BLASTX nr result

ID: Coptis25_contig00028203 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028203
         (1235 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38103.3| unnamed protein product [Vitis vinifera]              655   0.0  
ref|XP_003521732.1| PREDICTED: probable translation initiation f...   626   e-177
ref|XP_003521731.1| PREDICTED: probable translation initiation f...   626   e-177
ref|XP_002328528.1| predicted protein [Populus trichocarpa] gi|2...   617   e-174
ref|XP_003554678.1| PREDICTED: probable translation initiation f...   612   e-173

>emb|CBI38103.3| unnamed protein product [Vitis vinifera]
          Length = 730

 Score =  655 bits (1690), Expect = 0.0
 Identities = 316/385 (82%), Positives = 357/385 (92%), Gaps = 1/385 (0%)
 Frame = +1

Query: 79   MAQKKGS-RISDDTEELAHVPLQAILLADSFAQKFRPITLERPKVLLPLVNIPMIDYSLA 255
            M Q+KGS R+S+D EEL  VPLQAILLADSFAQKFRPITLERPKVLLPLVN+PMIDY+LA
Sbjct: 1    MVQRKGSTRVSEDAEELVRVPLQAILLADSFAQKFRPITLERPKVLLPLVNVPMIDYTLA 60

Query: 256  WLESAGVEEVYVFCCAHSKQVITYLQNSQWLSIPKFTVTTIESNDSVSAGDALRLIYERN 435
            WLESAG+EEV+VFCCAHSKQVI YL+NS W+S+P F VTTIES++SVSAGDALRLIYER+
Sbjct: 61   WLESAGIEEVFVFCCAHSKQVINYLENSHWVSLPHFEVTTIESHNSVSAGDALRLIYERH 120

Query: 436  VIHGDFVLISGDTVSNMSLTQALQEHKERKKKDSNAVMTMVIKKSKPSSLTRQTRLGTDE 615
            VIHGDFVLI+GDTVSNMSLTQALQEHK+R+KKD+NAVMTMVIK+SKPS +T Q+RLGTDE
Sbjct: 121  VIHGDFVLITGDTVSNMSLTQALQEHKDRRKKDNNAVMTMVIKRSKPSPITHQSRLGTDE 180

Query: 616  LFMAIDPDTKELLYYEDKADCSKGILSLDKTLLADNPAVYLHNDKQDCYIDICSPEVLSL 795
            LFMAIDP TK+LLYYEDKAD  KG LSL+K LLADNP++ LHNDKQDCYIDICSPEVLS+
Sbjct: 181  LFMAIDPHTKQLLYYEDKADHLKGTLSLEKMLLADNPSISLHNDKQDCYIDICSPEVLSI 240

Query: 796  FTDNFDYQHLRRHFVKGLLLDDIMGYKIFTYEIHSSYAAQVDNFRSYDTISKDIVQRWTY 975
            FTDNFDYQHLRRHF+KGLL+DDIMGYKIFT+EIHS+YAA++DNFRSYDTISKDI+QRWTY
Sbjct: 241  FTDNFDYQHLRRHFIKGLLVDDIMGYKIFTHEIHSNYAARIDNFRSYDTISKDIIQRWTY 300

Query: 976  PLVPDVQFSGNCPTKLERQGMYKASDIKQSRSAQIGSFTVVGKGTSIGDHSKISNSVIGE 1155
            PLVPDVQF GNC  KLERQGMY+A DI QSRSAQIG F+++G GT+IGD++KISNSVIGE
Sbjct: 301  PLVPDVQFLGNCAAKLERQGMYRALDIGQSRSAQIGPFSIIGNGTNIGDNTKISNSVIGE 360

Query: 1156 GCVIGSNVIIEGSYIWNNVTIQDDC 1230
             C IGSNV IEGSYIW+NVTI+D C
Sbjct: 361  RCTIGSNVSIEGSYIWDNVTIEDGC 385


>ref|XP_003521732.1| PREDICTED: probable translation initiation factor eIF-2B subunit
            epsilon-like isoform 2 [Glycine max]
          Length = 711

 Score =  626 bits (1614), Expect = e-177
 Identities = 304/385 (78%), Positives = 347/385 (90%), Gaps = 1/385 (0%)
 Frame = +1

