BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028258
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272572.1| PREDICTED: psbB mRNA maturation factor Mbb1,...    60   2e-07
emb|CAN76674.1| hypothetical protein VITISV_011791 [Vitis vinifera]    60   2e-07

>ref|XP_002272572.1| PREDICTED: psbB mRNA maturation factor Mbb1, chloroplastic [Vitis
           vinifera] gi|296083248|emb|CBI22884.3| unnamed protein
           product [Vitis vinifera]
          Length = 651

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 49/138 (35%), Positives = 67/138 (48%), Gaps = 22/138 (15%)
 Frame = -1

Query: 348 LKMQLSKSYIP----LFSPSQN---SKFHFPILLKTLHFTPCTLKTTPYSLRQNSVPALE 190
           LK++LS    P    L+SPSQN   SKF F + +  LH +   L   P + + +S P LE
Sbjct: 3   LKLKLSSPSSPSNFSLYSPSQNPSSSKFSFKVPIVPLHSSLSPLTLPPCASKDSSSPLLE 62

Query: 189 ESEEDK----QVLSSDGLLTVRRPXXXXXXXXXXXXXS-----------VIDASLSKFAK 55
           +         +  S   +LTVRRP                          IDA L++FAK
Sbjct: 63  QKPHSSGFGSEPQSPPEVLTVRRPMKEYSGDDDESSNGDDVDEDTFSSSPIDAGLAEFAK 122

Query: 54  KMPIFEPQERVELSSKEK 1
           K+P+FEPQ R ELSS+E+
Sbjct: 123 KLPMFEPQ-RAELSSEER 139


>emb|CAN76674.1| hypothetical protein VITISV_011791 [Vitis vinifera]
          Length = 629

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 49/138 (35%), Positives = 67/138 (48%), Gaps = 22/138 (15%)
 Frame = -1

Query: 348 LKMQLSKSYIP----LFSPSQN---SKFHFPILLKTLHFTPCTLKTTPYSLRQNSVPALE 190
           LK++LS    P    L+SPSQN   SKF F + +  LH +   L   P + + +S P LE
Sbjct: 3   LKLKLSSPSSPSNFSLYSPSQNPSSSKFSFKVPIVPLHSSLSPLTLPPCASKDSSSPLLE 62

Query: 189 ESEEDK----QVLSSDGLLTVRRPXXXXXXXXXXXXXS-----------VIDASLSKFAK 55
           +         +  S   +LTVRRP                          IDA L++FAK
Sbjct: 63  QKPHSSGFGSEPQSPPEVLTVRRPMKEYSGDDDESSNGDDVDEDTFSSSPIDAGLAEFAK 122

Query: 54  KMPIFEPQERVELSSKEK 1
           K+P+FEPQ R ELSS+E+
Sbjct: 123 KLPMFEPQ-RAELSSEER 139