSG+I FQ  +   S  
Sbjct: 330  PGIHALRAYDSISVIANALVRLASDTITPKRLLETILSSNFNGLSGKISFQGGDQLDSNS 389

Query: 1186 TTYEVVNVVGKSYNRLKFWSPEYGFTDEVIDGKMSQEKSTKSLLDDLVHWPGGLRRVPLG 1365
                ++N+VGK Y  L FW+ +         G+ +  + T  +LD  V WPG L+RVP G
Sbjct: 390  LPLRIINLVGKGYKELDFWTQDLDHPFSREGGEANSSRRTTKVLDGPVIWPGYLKRVPKG 449

Query: 1366 WVMPNAANPMVIGIPGRTSFEKFVKVKEGE-DP----TGFCIDVFNNAVSRLK--YDLPH 1524
            W MP     + IGIP  TSF+KFVKV E + DP    TGFCID+F   +  L+  Y LP+
Sbjct: 450  WEMPTDEKRLKIGIPANTSFDKFVKVDEAQIDPEKKYTGFCIDIFREVIKILEQNYSLPY 509

Query: 1525 IFKSVNTAPGLYNDLVDQVYLGKFDAAVGDITILANRTNYVEFTQPYAESGLTMVVPVKS 1704
             F   +   G Y++LVD+VY   +DA VGD+TILANR+  VEFTQP+AESGL+M+ PVKS
Sbjct: 510  DFHPYD---GTYDELVDRVYTKTYDAVVGDMTILANRSRIVEFTQPFAESGLSMITPVKS 566

Query: 1705 EE--KAWLFAKPFSAAMWLAVSIALMYTMFVVWFLEHRSNPEFRG 1833
             E  KAWLF KPF+  MW+   + L+YTMF+VW LEH++NPEF+G
Sbjct: 567  REAYKAWLFMKPFTMEMWVVTGVILIYTMFIVWILEHQNNPEFQG 611


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