BLASTX nr result

ID: Coptis25_contig00028246 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028246
         (1954 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281251.1| PREDICTED: uncharacterized protein LOC100242...   673   0.0  
emb|CBI34815.3| unnamed protein product [Vitis vinifera]              672   0.0  
ref|XP_002509632.1| amino acid binding protein, putative [Ricinu...   649   0.0  
ref|XP_002304443.1| predicted protein [Populus trichocarpa] gi|2...   642   0.0  
ref|XP_002329846.1| predicted protein [Populus trichocarpa] gi|2...   637   e-180

>ref|XP_002281251.1| PREDICTED: uncharacterized protein LOC100242743 [Vitis vinifera]
            gi|147794108|emb|CAN62364.1| hypothetical protein
            VITISV_031924 [Vitis vinifera]
          Length = 444

 Score =  673 bits (1736), Expect = 0.0
 Identities = 344/443 (77%), Positives = 388/443 (87%), Gaps = 6/443 (1%)
 Frame = +2

Query: 173  ENMEWASLDEVEKLVIRMNTPRVVIDNAVCATATLVKIDSARKQGFFLEAVQVLTDLNLC 352
            E MEW  LDE EKLVIRMNTPRVV+DNAVCAT TLVK+DSARK G  LEAVQVLTDLNL 
Sbjct: 3    ELMEWPCLDEYEKLVIRMNTPRVVVDNAVCATTTLVKVDSARKHGILLEAVQVLTDLNLS 62

Query: 353  IKKAYISSDGRWFMDVFHVTDEYGNKLTDKSVINYIEQSLGTYNSVRTNGFTGLTALELT 532
            IKKAYISSDGRWFMDVFHVTD  GNKLTD+SVINYIEQSLG  + VR+N F GLTALELT
Sbjct: 63   IKKAYISSDGRWFMDVFHVTDLNGNKLTDESVINYIEQSLGCIHHVRSNSFNGLTALELT 122

Query: 533  GNDRPGLLSEVFAVLADLQCSIVEAKVWTHSGRIASLIFVKDVDSGSPIEDSQKISTIEG 712
            G DR GLLSEVFAVLADL+C++VE+K+WTH+GRIASLI+VKD DSG+PIEDSQKI  IEG
Sbjct: 123  GTDRLGLLSEVFAVLADLECNVVESKMWTHNGRIASLIYVKDCDSGNPIEDSQKIDRIEG 182

Query: 713  RLKNVLKGDNDIRGARTTVAMAVVHTERRLHQMMFADRDYERKP-----NNGTQVTVQNW 877
            RL+NVLKGDNDIR A+T+V++AV HTERRLHQMMFADRDYER+P     +    VTVQNW
Sbjct: 183  RLRNVLKGDNDIRSAKTSVSLAVTHTERRLHQMMFADRDYEREPIIRSASESPAVTVQNW 242

Query: 878  LERGYSILNVECKDRRKLLFDVVCTLTDMQYVVFHATIDSSHNQAYMEFYIRHSDGSPIS 1057
            +ERGYS++NV+CKDRRKLLFDVVCTLTDMQYVVFHATI+++ ++AY+EFYIRH+DGSPIS
Sbjct: 243  VERGYSVVNVQCKDRRKLLFDVVCTLTDMQYVVFHATINTAGDKAYLEFYIRHTDGSPIS 302

Query: 1058 SEAERQRVIQCVQASIERRVTNGVKLELCTSDRQGLLADVTRTFRENGLNVARAEISTTS 1237
            SEAERQRVIQC+QA+IERR + GV+LELCT DR+GLLADVTRTFRENGLNV RAEISTT 
Sbjct: 303  SEAERQRVIQCLQAAIERRASEGVRLELCTEDRRGLLADVTRTFRENGLNVTRAEISTT- 361

