BLASTX nr result
ID: Coptis25_contig00028241
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00028241 (424 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAB82639.1| putative non-LTR retroelement reverse transcripta... 145 3e-33 gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-... 144 7e-33 gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana] 142 4e-32 gb|EEC76774.1| hypothetical protein OsI_14862 [Oryza sativa Indi... 142 4e-32 gb|EAZ29765.1| hypothetical protein OsJ_13823 [Oryza sativa Japo... 142 4e-32 >gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] Length = 1374 Score = 145 bits (366), Expect = 3e-33 Identities = 67/141 (47%), Positives = 100/141 (70%) Frame = -2 Query: 423 LGFSQKWRSLIKQCISTVSFQVLLNGTPLNKILPERGLRQGDPLSPYLFIIMSEALSRMI 244 LGF+ W LI +C+ +V +QVL+NGTP +I+P RGLRQGDPLSPYLF+I +E L +M+ Sbjct: 596 LGFADHWIRLIMECVKSVRYQVLINGTPHGEIIPSRGLRQGDPLSPYLFVICTEMLVKML 655 Query: 243 AKAEAEEKVHGIKIRRASPPISHLLYADDLILFTRGNLEDGGHLKDILQAYCAASGQQIN 64 AE + ++ G+K+ R +PPISHLL+ADD + + + N E G + I++ Y ASGQ++N Sbjct: 656 QSAEQKNQITGLKVARGAPPISHLLFADDSMFYCKVNDEALGQIIRIIEEYSLASGQRVN 715 Query: 63 FDKSSIFFSRNIKFRNKIKLK 1 + KSSI+F ++I + +K Sbjct: 716 YLKSSIYFGKHISEERRCLVK 736 >gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana] Length = 1142 Score = 144 bits (363), Expect = 7e-33 Identities = 72/141 (51%), Positives = 95/141 (67%) Frame = -2 Query: 423 LGFSQKWRSLIKQCISTVSFQVLLNGTPLNKILPERGLRQGDPLSPYLFIIMSEALSRMI 244 +GF +KW S I CI+TV ++VL+NG P I+PERGLRQGDPLSPYLFI+ +E L I Sbjct: 380 MGFCEKWISWIMWCITTVQYKVLINGQPKGLIIPERGLRQGDPLSPYLFILCTEVLIANI 439 Query: 243 AKAEAEEKVHGIKIRRASPPISHLLYADDLILFTRGNLEDGGHLKDILQAYCAASGQQIN 64 KAE + + GIK+ SP +SHLL+ADD + F + N E G + +IL+ Y + SGQQIN Sbjct: 440 RKAERQNLITGIKVATPSPAVSHLLFADDSLFFCKANKEQCGIILEILKQYESVSGQQIN 499 Query: 63 FDKSSIFFSRNIKFRNKIKLK 1 F KSSI F ++ K +K Sbjct: 500 FSKSSIQFGHKVEDSIKADIK 520 >gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana] Length = 1023 Score = 142 bits (357), Expect = 4e-32 Identities = 73/141 (51%), Positives = 95/141 (67%) Frame = -2 Query: 423 LGFSQKWRSLIKQCISTVSFQVLLNGTPLNKILPERGLRQGDPLSPYLFIIMSEALSRMI 244 +GF +KW S I CI+TV ++VLLNG P I+P+RGLRQGDPLSPYLFI+ +E L I Sbjct: 446 MGFCEKWISWIMWCITTVQYRVLLNGQPRGLIVPKRGLRQGDPLSPYLFILCTEVLIANI 505 Query: 243 AKAEAEEKVHGIKIRRASPPISHLLYADDLILFTRGNLEDGGHLKDILQAYCAASGQQIN 64 KAE E+ + GIK+ ASP +SHLL+A+D + F + N E G + IL+ Y A SGQ IN Sbjct: 506 RKAEQEKLITGIKVATASPSVSHLLFANDSLFFCKANKEQCGVILGILKQYEAVSGQMIN 565 Query: 63 FDKSSIFFSRNIKFRNKIKLK 1 F KSSI F + K ++K Sbjct: 566 FSKSSIQFGHKVGDDIKAEIK 586 >gb|EEC76774.1| hypothetical protein OsI_14862 [Oryza sativa Indica Group] Length = 1860 Score = 142 bits (357), Expect = 4e-32 Identities = 69/141 (48%), Positives = 93/141 (65%), Gaps = 2/141 (1%) Frame = -2 Query: 423 LGFSQKWRSLIKQCISTVSFQVLLNGTPLNKILPERGLRQGDPLSPYLFIIMSEALSRMI 244 LGF+ W + +C+++V + V +NG N + P RGLRQGDP+SPYLF++ +E LS ++ Sbjct: 1370 LGFADPWIQTVMRCVTSVRYAVRINGELTNPVTPSRGLRQGDPISPYLFLLCTEGLSSIL 1429 Query: 243 AKAEAEEKVHGIKIRRASPPISHLLYADDLILFTRGNLEDGGHLKDILQAYCAASGQQIN 64 K E+ + GI+ R PPISHLL+ADD I F R +L LKD LQAYC ASGQ+IN Sbjct: 1430 QKKESMGVIQGIRNGRLGPPISHLLFADDSIFFARSDLHSVQGLKDALQAYCKASGQKIN 1489 Query: 63 FDKSSIFFSRNI--KFRNKIK 7 KSSIFF +N +N +K Sbjct: 1490 LQKSSIFFGQNCPEDIKNSVK 1510 >gb|EAZ29765.1| hypothetical protein OsJ_13823 [Oryza sativa Japonica Group] Length = 490 Score = 142 bits (357), Expect = 4e-32 Identities = 69/141 (48%), Positives = 93/141 (65%), Gaps = 2/141 (1%) Frame = -2 Query: 423 LGFSQKWRSLIKQCISTVSFQVLLNGTPLNKILPERGLRQGDPLSPYLFIIMSEALSRMI 244 LGF+ W + +C+++V + V +NG N + P RGLRQGDP+SPYLF++ +E LS ++ Sbjct: 83 LGFADPWIQTVMRCVTSVRYAVRINGELTNPVTPSRGLRQGDPISPYLFLLCTEGLSSIL 142 Query: 243 AKAEAEEKVHGIKIRRASPPISHLLYADDLILFTRGNLEDGGHLKDILQAYCAASGQQIN 64 K E+ + GI+ R PPISHLL+ADD I F R +L LKD LQAYC ASGQ+IN Sbjct: 143 QKKESMGVIQGIRNGRLGPPISHLLFADDSIFFARSDLHSVQGLKDALQAYCKASGQKIN 202 Query: 63 FDKSSIFFSRNI--KFRNKIK 7 KSSIFF +N +N +K Sbjct: 203 LQKSSIFFGQNCLEDIKNSVK 223