BLASTX nr result

ID: Coptis25_contig00028277 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028277
         (500 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332012.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07
ref|XP_002332009.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07
ref|XP_002522185.1| conserved hypothetical protein [Ricinus comm...    56   3e-06
ref|XP_002326773.1| predicted protein [Populus trichocarpa] gi|2...    55   4e-06
ref|XP_002331999.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06

>ref|XP_002332012.1| predicted protein [Populus trichocarpa] gi|222875237|gb|EEF12368.1|
           predicted protein [Populus trichocarpa]
          Length = 125

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 29/53 (54%), Positives = 37/53 (69%)
 Frame = +3

Query: 333 QPHHPKLKRQSTKVKAKPMKIVYISNPMMFKANNCMEFRQIVQELTGQYSNID 491
           Q   PK  ++STK K +P+KI YIS+P M KA N  EFR IVQELTG+ S ++
Sbjct: 11  QQEQPKKGQKSTKNKREPIKIKYISSPTMVKATNATEFRAIVQELTGKDSKVE 63


>ref|XP_002332009.1| predicted protein [Populus trichocarpa] gi|222875234|gb|EEF12365.1|
           predicted protein [Populus trichocarpa]
          Length = 126

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 29/53 (54%), Positives = 37/53 (69%)
 Frame = +3

Query: 333 QPHHPKLKRQSTKVKAKPMKIVYISNPMMFKANNCMEFRQIVQELTGQYSNID 491
           Q   PK  ++STK K +P+KI YIS+P M KA N  EFR IVQELTG+ S ++
Sbjct: 11  QQEQPKKGQKSTKNKREPIKIKYISSPTMVKATNATEFRAIVQELTGKDSKVE 63


>ref|XP_002522185.1| conserved hypothetical protein [Ricinus communis]
           gi|223538623|gb|EEF40226.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 146

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 28/51 (54%), Positives = 36/51 (70%)
 Frame = +3

Query: 348 KLKRQSTKVKAKPMKIVYISNPMMFKANNCMEFRQIVQELTGQYSNIDSIP 500
           K  R++   K +PMK+VYISNPM FK  +  EFR +VQELTGQYS + + P
Sbjct: 7   KSSRKAKPKKKQPMKVVYISNPMKFKI-SASEFRALVQELTGQYSELPADP 56


>ref|XP_002326773.1| predicted protein [Populus trichocarpa] gi|222834095|gb|EEE72572.1|
           predicted protein [Populus trichocarpa]
          Length = 105

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 26/49 (53%), Positives = 35/49 (71%)
 Frame = +3

Query: 345 PKLKRQSTKVKAKPMKIVYISNPMMFKANNCMEFRQIVQELTGQYSNID 491
           P+  +  TK + +P+KI YIS+PMM KA N  EFR IVQELTG+ S ++
Sbjct: 14  PRRGKNPTKHRKEPVKITYISSPMMVKATNASEFRVIVQELTGKDSKVE 62


>ref|XP_002331999.1| predicted protein [Populus trichocarpa] gi|222874767|gb|EEF11898.1|
           predicted protein [Populus trichocarpa]
          Length = 166

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/49 (53%), Positives = 35/49 (71%)
 Frame = +3

Query: 345 PKLKRQSTKVKAKPMKIVYISNPMMFKANNCMEFRQIVQELTGQYSNID 491
           P+  ++ TK K +P+KI YIS+P M KA N  EFR IVQELTG+ S ++
Sbjct: 14  PRRGKKPTKHKKEPVKITYISSPTMVKATNASEFRAIVQELTGKDSKVE 62


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