BLASTX nr result

ID: Coptis25_contig00028232 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028232
         (529 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517343.1| PREDICTED: receptor-like cytosolic serine/th...   161   6e-38
gb|ACU18166.1| unknown [Glycine max]                                  161   6e-38
ref|XP_002310307.1| predicted protein [Populus trichocarpa] gi|2...   160   8e-38
ref|XP_003635543.1| PREDICTED: receptor-like cytosolic serine/th...   160   1e-37
emb|CBI33279.3| unnamed protein product [Vitis vinifera]              160   1e-37

>ref|XP_003517343.1| PREDICTED: receptor-like cytosolic serine/threonine-protein kinase
           RBK1-like [Glycine max]
          Length = 452

 Score =  161 bits (407), Expect = 6e-38
 Identities = 86/162 (53%), Positives = 112/162 (69%), Gaps = 1/162 (0%)
 Frame = -3

Query: 527 EKTDVFAFGVLLLELITGRRAVDSN-RLSLVLWAKPLLETSDMKELVDPRLGDAYNLVEI 351
           EKTDVFAFGVLLLELITG RAVDSN R SLV+WAKPLL+T+++K+L DPRLG+ Y+L E+
Sbjct: 318 EKTDVFAFGVLLLELITGHRAVDSNSRQSLVIWAKPLLDTNNVKDLADPRLGEEYDLTEM 377

Query: 350 KNVTSTASMCIHHXXXXXXXXXXXXXXXXXXXXXXXXSTRRPHMSLVLQLLRGNENESPE 171
           K    TASMC+HH                        S++RP+M+ V+ LL+G E     
Sbjct: 378 KRTMLTASMCVHH-----------------------ASSKRPYMNQVVLLLKGEET---- 410

Query: 170 VMRREQKLHVGRALLLDACDLEDYTCSSYLNDLSRHRQLALE 45
           ++  ++ L   ++L+L+ACDLEDYTCSSYL DL+RHRQL +E
Sbjct: 411 IIEPKKNLVAQKSLMLEACDLEDYTCSSYLKDLNRHRQLIME 452


>gb|ACU18166.1| unknown [Glycine max]
          Length = 141

 Score =  161 bits (407), Expect = 6e-38
 Identities = 86/162 (53%), Positives = 112/162 (69%), Gaps = 1/162 (0%)
 Frame = -3

Query: 527 EKTDVFAFGVLLLELITGRRAVDSN-RLSLVLWAKPLLETSDMKELVDPRLGDAYNLVEI 351
           EKTDVFAFGVLLLELITG RAVDSN R SLV+WAKPLL+T+++K+L DPRLG+ Y+L E+
Sbjct: 7   EKTDVFAFGVLLLELITGHRAVDSNSRQSLVIWAKPLLDTNNVKDLADPRLGEEYDLTEM 66

Query: 350 KNVTSTASMCIHHXXXXXXXXXXXXXXXXXXXXXXXXSTRRPHMSLVLQLLRGNENESPE 171
           K    TASMC+HH                        S++RP+M+ V+ LL+G E     
Sbjct: 67  KRTMLTASMCVHH-----------------------ASSKRPYMNQVVLLLKGEET---- 99

Query: 170 VMRREQKLHVGRALLLDACDLEDYTCSSYLNDLSRHRQLALE 45
           ++  ++ L   ++L+L+ACDLEDYTCSSYL DL+RHRQL +E
Sbjct: 100 IIEPKKNLVAQKSLMLEACDLEDYTCSSYLKDLNRHRQLIME 141


>ref|XP_002310307.1| predicted protein [Populus trichocarpa] gi|222853210|gb|EEE90757.1|
           predicted protein [Populus trichocarpa]
          Length = 421

 Score =  160 bits (406), Expect = 8e-38
 Identities = 88/161 (54%), Positives = 107/161 (66%)
 Frame = -3

