BLASTX nr result

ID: Coptis25_contig00028225 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028225
         (904 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284582.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...   330   4e-88
ref|XP_002284638.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...   328   1e-87
ref|XP_002284642.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...   327   3e-87
gb|AFK38498.1| unknown [Lotus japonicus]                              325   9e-87
ref|XP_003632012.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...   321   1e-85

>ref|XP_002284582.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1
           [Vitis vinifera]
          Length = 364

 Score =  330 bits (845), Expect = 4e-88
 Identities = 152/298 (51%), Positives = 213/298 (71%)
 Frame = -1

Query: 895 THFQIPIIDLQGIKDDKGMQQVIVKEILSASEKWGFFLVVNHGVPSSVMEGMIKGVAKFH 716
           T F+ P+IDLQG+  D+  ++ IV ++  ASE WGFF V+NHG+P +V+E M+ GV +F+
Sbjct: 57  TQFKFPVIDLQGMDTDRVQRKQIVDKVREASETWGFFNVLNHGIPVTVLEEMMNGVRRFY 116

Query: 715 DLNNEVKKEWYSRDTKVRVRFYSNFDLYTSKAASWRDTLTFLMSTPEPINPEEMPTICRD 536
           + + E+K+E+Y+RD   ++ + SNFDLYT+KAASWRDT   LM+ P P NP+++P  CRD
Sbjct: 117 EQDTELKQEFYTRDVSRKLVYNSNFDLYTAKAASWRDTFYCLMA-PHPPNPQDLPAACRD 175

Query: 535 TTIEYTKHVTDXXXXXXXXXXXXXXLKANFLKQMECAEACSLICNYYPACPEPELTIGAA 356
             +EY + V                L  N LK M+CAE  +++C+YYPACP+PELT+G  
Sbjct: 176 ILMEYKEQVMKLGFKLLELMSEALGLNPNHLKGMDCAEGLAMVCHYYPACPQPELTLGTG 235

Query: 355 RHTDPIVLSILLQDNIGGLQVLHQGQWVDIHPIPGALVVNIGDLLQIVSNDKLKSVEHRA 176
            HTD   L++LLQD IGGLQVLHQ QWVD+ P+PGALV+N+GDLLQ+++ND+ KSVEHR 
Sbjct: 236 FHTDNDFLTVLLQDQIGGLQVLHQDQWVDVPPMPGALVINVGDLLQLITNDRFKSVEHRV 295

Query: 175 LSNHIGPRVSVACFLSLRFDVATRPCGPIKDLISDENPPVYRDILMKEYMDHFAHQGL 2
           L+NH GPRVS+ACF S     +++  GPIK+L+S+ENP  YR+  + +Y+ HF  +GL
Sbjct: 296 LANHTGPRVSIACFFSTSVQPSSKLYGPIKELLSEENPARYRETTVSDYVAHFQEKGL 353


>ref|XP_002284638.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1
           [Vitis vinifera]
          Length = 363

 Score =  328 bits (841), Expect = 1e-87
 Identities = 157/298 (52%), Positives = 211/298 (70%)
 Frame = -1

Query: 895 THFQIPIIDLQGIKDDKGMQQVIVKEILSASEKWGFFLVVNHGVPSSVMEGMIKGVAKFH 716
           T F+ P+IDL G+  D   ++ IV+ +  ASE WG F VVNHG+P SV+E M+ GV +F+
Sbjct: 56  TQFKFPVIDLHGMDSDPIRRKKIVEMVREASETWGLFTVVNHGIPVSVLEEMMDGVHRFY 115

Query: 715 DLNNEVKKEWYSRDTKVRVRFYSNFDLYTSKAASWRDTLTFLMSTPEPINPEEMPTICRD 536
           + +NEVKKE+Y+RD   +V + SNFDLY SKAA+WRDT   LM+ P P+NP+E+P  CRD
Sbjct: 116 EQDNEVKKEFYTRDLTRKVIYNSNFDLYVSKAANWRDTFYCLMA-PHPLNPQELPATCRD 174

Query: 535 TTIEYTKHVTDXXXXXXXXXXXXXXLKANFLKQMECAEACSLICNYYPACPEPELTIGAA 356
             +EY + V                L  N LK M+CAE  +++C+YYPACP+PELT+G  
Sbjct: 175 ILMEYKEQVMRLGLKLLELMSEAIGLNPNHLKDMDCAEGLAILCHYYPACPQPELTMGTT 234

Query: 355 RHTDPIVLSILLQDNIGGLQVLHQGQWVDIHPIPGALVVNIGDLLQIVSNDKLKSVEHRA 176
           +H+D   L+ILLQD IGGLQVLHQ QWVD+ P PGALV+N+GDLLQ+++ND+ KSVEHR 
Sbjct: 235 KHSDNDFLTILLQDQIGGLQVLHQDQWVDVPPEPGALVINVGDLLQLITNDRFKSVEHRV 294

Query: 175 LSNHIGPRVSVACFLSLRFDVATRPCGPIKDLISDENPPVYRDILMKEYMDHFAHQGL 2
           L+N  GPRVSVACF S     +++  GPIK+L+S ENPP YR+  +++Y+ HF  +GL
Sbjct: 295 LANRRGPRVSVACFFSTSHLPSSKLYGPIKELLSKENPPKYRETTVRDYVLHFRSKGL 352