Query: 82   AQKK-GSRISDDTEELAHVPLQAILLADSFAQKFRPITLERPKVLLPLVNIPMIDYSLAW 258
            AQKK G+R+S+D +EL  VPLQA+LLADSF  KFRPITLERPKVLLPLVN+PMI+Y+L W
Sbjct: 3    AQKKSGARVSEDPDELVRVPLQAVLLADSFTTKFRPITLERPKVLLPLVNVPMINYTLTW 62

Query: 259  LESAGVEEVYVFCCAHSKQVITYLQNSQWLSIPKFTVTTIESNDSVSAGDALRLIYERNV 438
            LESAGVEEV+VFCC+HSKQVI+YL+ S+WLS P FTVTT+ES +SVSAGDALR+IYERNV
Sbjct: 63   LESAGVEEVFVFCCSHSKQVISYLEKSEWLSQPNFTVTTVESQNSVSAGDALRVIYERNV 122

Query: 439  IHGDFVLISGDTVSNMSLTQALQEHKERKKKDSNAVMTMVIKKSKPSSLTRQTRLGTDEL 618
            IHGDFVLISGDTVSNMSLTQAL EHKERKKKDSNAVMTMVIK+SKP+    Q+RLGTDEL
Sbjct: 123  IHGDFVLISGDTVSNMSLTQALLEHKERKKKDSNAVMTMVIKRSKPNPAIHQSRLGTDEL 182

Query: 619  FMAIDPDTKELLYYEDKADCSKGILSLDKTLLADNPAVYLHNDKQDCYIDICSPEVLSLF 798
            FMAIDP+TK+LLYYED+AD SKG L LDK+LLADNP++ LH+DKQDCYIDICSPEVLSLF
Sbjct: 183  FMAIDPNTKQLLYYEDRADQSKGTLHLDKSLLADNPSLSLHHDKQDCYIDICSPEVLSLF 242

Query: 799  TDNFDYQHLRRHFVKGLLLDDIMGYKIFTYEIHSSYAAQVDNFRSYDTISKDIVQRWTYP 978
            TDNFDYQHLRRHFVKGLLLDDIMGYKIF +EIHS YAA++DNFRSYDT+SKDI+ RWTYP
Sbjct: 243  TDNFDYQHLRRHFVKGLLLDDIMGYKIFVHEIHSDYAARIDNFRSYDTVSKDIIHRWTYP 302

Query: 979  LVPDVQFSGNCPTKLERQGMYKASDIKQSRSAQIGSFTVVGKGTSIGDHSKISNSVIGEG 1158
            LVPDV   G+  TKLERQG+Y+AS+I QS+SA IG FTV+G GT IG ++KI NSVIGEG
Sbjct: 303  LVPDVMNFGDTATKLERQGIYRASEISQSQSAVIGPFTVIGSGTKIGHNTKILNSVIGEG 362

Query: 1159 CVIGSNVIIEGSYIWNNVTIQDDCK 1233
            C IGSNVIIEG YIW+N++I+D CK
Sbjct: 363  CKIGSNVIIEGCYIWDNISIEDGCK 387


>ref|XP_003521731.1| PREDICTED: probable translation initiation factor eIF-2B subunit
            epsilon-like isoform 1 [Glycine max]
          Length = 724

 Score =  626 bits (1614), Expect = e-177
 Identities = 304/385 (78%), Positives = 347/385 (90%), Gaps = 1/385 (0%)
 Frame = +1

Query: 82   AQKK-GSRISDDTEELAHVPLQAILLADSFAQKFRPITLERPKVLLPLVNIPMIDYSLAW 258
            AQKK G+R+S+D +EL  VPLQA+LLADSF  KFRPITLERPKVLLPLVN+PMI+Y+L W
Sbjct: 3    AQKKSGARVSEDPDELVRVPLQAVLLADSFTTKFRPITLERPKVLLPLVNVPMINYTLTW 62

Query: 259  LESAGVEEVYVFCCAHSKQVITYLQNSQWLSIPKFTVTTIESNDSVSAGDALRLIYERNV 438
            LESAGVEEV+VFCC+HSKQVI+YL+ S+WLS P FTVTT+ES +SVSAGDALR+IYERNV
Sbjct: 63   LESAGVEEVFVFCCSHSKQVISYLEKSEWLSQPNFTVTTVESQNSVSAGDALRVIYERNV 122

