BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028241
         (424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...   145   3e-33
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...   144   7e-33
gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]             142   4e-32
gb|EEC76774.1| hypothetical protein OsI_14862 [Oryza sativa Indi...   142   4e-32
gb|EAZ29765.1| hypothetical protein OsJ_13823 [Oryza sativa Japo...   142   4e-32

>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1374

 Score =  145 bits (366), Expect = 3e-33
 Identities = 67/141 (47%), Positives = 100/141 (70%)
 Frame = -2

Query: 423  LGFSQKWRSLIKQCISTVSFQVLLNGTPLNKILPERGLRQGDPLSPYLFIIMSEALSRMI 244
            LGF+  W  LI +C+ +V +QVL+NGTP  +I+P RGLRQGDPLSPYLF+I +E L +M+
Sbjct: 596  LGFADHWIRLIMECVKSVRYQVLINGTPHGEIIPSRGLRQGDPLSPYLFVICTEMLVKML 655

Query: 243  AKAEAEEKVHGIKIRRASPPISHLLYADDLILFTRGNLEDGGHLKDILQAYCAASGQQIN 64
              AE + ++ G+K+ R +PPISHLL+ADD + + + N E  G +  I++ Y  ASGQ++N
Sbjct: 656  QSAEQKNQITGLKVARGAPPISHLLFADDSMFYCKVNDEALGQIIRIIEEYSLASGQRVN 715

Query: 63   FDKSSIFFSRNIKFRNKIKLK 1
            + KSSI+F ++I    +  +K
Sbjct: 716  YLKSSIYFGKHISEERRCLVK 736


>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score =  144 bits (363), Expect = 7e-33
 Identities = 72/141 (51%), Positives = 95/141 (67%)
 Frame = -2

Query: 423 LGFSQKWRSLIKQCISTVSFQVLLNGTPLNKILPERGLRQGDPLSPYLFIIMSEALSRMI 244
           +GF +KW S I  CI+TV ++VL+NG P   I+PERGLRQGDPLSPYLFI+ +E L   I
Sbjct: 380 MGFCEKWISWIMWCITTVQYKVLINGQPKGLIIPERGLRQGDPLSPYLFILCTEVLIANI 439

Query: 243 AKAEAEEKVHGIKIRRASPPISHLLYADDLILFTRGNLEDGGHLKDILQAYCAASGQQIN 64
            KAE +  + GIK+   SP +SHLL+ADD + F + N E  G + +IL+ Y + SGQQIN
Sbjct: 440 RKAERQNLITGIKVATPSPAVSHLLFADDSLFFCKANKEQCGIILEILKQYESVSGQQIN 499

Query: 63  FDKSSIFFSRNIKFRNKIKLK 1
           F KSSI F   ++   K  +K
Sbjct: 500 FSKSSIQFGHKVEDSIKADIK 520


>gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]
          Length = 1023

 Score =  142 bits (357), Expect = 4e-32
 Identities = 73/141 (51%), Positives = 95/141 (67%)
 Frame = -2

Query: 423 LGFSQKWRSLIKQCISTVSFQVLLNGTPLNKILPERGLRQGDPLSPYLFIIMSEALSRMI 244
           +GF +KW S I  CI+TV ++VLLNG P   I+P+RGLRQGDPLSPYLFI+ +E L   I
Sbjct: 446 MGFCEKWISWIMWCITTVQYRVLLNGQPRGLIVPKRGLRQGDPLSPYLFILCTEVLIANI 505

Query: 243 AKAEAEEKVHGIKIRRASPPISHLLYADDLILFTRGNLEDGGHLKDILQAYCAASGQQIN 64
            KAE E+ + GIK+  ASP +SHLL+A+D + F + N E  G +  IL+ Y A SGQ IN
Sbjct: 506 RKAEQEKLITGIKVATASPSVSHLLFANDSLFFCKANKEQCGVILGILKQYEAVSGQMIN 565

Query: 63  FDKSSIFFSRNIKFRNKIKLK 1
           F KSSI F   +    K ++K
Sbjct: 566 FSKSSIQFGHKVGDDIKAEIK 586


>gb|EEC76774.1| hypothetical protein OsI_14862 [Oryza sativa Indica Group]
          Length = 1860

 Score =  142 bits (357), Expect = 4e-32
 Identities = 69/141 (48%), Positives = 93/141 (65%), Gaps = 2/141 (1%)
 Frame = -2

Query: 423  LGFSQKWRSLIKQCISTVSFQVLLNGTPLNKILPERGLRQGDPLSPYLFIIMSEALSRMI 244
            LGF+  W   + +C+++V + V +NG   N + P RGLRQGDP+SPYLF++ +E LS ++
Sbjct: 1370 LGFADPWIQTVMRCVTSVRYAVRINGELTNPVTPSRGLRQGDPISPYLFLLCTEGLSSIL 1429

Query: 243  AKAEAEEKVHGIKIRRASPPISHLLYADDLILFTRGNLEDGGHLKDILQAYCAASGQQIN 64
             K E+   + GI+  R  PPISHLL+ADD I F R +L     LKD LQAYC ASGQ+IN
Sbjct: 1430 QKKESMGVIQGIRNGRLGPPISHLLFADDSIFFARSDLHSVQGLKDALQAYCKASGQKIN 1489

Query: 63   FDKSSIFFSRNI--KFRNKIK 7
              KSSIFF +N     +N +K
Sbjct: 1490 LQKSSIFFGQNCPEDIKNSVK 1510


>gb|EAZ29765.1| hypothetical protein OsJ_13823 [Oryza sativa Japonica Group]
          Length = 490

 Score =  142 bits (357), Expect = 4e-32
 Identities = 69/141 (48%), Positives = 93/141 (65%), Gaps = 2/141 (1%)
 Frame = -2

Query: 423 LGFSQKWRSLIKQCISTVSFQVLLNGTPLNKILPERGLRQGDPLSPYLFIIMSEALSRMI 244
           LGF+  W   + +C+++V + V +NG   N + P RGLRQGDP+SPYLF++ +E LS ++
Sbjct: 83  LGFADPWIQTVMRCVTSVRYAVRINGELTNPVTPSRGLRQGDPISPYLFLLCTEGLSSIL 142

Query: 243 AKAEAEEKVHGIKIRRASPPISHLLYADDLILFTRGNLEDGGHLKDILQAYCAASGQQIN 64
            K E+   + GI+  R  PPISHLL+ADD I F R +L     LKD LQAYC ASGQ+IN
Sbjct: 143 QKKESMGVIQGIRNGRLGPPISHLLFADDSIFFARSDLHSVQGLKDALQAYCKASGQKIN 202

Query: 63  FDKSSIFFSRNI--KFRNKIK 7
             KSSIFF +N     +N +K
Sbjct: 203 LQKSSIFFGQNCLEDIKNSVK 223