Query: 527 EKTDVFAFGVLLLELITGRRAVDSNRLSLVLWAKPLLETSDMKELVDPRLGDAYNLVEIK 348
           EKTDVFA+GVLLLE+ITGRRAVDS+R SLV+WAKPLLE ++ KEL DPRLGD Y+ +E+K
Sbjct: 288 EKTDVFAYGVLLLEIITGRRAVDSSRQSLVMWAKPLLEANNAKELADPRLGDDYDPIEMK 347

Query: 347 NVTSTASMCIHHXXXXXXXXXXXXXXXXXXXXXXXXSTRRPHMSLVLQLLRGNENESPEV 168
           +   TA MCIHH                           RPHM  V+QLLRG E    E 
Sbjct: 348 HAMFTALMCIHH-----------------------LPNTRPHMIRVVQLLRG-EGAPVEF 383

Query: 167 MRREQKLHVGRALLLDACDLEDYTCSSYLNDLSRHRQLALE 45
              +QK + GRA+LLD CDL+DYTC++YL DL+RH QL +E
Sbjct: 384 ---KQKTNAGRAVLLDGCDLQDYTCTTYLKDLNRHMQLVME 421


>ref|XP_003635543.1| PREDICTED: receptor-like cytosolic serine/threonine-protein kinase
           RBK1-like, partial [Vitis vinifera]
          Length = 309

 Score =  160 bits (405), Expect = 1e-37
 Identities = 92/161 (57%), Positives = 109/161 (67%)
 Frame = -3

Query: 527 EKTDVFAFGVLLLELITGRRAVDSNRLSLVLWAKPLLETSDMKELVDPRLGDAYNLVEIK 348
           EKTDVFAFGVLLLELITGR AVDS+R SLV+WAKPLL+ +D+KEL D RLGD Y+L E+K
Sbjct: 176 EKTDVFAFGVLLLELITGRHAVDSSRQSLVIWAKPLLDANDVKELADSRLGDCYDLGEMK 235

Query: 347 NVTSTASMCIHHXXXXXXXXXXXXXXXXXXXXXXXXSTRRPHMSLVLQLLRGNENESPEV 168
               TASMCIHH                        S+ RP M+ V+QLLRG E +SPE 
Sbjct: 236 RAMLTASMCIHH-----------------------SSSMRPEMNRVVQLLRG-EGKSPE- 270

Query: 167 MRREQKLHVGRALLLDACDLEDYTCSSYLNDLSRHRQLALE 45
              +QK +VGRAL+LD  DL DYT +SYL DL+RH +L LE
Sbjct: 271 --PKQKSNVGRALILDDSDLADYTPTSYLRDLNRHMELVLE 309


>emb|CBI33279.3| unnamed protein product [Vitis vinifera]
          Length = 310

 Score =  160 bits (405), Expect = 1e-37
 Identities = 92/161 (57%), Positives = 109/161 (67%)
 Frame = -3

Query: 527 EKTDVFAFGVLLLELITGRRAVDSNRLSLVLWAKPLLETSDMKELVDPRLGDAYNLVEIK 348
           EKTDVFAFGVLLLELITGR AVDS+R SLV+WAKPLL+ +D+KEL D RLGD Y+L E+K
Sbjct: 177 EKTDVFAFGVLLLELITGRHAVDSSRQSLVIWAKPLLDANDVKELADSRLGDCYDLGEMK 236

Query: 347 NVTSTASMCIHHXXXXXXXXXXXXXXXXXXXXXXXXSTRRPHMSLVLQLLRGNENESPEV 168
               TASMCIHH                        S+ RP M+ V+QLLRG E +SPE 
Sbjct: 237 RAMLTASMCIHH-----------------------SSSMRPEMNRVVQLLRG-EGKSPE- 271

Query: 167 MRREQKLHVGRALLLDACDLEDYTCSSYLNDLSRHRQLALE 45
              +QK +VGRAL+LD  DL DYT +SYL DL+RH +L LE
Sbjct: 272 --PKQKSNVGRALILDDSDLADYTPTSYLRDLNRHMELVLE 310


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