Query: 1238 SDMALNVFYVTDAAGNALDAKTIEGVRQRIGLNNLIVKE-PLTVCSKEEDDTQSAGVGGA 1414
            S++ALNVFYVTDA GN  D K IE VRQ+IGL+NL VKE PL    + E D  + GVGGA
Sbjct: 362  SEIALNVFYVTDAMGNPADPKIIEAVRQKIGLSNLKVKELPLINHQEAERDEPTVGVGGA 421

Query: 1415 MLLSLGSLVRRNLYNLGLIRSYS 1483
            +LLSLGSLVRRNLYNLGLIRS+S
Sbjct: 422  VLLSLGSLVRRNLYNLGLIRSHS 444


>emb|CBI34815.3| unnamed protein product [Vitis vinifera]
          Length = 440

 Score =  672 bits (1734), Expect = 0.0
 Identities = 343/441 (77%), Positives = 387/441 (87%), Gaps = 6/441 (1%)
 Frame = +2

Query: 179  MEWASLDEVEKLVIRMNTPRVVIDNAVCATATLVKIDSARKQGFFLEAVQVLTDLNLCIK 358
            MEW  LDE EKLVIRMNTPRVV+DNAVCAT TLVK+DSARK G  LEAVQVLTDLNL IK
Sbjct: 1    MEWPCLDEYEKLVIRMNTPRVVVDNAVCATTTLVKVDSARKHGILLEAVQVLTDLNLSIK 60

Query: 359  KAYISSDGRWFMDVFHVTDEYGNKLTDKSVINYIEQSLGTYNSVRTNGFTGLTALELTGN 538
            KAYISSDGRWFMDVFHVTD  GNKLTD+SVINYIEQSLG  + VR+N F GLTALELTG 
Sbjct: 61   KAYISSDGRWFMDVFHVTDLNGNKLTDESVINYIEQSLGCIHHVRSNSFNGLTALELTGT 120

Query: 539  DRPGLLSEVFAVLADLQCSIVEAKVWTHSGRIASLIFVKDVDSGSPIEDSQKISTIEGRL 718
            DR GLLSEVFAVLADL+C++VE+K+WTH+GRIASLI+VKD DSG+PIEDSQKI  IEGRL
Sbjct: 121  DRLGLLSEVFAVLADLECNVVESKMWTHNGRIASLIYVKDCDSGNPIEDSQKIDRIEGRL 180

Query: 719  KNVLKGDNDIRGARTTVAMAVVHTERRLHQMMFADRDYERKP-----NNGTQVTVQNWLE 883
            +NVLKGDNDIR A+T+V++AV HTERRLHQMMFADRDYER+P     +    VTVQNW+E
Sbjct: 181  RNVLKGDNDIRSAKTSVSLAVTHTERRLHQMMFADRDYEREPIIRSASESPAVTVQNWVE 240

Query: 884  RGYSILNVECKDRRKLLFDVVCTLTDMQYVVFHATIDSSHNQAYMEFYIRHSDGSPISSE 1063
            RGYS++NV+CKDRRKLLFDVVCTLTDMQYVVFHATI+++ ++AY+EFYIRH+DGSPISSE
Sbjct: 241  RGYSVVNVQCKDRRKLLFDVVCTLTDMQYVVFHATINTAGDKAYLEFYIRHTDGSPISSE 300

Query: 1064 AERQRVIQCVQASIERRVTNGVKLELCTSDRQGLLADVTRTFRENGLNVARAEISTTSSD 1243
            AERQRVIQC+QA+IERR + GV+LELCT DR+GLLADVTRTFRENGLNV RAEISTT S+
Sbjct: 301  AERQRVIQCLQAAIERRASEGVRLELCTEDRRGLLADVTRTFRENGLNVTRAEISTT-SE 359

Query: 1244 MALNVFYVTDAAGNALDAKTIEGVRQRIGLNNLIVKE-PLTVCSKEEDDTQSAGVGGAML 1420
            +ALNVFYVTDA GN  D K IE VRQ+IGL+NL VKE PL    + E D  + GVGGA+L
Sbjct: 360  IALNVFYVTDAMGNPADPKIIEAVRQKIGLSNLKVKELPLINHQEAERDEPTVGVGGAVL 419