>ref|XP_002284642.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1
           [Vitis vinifera] gi|147807864|emb|CAN66433.1|
           hypothetical protein VITISV_027452 [Vitis vinifera]
          Length = 365

 Score =  327 bits (837), Expect = 3e-87
 Identities = 153/299 (51%), Positives = 210/299 (70%), Gaps = 1/299 (0%)
 Frame = -1

Query: 895 THFQIPIIDLQGIKDDKGMQQVIVKEILSASEKWGFFLVVNHGVPSSVMEGMIKGVAKFH 716
           T F  P++DLQG+ +D   +  IV  +  ASE WGFF VVNHG+P SV+E M++GV +F+
Sbjct: 57  TQFNFPVVDLQGMDNDPIRRNKIVDMVKDASETWGFFNVVNHGIPVSVLEEMMEGVLRFY 116

Query: 715 DLNNEVKKEWYSRDTKVRVRFY-SNFDLYTSKAASWRDTLTFLMSTPEPINPEEMPTICR 539
           + + EVKK++Y+RD   +   Y SNFDLYT+ AA+WRDT   LM+ P P NPEE+P  CR
Sbjct: 117 EQDTEVKKQFYTRDASRKKMVYNSNFDLYTAPAANWRDTFYCLMA-PHPPNPEELPAACR 175

Query: 538 DTTIEYTKHVTDXXXXXXXXXXXXXXLKANFLKQMECAEACSLICNYYPACPEPELTIGA 359
           D  +EY   +                L  N LK M+C E  S++C+YYP+CP+PELT+G 
Sbjct: 176 DILMEYKDQIMRLGFKLFELISEALGLNPNHLKDMDCTEGLSILCHYYPSCPQPELTMGT 235

Query: 358 ARHTDPIVLSILLQDNIGGLQVLHQGQWVDIHPIPGALVVNIGDLLQIVSNDKLKSVEHR 179
            +H D   L++LLQD IGGLQVLHQGQW+D+ P+PGALV+N+GDLLQ+++ND+ KSVEHR
Sbjct: 236 TKHADNDFLTVLLQDQIGGLQVLHQGQWIDVPPMPGALVINVGDLLQLITNDRFKSVEHR 295

Query: 178 ALSNHIGPRVSVACFLSLRFDVATRPCGPIKDLISDENPPVYRDILMKEYMDHFAHQGL 2
            L+NHIGPRVSVACF S     +++  GPIK+L+S+ENPP Y++  + +Y+ +F  +GL
Sbjct: 296 VLANHIGPRVSVACFFSTSIQPSSKLYGPIKELLSEENPPKYKETTVGDYVAYFNSKGL 354


>gb|AFK38498.1| unknown [Lotus japonicus]
          Length = 374

 Score =  325 bits (833), Expect = 9e-87
 Identities = 151/298 (50%), Positives = 209/298 (70%)
 Frame = -1

Query: 895 THFQIPIIDLQGIKDDKGMQQVIVKEILSASEKWGFFLVVNHGVPSSVMEGMIKGVAKFH 716
           +HFQIPIIDL+ ++     ++ IVK++  ASE  GFF VVNHG+P  ++  MI+GV +FH
Sbjct: 66  SHFQIPIIDLENLQGHVAERKDIVKKVQVASETCGFFQVVNHGIPKEILHEMIEGVCRFH 125

Query: 715 DLNNEVKKEWYSRDTKVRVRFYSNFDLYTSKAASWRDTLTFLMSTPEPINPEEMPTICRD 536
           +   +VKKE+++RD   ++RF SNFDLY SK A+WRD+  F    P+P  PEE+P+ICRD
Sbjct: 126 EQPLDVKKEFFNRDFSKKMRFNSNFDLYQSKVANWRDSF-FCTMAPDPPEPEELPSICRD 184

Query: 535 TTIEYTKHVTDXXXXXXXXXXXXXXLKANFLKQMECAEACSLICNYYPACPEPELTIGAA 356
            T  Y+ HV                LK   L++MEC +  SL+C+YYPACPEP+ TIG  
Sbjct: 185 ITFLYSDHVKRLGLTLLELLSEALGLKPKHLEEMECDKGHSLVCHYYPACPEPDRTIGTT 244

Query: 355 RHTDPIVLSILLQDNIGGLQVLHQGQWVDIHPIPGALVVNIGDLLQIVSNDKLKSVEHRA 176
            H+DP   +ILLQD+IGGLQVL+Q QWVD+ P+ GALV+N+GD+LQ++SNDK KS  HR 
Sbjct: 245 EHSDPDFFTILLQDHIGGLQVLYQNQWVDVKPVDGALVINLGDILQLISNDKFKSARHRV 304

Query: 175 LSNHIGPRVSVACFLSLRFDVATRPCGPIKDLISDENPPVYRDILMKEYMDHFAHQGL 2
           L+N +GPR+SVACF S  F    R  GPIK+L+S+ENPP+Y++  +++Y+ H+  +GL
Sbjct: 305 LANKVGPRISVACFFSTHFQPCNRVYGPIKELLSEENPPLYKETTVRDYVAHYHSKGL 362