Query: 439  IHGDFVLISGDTVSNMSLTQALQEHKERKKKDSNAVMTMVIKKSKPSSLTRQTRLGTDEL 618
            IHGDFVLISGDTVSNMSLTQAL EHKERKKKDSNAVMTMVIK+SKP+    Q+RLGTDEL
Sbjct: 123  IHGDFVLISGDTVSNMSLTQALLEHKERKKKDSNAVMTMVIKRSKPNPAIHQSRLGTDEL 182

Query: 619  FMAIDPDTKELLYYEDKADCSKGILSLDKTLLADNPAVYLHNDKQDCYIDICSPEVLSLF 798
            FMAIDP+TK+LLYYED+AD SKG L LDK+LLADNP++ LH+DKQDCYIDICSPEVLSLF
Sbjct: 183  FMAIDPNTKQLLYYEDRADQSKGTLHLDKSLLADNPSLSLHHDKQDCYIDICSPEVLSLF 242

Query: 799  TDNFDYQHLRRHFVKGLLLDDIMGYKIFTYEIHSSYAAQVDNFRSYDTISKDIVQRWTYP 978
            TDNFDYQHLRRHFVKGLLLDDIMGYKIF +EIHS YAA++DNFRSYDT+SKDI+ RWTYP
Sbjct: 243  TDNFDYQHLRRHFVKGLLLDDIMGYKIFVHEIHSDYAARIDNFRSYDTVSKDIIHRWTYP 302

Query: 979  LVPDVQFSGNCPTKLERQGMYKASDIKQSRSAQIGSFTVVGKGTSIGDHSKISNSVIGEG 1158
            LVPDV   G+  TKLERQG+Y+AS+I QS+SA IG FTV+G GT IG ++KI NSVIGEG
Sbjct: 303  LVPDVMNFGDTATKLERQGIYRASEISQSQSAVIGPFTVIGSGTKIGHNTKILNSVIGEG 362

Query: 1159 CVIGSNVIIEGSYIWNNVTIQDDCK 1233
            C IGSNVIIEG YIW+N++I+D CK
Sbjct: 363  CKIGSNVIIEGCYIWDNISIEDGCK 387


>ref|XP_002328528.1| predicted protein [Populus trichocarpa] gi|222838243|gb|EEE76608.1|
            predicted protein [Populus trichocarpa]
          Length = 718

 Score =  617 bits (1592), Expect = e-174
 Identities = 300/384 (78%), Positives = 346/384 (90%), Gaps = 2/384 (0%)
 Frame = +1

Query: 85   QKKGS--RISDDTEELAHVPLQAILLADSFAQKFRPITLERPKVLLPLVNIPMIDYSLAW 258
            Q+KG+  R+S+DTE+L   PLQAILLADSFA KFRPITLERPKVLLPLVN+PMIDY+LAW
Sbjct: 4    QRKGAAARVSEDTEDLTRHPLQAILLADSFATKFRPITLERPKVLLPLVNVPMIDYTLAW 63

Query: 259  LESAGVEEVYVFCCAHSKQVITYLQNSQWLSIPKFTVTTIESNDSVSAGDALRLIYERNV 438
            LESAGVEEV+VFCCAHSKQVI YL+ S+W+  P F+V TIES++SVSAGDALRLIYERNV
Sbjct: 64   LESAGVEEVFVFCCAHSKQVIEYLEKSEWILQPNFSVVTIESHNSVSAGDALRLIYERNV 123

Query: 439  IHGDFVLISGDTVSNMSLTQALQEHKERKKKDSNAVMTMVIKKSKPSSLTRQTRLGTDEL 618
            I+GDFVLISGDTVSNMSLTQ +QEHKER+KKDSNAVMTMVIK+SK S +T Q+RLGTDEL
Sbjct: 124  INGDFVLISGDTVSNMSLTQVIQEHKERRKKDSNAVMTMVIKQSKLSPITHQSRLGTDEL 183

Query: 619  FMAIDPDTKELLYYEDKADCSKGILSLDKTLLADNPAVYLHNDKQDCYIDICSPEVLSLF 798
            F+AIDP TK+LL+YE+K D  +GI+ LD  LL DNP++ LHNDKQDCYIDICS EVLSLF
Sbjct: 184  FLAIDPQTKQLLFYEEKTDNLRGIIPLDNALLGDNPSICLHNDKQDCYIDICSQEVLSLF 243