Query: 1421 LSLGSLVRRNLYNLGLIRSYS 1483
            LSLGSLVRRNLYNLGLIRS+S
Sbjct: 420  LSLGSLVRRNLYNLGLIRSHS 440


>ref|XP_002509632.1| amino acid binding protein, putative [Ricinus communis]
            gi|223549531|gb|EEF51019.1| amino acid binding protein,
            putative [Ricinus communis]
          Length = 442

 Score =  649 bits (1675), Expect = 0.0
 Identities = 336/443 (75%), Positives = 378/443 (85%), Gaps = 8/443 (1%)
 Frame = +2

Query: 179  MEWAS-LDEVEKLVIRMNTPRVVIDNAVCATATLVKIDSARKQGFFLEAVQVLTDLNLCI 355
            MEW++ LDE EKLVIRM TPRVVIDN VC TAT+VK+DSARK G  LEAVQVLTDLNL I
Sbjct: 1    MEWSAYLDEYEKLVIRMTTPRVVIDNGVCPTATVVKVDSARKHGILLEAVQVLTDLNLSI 60

Query: 356  KKAYISSDGRWFMDVFHVTDEYGNKLTDKSVINYIEQSLGTYNSVRTNGFTGLTALELTG 535
            KKAYISSDGRWFMDVFHVTD  GNKLTD+SVINYIEQSLGT +  RT+ F GLTALELTG
Sbjct: 61   KKAYISSDGRWFMDVFHVTDINGNKLTDESVINYIEQSLGTIHYGRTHDFNGLTALELTG 120

Query: 536  NDRPGLLSEVFAVLADLQCSIVEAKVWTHSGRIASLIFVKDVDSGSPIEDSQKISTIEGR 715
             DR GLLSEVFAVLADLQC +VEAKVWTH+GRIASLI+VKD +SGSPIEDSQ I  IE R
Sbjct: 121  TDRVGLLSEVFAVLADLQCDVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQHIDRIEAR 180

Query: 716  LKNVLKGDNDIRGARTTVAMAVVHTERRLHQMMFADRDYERKP-----NNGTQVTVQNWL 880
            L+NVLKGDNDIR A+T+V+MAV HTERRLHQMMFADRDYERKP      +   VTVQNW+
Sbjct: 181  LRNVLKGDNDIRSAKTSVSMAVTHTERRLHQMMFADRDYERKPILRFSADSPVVTVQNWV 240

Query: 881  ERGYSILNVECKDRRKLLFDVVCTLTDMQYVVFHATIDSSHNQAYMEFYIRHSDGSPISS 1060
            ERGYS++NV+CKDR KLLFDVVCTLTDM+YVVFHATI+++ ++AY+EFYI+H+DG+PISS
Sbjct: 241  ERGYSVVNVQCKDRMKLLFDVVCTLTDMEYVVFHATINTAGDKAYLEFYIKHTDGTPISS 300

Query: 1061 EAERQRVIQCVQASIERRVTNGVKLELCTSDRQGLLADVTRTFRENGLNVARAEISTTSS 1240
            E ERQRVIQC+QA++ERR + GV+LELCT DRQGLLADVTRTFRENGLNV RAEIS TS+
Sbjct: 301  EPERQRVIQCLQAAVERRASEGVRLELCTPDRQGLLADVTRTFRENGLNVTRAEIS-TST 359

Query: 1241 DMALNVFYVTDAAGNALDAKTIEGVRQRIGLNNLIVKE--PLTVCSKEEDDTQSAGVGGA 1414
              A NVFYVTDA GN  D+K IE VRQRIGL+NL VKE  PL    + E + Q  GV G 
Sbjct: 360  KTATNVFYVTDAIGNPADSKIIESVRQRIGLSNLKVKELPPLMYHQEAEREEQGVGVAGT 419

