BLASTX nr result
ID: Coptis25_contig00028223
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00028223 (382 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002878131.1| binding protein [Arabidopsis lyrata subsp. l... 149 2e-34 ref|NP_001190114.1| condensin complex subunit 1 [Arabidopsis tha... 149 3e-34 ref|NP_191265.2| condensin complex subunit 1 [Arabidopsis thalia... 149 3e-34 emb|CAB72176.1| putative protein [Arabidopsis thaliana] 149 3e-34 ref|XP_003632691.1| PREDICTED: condensin complex subunit 1-like ... 145 3e-33 >ref|XP_002878131.1| binding protein [Arabidopsis lyrata subsp. lyrata] gi|297323969|gb|EFH54390.1| binding protein [Arabidopsis lyrata subsp. lyrata] Length = 1325 Score = 149 bits (376), Expect = 2e-34 Identities = 71/115 (61%), Positives = 91/115 (79%) Frame = -2 Query: 345 MAPPFIFPPNLQTLEQDQEEENSHHLHVQSPTNISSLRSSQLEDFVKGVSFELSNKEFYC 166 MAPPF+FP L+ LE+D E+ +H L Q+P +++SLR S LE+FVKGVSF+LS++E +C Sbjct: 1 MAPPFVFPQILRALEEDPED--NHRLFAQNPVDVTSLRPSDLEEFVKGVSFDLSDRELFC 58 Query: 165 IEDQDIFDRVYSLTKDFTKLPKSCKFNLVECLRSNFSVLLPNVDSLARAAYDNEE 1 IEDQD+FDRVYSL + F LP SCK NLVE LRSN SVLLPNVDS++R+ D E+ Sbjct: 59 IEDQDVFDRVYSLVRSFFSLPPSCKCNLVESLRSNLSVLLPNVDSISRSVQDQED 113 >ref|NP_001190114.1| condensin complex subunit 1 [Arabidopsis thaliana] gi|332646086|gb|AEE79607.1| condensin complex subunit 1 [Arabidopsis thaliana] Length = 1415 Score = 149 bits (375), Expect = 3e-34 Identities = 70/115 (60%), Positives = 91/115 (79%) Frame = -2 Query: 345 MAPPFIFPPNLQTLEQDQEEENSHHLHVQSPTNISSLRSSQLEDFVKGVSFELSNKEFYC 166 MAPPF+FP L+ LE+D E+ +H L Q+P +++SLR S LE+FVKGVSF+LS++E +C Sbjct: 1 MAPPFVFPQILRALEEDPED--NHRLFAQNPVDVTSLRPSDLEEFVKGVSFDLSDRELFC 58 Query: 165 IEDQDIFDRVYSLTKDFTKLPKSCKFNLVECLRSNFSVLLPNVDSLARAAYDNEE 1 +EDQD+FDRVYSL + F LP SCK NLVE LRSN SVLLPNVDS++R+ D E+ Sbjct: 59 VEDQDVFDRVYSLVRSFFSLPPSCKCNLVESLRSNLSVLLPNVDSISRSVQDQED 113 >ref|NP_191265.2| condensin complex subunit 1 [Arabidopsis thaliana] gi|332646085|gb|AEE79606.1| condensin complex subunit 1 [Arabidopsis thaliana] Length = 1396 Score = 149 bits (375), Expect = 3e-34 Identities = 70/115 (60%), Positives = 91/115 (79%) Frame = -2 Query: 345 MAPPFIFPPNLQTLEQDQEEENSHHLHVQSPTNISSLRSSQLEDFVKGVSFELSNKEFYC 166 MAPPF+FP L+ LE+D E+ +H L Q+P +++SLR S LE+FVKGVSF+LS++E +C Sbjct: 1 MAPPFVFPQILRALEEDPED--NHRLFAQNPVDVTSLRPSDLEEFVKGVSFDLSDRELFC 58 Query: 165 IEDQDIFDRVYSLTKDFTKLPKSCKFNLVECLRSNFSVLLPNVDSLARAAYDNEE 1 +EDQD+FDRVYSL + F LP SCK NLVE LRSN SVLLPNVDS++R+ D E+ Sbjct: 59 VEDQDVFDRVYSLVRSFFSLPPSCKCNLVESLRSNLSVLLPNVDSISRSVQDQED 113 >emb|CAB72176.1| putative protein [Arabidopsis thaliana] Length = 1439 Score = 149 bits (375), Expect = 3e-34 Identities = 70/115 (60%), Positives = 91/115 (79%) Frame = -2 Query: 345 MAPPFIFPPNLQTLEQDQEEENSHHLHVQSPTNISSLRSSQLEDFVKGVSFELSNKEFYC 166 MAPPF+FP L+ LE+D E+ +H L Q+P +++SLR S LE+FVKGVSF+LS++E +C Sbjct: 1 MAPPFVFPQILRALEEDPED--NHRLFAQNPVDVTSLRPSDLEEFVKGVSFDLSDRELFC 58 Query: 165 IEDQDIFDRVYSLTKDFTKLPKSCKFNLVECLRSNFSVLLPNVDSLARAAYDNEE 1 +EDQD+FDRVYSL + F LP SCK NLVE LRSN SVLLPNVDS++R+ D E+ Sbjct: 59 VEDQDVFDRVYSLVRSFFSLPPSCKCNLVESLRSNLSVLLPNVDSISRSVQDQED 113 >ref|XP_003632691.1| PREDICTED: condensin complex subunit 1-like [Vitis vinifera] Length = 1346 Score = 145 bits (367), Expect = 3e-33 Identities = 73/115 (63%), Positives = 90/115 (78%) Frame = -2 Query: 345 MAPPFIFPPNLQTLEQDQEEENSHHLHVQSPTNISSLRSSQLEDFVKGVSFELSNKEFYC 166 MAP FIFPPNLQ LE E + L Q+P +ISSLRSS+LE+FV+GVSF+LS+KE +C Sbjct: 1 MAPSFIFPPNLQALEN---ESHDGRLCAQNPIDISSLRSSELEEFVRGVSFDLSDKELFC 57 Query: 165 IEDQDIFDRVYSLTKDFTKLPKSCKFNLVECLRSNFSVLLPNVDSLARAAYDNEE 1 +E+QD+FDRVYSL K F+ L SCK NLVE LRSN SVLLPNVDSL+R + D+ + Sbjct: 58 VEEQDVFDRVYSLIKGFSTLTPSCKLNLVESLRSNLSVLLPNVDSLSRVSQDHAD 112