BLASTX nr result

ID: Coptis25_contig00028219 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028219
         (750 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN62182.1| hypothetical protein VITISV_044400 [Vitis vinifera]    90   9e-18
emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]    87   4e-15
emb|CAN82221.1| hypothetical protein VITISV_015226 [Vitis vinifera]    83   5e-14
emb|CCH50966.1| T4.5 [Malus x robusta]                                 80   4e-13
ref|XP_003621710.1| Receptor-like protein kinase [Medicago trunc...    60   1e-12

>emb|CAN62182.1| hypothetical protein VITISV_044400 [Vitis vinifera]
          Length = 920

 Score = 89.7 bits (221), Expect(2) = 9e-18
 Identities = 72/233 (30%), Positives = 109/233 (46%), Gaps = 5/233 (2%)
 Frame = -1

Query: 738 HVTLDLSNLYVFSEYNGGDKVIFSNGEGLDIKNTGSPLIPTLLTKFH*NK-HYT*LVICT 562
           H+T +L NL   S Y G D+V   N + L I N GS    +    F   K  +T +V+  
Sbjct: 204 HLTQNLGNLTSTSPYTGTDRVTIGNXKHLSISNIGSKXFHSHTHXFQLKKDRHTKMVLAQ 263

Query: 561 KICPR*PLFHNFYIFL*FM*GILSHRR*FSKNSLLLAFYPISFIQV*QTTNFSCQ*SFII 382
                  L +  Y F      + S+++ +S  +   AF+          ++FS   S I 
Sbjct: 264 G-----KLENGLYKF-----PVFSNKKPYSSVNNASAFH----------SHFS---STIE 300

Query: 381 NMAQ----GLGHPAQPILVFAQTKLSVKRSSQRSSFLPSCQLGKNHRLPFFLSKGRSSSP 214
           N A+     LGH A  I+       +V     +S+    CQL K+HRLP  LS  R+S P
Sbjct: 301 NKAELWHNRLGHVASDIVSKVMNTCNVASGKYKSTVCSDCQLAKSHRLPTQLSNFRASKP 360

Query: 213 LQLIHIDPWGPSPIASCSGSR*YVSLVDDFSRFC*ELINTLWYYSFIFRAPTL 55
           L+L++ D WGP+ + S SG++ ++  VDD+SR+        W+YS      TL
Sbjct: 361 LELVYTDIWGPASVKSTSGAKYFILFVDDYSRY-------TWFYSLQTNDQTL 406



 Score = 26.6 bits (57), Expect(2) = 9e-18
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = -3

Query: 49  QNGVVERKHSHILE 8
           QNG VERKH H++E
Sbjct: 447 QNGRVERKHXHVVE 460


>emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]
          Length = 1449

 Score = 87.0 bits (214), Expect = 4e-15
 Identities = 66/225 (29%), Positives = 107/225 (47%), Gaps = 17/225 (7%)
 Frame = -1

Query: 738  HVTLDLSNLYVFSEYNGGDKVIFSNGEGLDIKNTGSPLIPTLLTKF------H*NKHYT* 577
            H++  +  L     Y G DKVI  NG+ L I +TG+   P+    F      H     T 
Sbjct: 387  HLSQSIDPLSDVQPYMGNDKVIVGNGKHLRILHTGTTFFPSSSKTFQLRQVLHVPDIATN 446

Query: 576  LVICTKICPR*PLFHNFYIFL*FM*GILSHRR*FSKNSLLLAFY---------PISFIQ- 427
            L+  ++ C     F  F+    F+   ++ ++   + SL    Y         P +F+  
Sbjct: 447  LISVSQFCADNNTFFEFHPRFFFVKDQVT-KKILLQGSLEHGLYRFPARFVPSPAAFVSS 505

Query: 426  -V*QTTNFSCQ*SFIINMAQGLGHPAQPILVFAQTKLSVKRSSQRSSFLPSCQLGKNHRL 250
               +++N S   +  +  ++ LGHPA  IL    T  ++     +++   +CQ  K+H+L
Sbjct: 506  SYDRSSNLSLTTTTTLWHSR-LGHPADNILKHILTSCNISHQCHKNNVCCACQFAKSHKL 564

Query: 249  PFFLSKGRSSSPLQLIHIDPWGPSPIASCSGSR*YVSLVDDFSRF 115
            PF +   R+S PL L+H D WGP  I S +G+R ++  VDDFSRF
Sbjct: 565  PFNVXVSRASHPLALLHADLWGPXSIPSTTGARYFILFVDDFSRF 609


>emb|CAN82221.1| hypothetical protein VITISV_015226 [Vitis vinifera]
          Length = 1007

 Score = 83.2 bits (204), Expect = 5e-14
 Identities = 63/224 (28%), Positives = 103/224 (45%), Gaps = 16/224 (7%)
 Frame = -1