Query: 799  TDNFDYQHLRRHFVKGLLLDDIMGYKIFTYEIHSSYAAQVDNFRSYDTISKDIVQRWTYP 978
            TDNFDYQHLRRHFVKGLL+DDIMGYKIFT+EIHSSYAA++DN+RSYDTISKDI+QRWTYP
Sbjct: 244  TDNFDYQHLRRHFVKGLLVDDIMGYKIFTHEIHSSYAARIDNYRSYDTISKDIIQRWTYP 303

Query: 979  LVPDVQFSGNCPTKLERQGMYKASDIKQSRSAQIGSFTVVGKGTSIGDHSKISNSVIGEG 1158
             VPDV FSGN  T LER+GMY+AS+I+QSRSA+IG FTV+GKGT IG++S ISNSVIG+G
Sbjct: 304  FVPDVMFSGNSATHLEREGMYRASEIEQSRSARIGPFTVIGKGTRIGNNSNISNSVIGKG 363

Query: 1159 CVIGSNVIIEGSYIWNNVTIQDDC 1230
            C IGSNV I GSYIW++VTI+D C
Sbjct: 364  CSIGSNVSITGSYIWDSVTIEDGC 387


>ref|XP_003554678.1| PREDICTED: probable translation initiation factor eIF-2B subunit
            epsilon-like isoform 2 [Glycine max]
          Length = 716

 Score =  612 bits (1579), Expect = e-173
 Identities = 302/388 (77%), Positives = 342/388 (88%), Gaps = 4/388 (1%)
 Frame = +1

Query: 82   AQKKGSRISDDTEELAHVPLQAILLADSFAQKFRPITLERPKVLLPLVNIPMIDYSLAWL 261
            AQKK  R+S+D +EL  VPLQAILLADSF  KFRPITLERPKVLLPLVN+PMI+Y+L WL
Sbjct: 3    AQKK--RVSEDPDELVRVPLQAILLADSFTTKFRPITLERPKVLLPLVNVPMINYTLTWL 60

Query: 262  ESAGVEEVYVFCCAHSKQVITYLQNSQWLSIPKFTVTTIESNDSVSAGDALRLIYERNV- 438
            ESAGVE+V+VFCC+HSKQVI+YL+ S+WLS P FTVTT+ES +SVSAGDALR+IYERNV 
Sbjct: 61   ESAGVEDVFVFCCSHSKQVISYLEKSEWLSQPNFTVTTVESQNSVSAGDALRVIYERNVV 120

Query: 439  ---IHGDFVLISGDTVSNMSLTQALQEHKERKKKDSNAVMTMVIKKSKPSSLTRQTRLGT 609
               IHGDFVLISGDTVSNMSLTQAL EHKERKKKDSNAVMTMVIK+SKP+    Q+RLGT
Sbjct: 121  CLSIHGDFVLISGDTVSNMSLTQALLEHKERKKKDSNAVMTMVIKRSKPNPAIHQSRLGT 180

Query: 610  DELFMAIDPDTKELLYYEDKADCSKGILSLDKTLLADNPAVYLHNDKQDCYIDICSPEVL 789
            DELFMAIDP+TK+LLYYEDKAD SKG L LDK+LL DNP++ LH+DKQDCYIDICSPEVL
Sbjct: 181  DELFMAIDPNTKQLLYYEDKADQSKGKLHLDKSLLFDNPSLSLHHDKQDCYIDICSPEVL 240

Query: 790  SLFTDNFDYQHLRRHFVKGLLLDDIMGYKIFTYEIHSSYAAQVDNFRSYDTISKDIVQRW 969
            SLFTDNFDYQHLRRHFVKGLL+DDIMGYKIF +EIHS YAA++DNFR YDT+SKDI+ RW
Sbjct: 241  SLFTDNFDYQHLRRHFVKGLLVDDIMGYKIFVHEIHSDYAARIDNFRGYDTVSKDIIHRW 300

Query: 970  TYPLVPDVQFSGNCPTKLERQGMYKASDIKQSRSAQIGSFTVVGKGTSIGDHSKISNSVI 1149
            TYPLVPDV   GN  TKLERQGMY+AS+I Q +SA IG FTV+G  T IG+++KISNSVI
Sbjct: 301  TYPLVPDVMNFGNTATKLERQGMYRASEISQLQSAVIGPFTVIGSDTKIGNNTKISNSVI 360

Query: 1150 GEGCVIGSNVIIEGSYIWNNVTIQDDCK 1233
            GEGC IGSNVIIEG YIW+N+ I+D CK
Sbjct: 361  GEGCKIGSNVIIEGCYIWDNIIIEDGCK 388


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