>ref|XP_003632012.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 3 [Vitis
            vinifera]
          Length = 673

 Score =  321 bits (823), Expect = 1e-85
 Identities = 155/299 (51%), Positives = 211/299 (70%)
 Frame = -1

Query: 898  LTHFQIPIIDLQGIKDDKGMQQVIVKEILSASEKWGFFLVVNHGVPSSVMEGMIKGVAKF 719
            LT F  P+IDLQ +  D   ++ IV  +  ASE WGFF VVNHG+  +V+E M  GV +F
Sbjct: 365  LTKFSFPVIDLQDMNTDPARRKEIVDMVRDASETWGFFNVVNHGISVTVLEEMKDGVRRF 424

Query: 718  HDLNNEVKKEWYSRDTKVRVRFYSNFDLYTSKAASWRDTLTFLMSTPEPINPEEMPTICR 539
            ++ + EVKK++YSRD + +V + SNFDLY + AA+WRDT  FLM+ P+P +P+E+P   R
Sbjct: 425  YEQDTEVKKQYYSRDLERKVVYNSNFDLYKAPAANWRDTFYFLMA-PQPPDPQELPPAFR 483

Query: 538  DTTIEYTKHVTDXXXXXXXXXXXXXXLKANFLKQMECAEACSLICNYYPACPEPELTIGA 359
            D  IEY   V                LKAN LK M+CAE  +++C+YYPACP+PELT+G 
Sbjct: 484  DILIEYKDEVMKLGFKLLELISEALGLKANHLKDMDCAEGLAMLCHYYPACPQPELTMGT 543

Query: 358  ARHTDPIVLSILLQDNIGGLQVLHQGQWVDIHPIPGALVVNIGDLLQIVSNDKLKSVEHR 179
             +H D   L++LLQD IGGLQVLHQ QWVD+ P+PGALV+NIGDLLQ+++ND+ KSVEHR
Sbjct: 544  TKHADNDFLTVLLQDEIGGLQVLHQDQWVDVPPMPGALVINIGDLLQLITNDRFKSVEHR 603

Query: 178  ALSNHIGPRVSVACFLSLRFDVATRPCGPIKDLISDENPPVYRDILMKEYMDHFAHQGL 2
             L++H GPRVSVACF S     + +  GPIK+L+S+ENPP YR+I +++++ +F  +GL
Sbjct: 604  VLASHKGPRVSVACFFSTALLPSLKLYGPIKELLSEENPPKYREITVRDFVAYFNAKGL 662



 Score =  320 bits (821), Expect = 2e-85
 Identities = 153/299 (51%), Positives = 209/299 (69%), Gaps = 1/299 (0%)
 Frame = -1

Query: 895 THFQIPIIDLQGIKDDKGMQQVIVKEILSASEKWGFFLVVNHGVPSSVMEGMIKGVAKFH 716
           T F  P++DLQG+ +D   +  IV  +  ASE WGFF VVNHG+P SV+E M++GV +FH
Sbjct: 57  TQFNFPVVDLQGMDNDPIRRNKIVDMVRDASETWGFFNVVNHGIPVSVLEEMMEGVRRFH 116

Query: 715 DLNNEVKKEWYSRD-TKVRVRFYSNFDLYTSKAASWRDTLTFLMSTPEPINPEEMPTICR 539
           + + EVKK++Y+RD ++ +V + SNFDLYT+ AA+WRDT   LM+ P P NPEE+P  CR
Sbjct: 117 EQDTEVKKQFYTRDASRKKVMYNSNFDLYTAPAANWRDTFYCLMA-PHPPNPEELPASCR 175

Query: 538 DTTIEYTKHVTDXXXXXXXXXXXXXXLKANFLKQMECAEACSLICNYYPACPEPELTIGA 359
           D  +EY   V                L  N LK M+CAE  S++C+YYP+CP+PELT+G 
Sbjct: 176 DILMEYKDQVMRLGFKLFELISEALGLNPNHLKDMDCAEGLSILCHYYPSCPQPELTMGT 235

Query: 358 ARHTDPIVLSILLQDNIGGLQVLHQGQWVDIHPIPGALVVNIGDLLQIVSNDKLKSVEHR 179
            +H D   L++LLQD IGGLQVLHQGQW+D+ P  GALV+N+GDLLQ+++ND+ KSV+HR
Sbjct: 236 TKHADNDFLTVLLQDQIGGLQVLHQGQWIDVPPRLGALVINVGDLLQLITNDRFKSVKHR 295

Query: 178 ALSNHIGPRVSVACFLSLRFDVATRPCGPIKDLISDENPPVYRDILMKEYMDHFAHQGL 2
             +NHIGPRVSVACF       +++  GPIK+L S+ENPP YR+  + +Y+ +F  +GL
Sbjct: 296 VPANHIGPRVSVACFFRTSIQPSSKLYGPIKELSSEENPPKYRETTVGDYVAYFNSKGL 354


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