BLASTX nr result
ID: Coptis25_contig00028273
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00028273 (240 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AEO86797.1| cyclin [Camellia sinensis] 115 4e-24 emb|CBI37831.3| unnamed protein product [Vitis vinifera] 112 2e-23 ref|XP_002278139.1| PREDICTED: G2/mitotic-specific cyclin-1-like... 112 2e-23 gb|ACI89426.1| cyclin B [Populus tomentosa] 112 3e-23 ref|XP_002307791.1| predicted protein [Populus trichocarpa] gi|2... 111 7e-23 >gb|AEO86797.1| cyclin [Camellia sinensis] Length = 439 Score = 115 bits (288), Expect = 4e-24 Identities = 55/79 (69%), Positives = 60/79 (75%) Frame = +3 Query: 3 IDCGDSENPLAVVEYVEDIYXXXXXXXXXXXXXPNYMAQQYDINERMRAILIDWLIEVHY 182 ID D NPLAVVEY++DIY PNY+ QQ+DINERMR ILIDWLIEVHY Sbjct: 169 IDTSDKRNPLAVVEYIDDIYAYYKKVESSSCVLPNYIGQQFDINERMRGILIDWLIEVHY 228 Query: 183 KFELMDETLFLTVNLIDRF 239 KFELMDETL+LTVNLIDRF Sbjct: 229 KFELMDETLYLTVNLIDRF 247 >emb|CBI37831.3| unnamed protein product [Vitis vinifera] Length = 424 Score = 112 bits (281), Expect = 2e-23 Identities = 55/79 (69%), Positives = 61/79 (77%) Frame = +3 Query: 3 IDCGDSENPLAVVEYVEDIYXXXXXXXXXXXXXPNYMAQQYDINERMRAILIDWLIEVHY 182 ID D ENPLAVVEY++DIY P YM+ Q+DIN++MRAILIDWLIEVHY Sbjct: 158 IDGSDIENPLAVVEYIDDIYHFYRKTESLSCVSPTYMSFQFDINQKMRAILIDWLIEVHY 217 Query: 183 KFELMDETLFLTVNLIDRF 239 KFELMDETLFLTVNLIDRF Sbjct: 218 KFELMDETLFLTVNLIDRF 236 >ref|XP_002278139.1| PREDICTED: G2/mitotic-specific cyclin-1-like [Vitis vinifera] Length = 373 Score = 112 bits (281), Expect = 2e-23 Identities = 55/79 (69%), Positives = 61/79 (77%) Frame = +3 Query: 3 IDCGDSENPLAVVEYVEDIYXXXXXXXXXXXXXPNYMAQQYDINERMRAILIDWLIEVHY 182 ID D ENPLAVVEY++DIY P YM+ Q+DIN++MRAILIDWLIEVHY Sbjct: 107 IDGSDIENPLAVVEYIDDIYHFYRKTESLSCVSPTYMSFQFDINQKMRAILIDWLIEVHY 166 Query: 183 KFELMDETLFLTVNLIDRF 239 KFELMDETLFLTVNLIDRF Sbjct: 167 KFELMDETLFLTVNLIDRF 185 >gb|ACI89426.1| cyclin B [Populus tomentosa] Length = 399 Score = 112 bits (280), Expect = 3e-23 Identities = 53/79 (67%), Positives = 61/79 (77%) Frame = +3 Query: 3 IDCGDSENPLAVVEYVEDIYXXXXXXXXXXXXXPNYMAQQYDINERMRAILIDWLIEVHY 182 IDCGD ++ LAVVEY++DIY P YM +Q+DINE+MRAILIDWLIEVHY Sbjct: 131 IDCGDLKDTLAVVEYIDDIYAYYKKTESSGCVSPTYMDRQFDINEKMRAILIDWLIEVHY 190 Query: 183 KFELMDETLFLTVNLIDRF 239 KFELMDETLFL +NLIDRF Sbjct: 191 KFELMDETLFLAINLIDRF 209 >ref|XP_002307791.1| predicted protein [Populus trichocarpa] gi|222857240|gb|EEE94787.1| predicted protein [Populus trichocarpa] Length = 436 Score = 111 bits (277), Expect = 7e-23 Identities = 53/79 (67%), Positives = 61/79 (77%) Frame = +3 Query: 3 IDCGDSENPLAVVEYVEDIYXXXXXXXXXXXXXPNYMAQQYDINERMRAILIDWLIEVHY 182 ID D +PLAVVEY++D+Y PNYMAQQ+DIN+RMR ILIDWLIEVHY Sbjct: 166 IDGCDKRDPLAVVEYIDDLYNFYKKAERSGCVPPNYMAQQFDINDRMRGILIDWLIEVHY 225 Query: 183 KFELMDETLFLTVNLIDRF 239 KFELM+ETL+LTVNLIDRF Sbjct: 226 KFELMEETLYLTVNLIDRF 244