Query: 738 HVTLDLSNLYVFSEYNGGDKVIFSNGEGLDIKNTGSPLIPT------LLTKFH*NKHYT* 577
           H++  ++ L     Y G DKVI  NG+ L I +T +   P+      L    H     T 
Sbjct: 39  HLSQSVNPLSDVQPYMGNDKVIVGNGKHLRILHTYTTFFPSSSKIFQLRQVLHVPDIATN 98

Query: 576 LVICTKICPR*PLFHNFYIFL*FM*GILSHRR*FSKNSLLLAFY---------PISFIQV 424
           L+  ++ C     F  F+    F+   ++ ++   + SL    Y         P +F+  
Sbjct: 99  LISVSQFCADNNTFFEFHPRFFFVKDQVT-KKILLQGSLEHGLYRFPARFVPSPTAFVSS 157

Query: 423 *QTTNFSCQ*SFIINMAQG-LGHPAQPILVFAQTKLSVKRSSQRSSFLPSCQLGKNHRLP 247
               + +   + I  +    LGHPA  IL    T  ++     +++   +CQ  K+H+LP
Sbjct: 158 SYDRSSNISLTTITTLWHSRLGHPADNILKHILTSCNISHQCHKNNVCCACQFAKSHKLP 217

Query: 246 FFLSKGRSSSPLQLIHIDPWGPSPIASCSGSR*YVSLVDDFSRF 115
           F +S  R+S P  L+H D WGP+ I S +G+R ++  VDDFS F
Sbjct: 218 FNVSVSRASHPFALLHADLWGPTSIPSTTGARYFILFVDDFSHF 261


>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score = 80.5 bits (197), Expect = 4e-13
 Identities = 78/259 (30%), Positives = 107/259 (41%), Gaps = 34/259 (13%)
 Frame = -1

Query: 738  HVTLDLSNLYVFSEYNGGDKVIFSNGEGLDIKNTGSPLIPTLLTKFH*NKHYT*LVICTK 559
            HVT D S L     Y+G D++   +G+GL I +TGS LI T        KH T  +    
Sbjct: 600  HVTPDPSALNSAIPYSGNDQLFVGDGKGLCISHTGSALIRT--------KHATFRLNDVL 651

Query: 558  ICPR*PLFHNFYIFL*FM*GILSHRR*FSKNSLLLAFYPISFI--------QV*QTTNFS 403
            + P+    HN          +LS  +    N   L F P  F          + Q  +  
Sbjct: 652  LVPQ--ASHN----------LLSVYKFVYDNWCYLTFDPFGFYVKDLSTGKMLFQGPSEG 699

Query: 402  CQ*SFIINMAQG------------------------LGHPAQPIL--VFAQTKLSVKRSS 301
                F  N + G                        LGHP+   L  V  +  L V    
Sbjct: 700  GLYPFYWNASNGVSGIAISPTALMIAKADIHTWHRRLGHPSGGTLHSVVHKNHLPVIGYV 759

Query: 300  QRSSFLPSCQLGKNHRLPFFLSKGRSSSPLQLIHIDPWGPSPIASCSGSR*YVSLVDDFS 121
               S   +CQLGK++RL F      SS PLQL+H D WGPSP +SC+G R Y+ +VDDF+
Sbjct: 760  NNMSVCTACQLGKSYRLSFSTLPCTSSRPLQLLHTDVWGPSPTSSCTGYRFYLIIVDDFT 819

Query: 120  RFC*ELINTLWYYSFIFRA 64
            ++        W Y   F++
Sbjct: 820  KYS-------WLYPLHFKS 831


>ref|XP_003621710.1| Receptor-like protein kinase [Medicago truncatula]
           gi|355496725|gb|AES77928.1| Receptor-like protein kinase
           [Medicago truncatula]
          Length = 1085

 Score = 60.5 bits (145), Expect(2) = 1e-12
 Identities = 37/85 (43%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
 Frame = -1

Query: 366 LGHPAQPILVFAQTKLSVKRSSQRSSF-LPSCQLGKNHRLPFFLSKG-RSSSPLQLIHID 193
           LGHP+     F + K+ V + S   S    SCQLGK+ R  F  S   RS SP  ++H D
Sbjct: 160 LGHPS-----FDKLKVLVPQLSHLKSLDCESCQLGKHVRASFPSSPNKRSKSPFDIVHSD 214

Query: 192 PWGPSPIASCSGSR*YVSLVDDFSR 118
            WGPS + S  G + YV+ +DDFSR
Sbjct: 215 VWGPSRVMSTLGYKYYVTFIDDFSR 239



 Score = 38.5 bits (88), Expect(2) = 1e-12
 Identities = 15/22 (68%), Positives = 19/22 (86%)
 Frame = -3

Query: 70  SRTYTPQQNGVVERKHSHILET 5
           SR +TPQQNGV ERKH H+++T
Sbjct: 280 SRPHTPQQNGVAERKHRHLVDT 301


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