Query: 1415 MLLSLGSLVRRNLYNLGLIRSYS 1483
            +LLSLGSLVR+NLYNLGLIRSYS
Sbjct: 420  VLLSLGSLVRKNLYNLGLIRSYS 442


>ref|XP_002304443.1| predicted protein [Populus trichocarpa] gi|222841875|gb|EEE79422.1|
            predicted protein [Populus trichocarpa]
          Length = 442

 Score =  642 bits (1655), Expect = 0.0
 Identities = 333/443 (75%), Positives = 377/443 (85%), Gaps = 8/443 (1%)
 Frame = +2

Query: 179  MEW-ASLDEVEKLVIRMNTPRVVIDNAVCATATLVKIDSARKQGFFLEAVQVLTDLNLCI 355
            MEW A LDE EKLVIRM TPRVVIDNAVC  AT+VK+DSARK G  LEAVQVLTDLNL I
Sbjct: 1    MEWSACLDEYEKLVIRMTTPRVVIDNAVCPKATVVKVDSARKHGILLEAVQVLTDLNLSI 60

Query: 356  KKAYISSDGRWFMDVFHVTDEYGNKLTDKSVINYIEQSLGTYNSVRTNGFTGLTALELTG 535
            KKAYISSDGRWFMDVFHVTD  GNKLTDKSVINYIEQSL T +  R  G  GLTALELTG
Sbjct: 61   KKAYISSDGRWFMDVFHVTDLNGNKLTDKSVINYIEQSLVTIHYGRKTGSNGLTALELTG 120

Query: 536  NDRPGLLSEVFAVLADLQCSIVEAKVWTHSGRIASLIFVKDVDSGSPIEDSQKISTIEGR 715
             DR GLLSEVFAVLADLQC++V+AKVWTH+GRIA+L+FVKD +SGSPIED+Q+I  IE R
Sbjct: 121  TDRVGLLSEVFAVLADLQCNVVDAKVWTHNGRIAALMFVKDCNSGSPIEDTQQIDRIEAR 180

Query: 716  LKNVLKGDNDIRGARTTVAMAVVHTERRLHQMMFADRDYERKP-----NNGTQVTVQNWL 880
            L+NVLKGDNDIR A+T V+MAV HTERRLHQMMFADRDYER P      +   VTVQNW+
Sbjct: 181  LRNVLKGDNDIRSAKTMVSMAVTHTERRLHQMMFADRDYERNPILQPSGDSPVVTVQNWV 240

Query: 881  ERGYSILNVECKDRRKLLFDVVCTLTDMQYVVFHATIDSSHNQAYMEFYIRHSDGSPISS 1060
            ERGYS++NV+C+DR KLLFDVVCTLTDM+Y+VFHATI +S ++AY+EFYIRH+DG+PISS
Sbjct: 241  ERGYSVVNVQCRDRTKLLFDVVCTLTDMEYIVFHATIKTSGDRAYLEFYIRHTDGTPISS 300

Query: 1061 EAERQRVIQCVQASIERRVTNGVKLELCTSDRQGLLADVTRTFRENGLNVARAEISTTSS 1240
            E ERQRVIQC+QA++ERRV+ GV+LELCT DRQ LLADVTRTFRENGLNV RAEISTT  
Sbjct: 301  EPERQRVIQCLQAAVERRVSEGVRLELCTLDRQCLLADVTRTFRENGLNVTRAEISTT-R 359

Query: 1241 DMALNVFYVTDAAGNALDAKTIEGVRQRIGLNNLIVKE--PLTVCSKEEDDTQSAGVGGA 1414
            DMALNVFYVTDA GNA D K IE VRQ+IG+++L VKE  PL    + E + Q+AGV G 
Sbjct: 360  DMALNVFYVTDAIGNAADPKLIESVRQKIGMSSLKVKELPPLVYHQEAEREDQTAGVAGT 419

Query: 1415 MLLSLGSLVRRNLYNLGLIRSYS 1483
            +LLSLGSLV+RNLY+LGLIRSYS
Sbjct: 420  VLLSLGSLVKRNLYHLGLIRSYS 442


>ref|XP_002329846.1| predicted protein [Populus trichocarpa] gi|222871083|gb|EEF08214.1|
            predicted protein [Populus trichocarpa]
          Length = 442

 Score =  637 bits (1644), Expect = e-180
 Identities = 328/443 (74%), Positives = 378/443 (85%), Gaps = 8/443 (1%)
 Frame = +2

Query: 179  MEWASL-DEVEKLVIRMNTPRVVIDNAVCATATLVKIDSARKQGFFLEAVQVLTDLNLCI 355
            MEW++  DE EKLVIRM TPRVVIDNAV + AT+VK+DSARK    LEAVQVLTDLNL I
Sbjct: 1    MEWSACSDEYEKLVIRMTTPRVVIDNAVSSKATVVKVDSARKHRILLEAVQVLTDLNLSI 60

Query: 356  KKAYISSDGRWFMDVFHVTDEYGNKLTDKSVINYIEQSLGTYNSVRTNGFTGLTALELTG 535
            KKAYISSDGRWFMDVFHVTD  GNKLTD+SVINYIEQSLGT +  +T G  GLTALELTG
Sbjct: 61   KKAYISSDGRWFMDVFHVTDLNGNKLTDESVINYIEQSLGTIHPGKTTGSNGLTALELTG 120

Query: 536  NDRPGLLSEVFAVLADLQCSIVEAKVWTHSGRIASLIFVKDVDSGSPIEDSQKISTIEGR 715
             DR GLLSEVFAVLADLQCS+V+AKVWTH+GRIASL++VKD +SGSPIED+Q I  IE R
Sbjct: 121  TDRIGLLSEVFAVLADLQCSVVDAKVWTHNGRIASLMYVKDCNSGSPIEDTQHIDRIEAR 180

Query: 716  LKNVLKGDNDIRGARTTVAMAVVHTERRLHQMMFADRDYERKP-----NNGTQVTVQNWL 880
            L+NVLKGDNDIR A+T V+MAV HTERRLHQ+MFADRDYERKP      +   VTVQNW+
Sbjct: 181  LRNVLKGDNDIRSAKTMVSMAVTHTERRLHQVMFADRDYERKPILQPSGDSPVVTVQNWV 240

Query: 881  ERGYSILNVECKDRRKLLFDVVCTLTDMQYVVFHATIDSSHNQAYMEFYIRHSDGSPISS 1060
            ERGYS++NV+CKDR KLLFDVVCTLTDM+Y+VFHATI+++ ++AY+EFYIRH+DG+PISS
Sbjct: 241  ERGYSVVNVQCKDRTKLLFDVVCTLTDMEYIVFHATINTAGDRAYLEFYIRHTDGTPISS 300

Query: 1061 EAERQRVIQCVQASIERRVTNGVKLELCTSDRQGLLADVTRTFRENGLNVARAEISTTSS 1240
            E ERQRVIQC+QA++ERR + GV+LELCT DRQGLLADVTRTFRENGLNV RAEIS T+ 
Sbjct: 301  EPERQRVIQCLQAAVERRASEGVRLELCTPDRQGLLADVTRTFRENGLNVTRAEIS-TAG 359

Query: 1241 DMALNVFYVTDAAGNALDAKTIEGVRQRIGLNNLIVKE--PLTVCSKEEDDTQSAGVGGA 1414
            DMALNVFYVTDA GN  D K IE VRQ+IG++NL VKE  PL    + E + Q+AGV G 
Sbjct: 360  DMALNVFYVTDAVGNPADPKLIESVRQKIGVSNLKVKELPPLIYHQEAEREDQTAGVAGT 419

Query: 1415 MLLSLGSLVRRNLYNLGLIRSYS 1483
            +LLSLGSLV++NLY+LGLIRSYS
Sbjct: 420  VLLSLGSLVKKNLYHLGLIRSYS 442


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