BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028202
         (268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521705.1| poly(A) polymerase, putative [Ricinus commun...    62   4e-08
emb|CAN80033.1| hypothetical protein VITISV_007071 [Vitis vinifera]    60   1e-07
ref|NP_179349.2| polynucleotide adenylyltransferase-like protein...    56   3e-06
dbj|BAC41875.1| putative poly(A) polymerase [Arabidopsis thaliana]     56   3e-06

>ref|XP_002521705.1| poly(A) polymerase, putative [Ricinus communis]
           gi|223539096|gb|EEF40692.1| poly(A) polymerase, putative
           [Ricinus communis]
          Length = 675

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 33/59 (55%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
 Frame = -2

Query: 267 VFISKHMGRTVAELFEVLLDDVDESQN-RSCFEIDYELLKQGNHGEIRFVLGKVIMDTL 94
           VF+SK +   VA+LF VL+DDV+  +  R  F IDY LL +GN  E RFVLGKVI++TL
Sbjct: 450 VFVSKKIANDVAQLFNVLVDDVESYKTERESFMIDYYLLGKGNQHETRFVLGKVILETL 508


>emb|CAN80033.1| hypothetical protein VITISV_007071 [Vitis vinifera]
          Length = 693

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 33/92 (35%), Positives = 57/92 (61%), Gaps = 4/92 (4%)
 Frame = -2

Query: 267 VFISKHMGRTVAELFEVLLDDVDE-SQNRSCFEIDYELLKQGNHGEIRFVLGKVIMDTLG 91
           VF+ K M   VA +F VL++ ++   + R   +IDY LL +G+  E RFVLGKVIMDT+ 
Sbjct: 458 VFVQKRMAERVAHIFNVLVNGIESYEEGRESPDIDYYLLGKGDLRETRFVLGKVIMDTMS 517

Query: 90  SVSIH---DQLQELQHLPLSHSDKQQKVIGEE 4
           S  +    + L+E   L +S+++++ + + ++
Sbjct: 518 SELVQMGTEVLEEKNQLHMSYNEQKPEALEQD 549


>ref|NP_179349.2| polynucleotide adenylyltransferase-like protein [Arabidopsis
           thaliana] gi|330251561|gb|AEC06655.1| polynucleotide
           adenylyltransferase-like protein [Arabidopsis thaliana]
          Length = 757

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 31/71 (43%), Positives = 42/71 (59%)
 Frame = -2

Query: 267 VFISKHMGRTVAELFEVLLDDVDESQNRSCFEIDYELLKQGNHGEIRFVLGKVIMDTLGS 88
           VFI K  GR VAE F  L D       +  F IDY LL +GN  E+RFVLGK+I+DT+  
Sbjct: 468 VFIPKKKGRDVAEGFMRLSDVESYESQKEGFSIDYVLLGKGNPCEVRFVLGKIILDTITE 527

Query: 87  VSIHDQLQELQ 55
            ++ + L  ++
Sbjct: 528 GTVIEPLNSVK 538


>dbj|BAC41875.1| putative poly(A) polymerase [Arabidopsis thaliana]
          Length = 571

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 31/71 (43%), Positives = 42/71 (59%)
 Frame = -2

Query: 267 VFISKHMGRTVAELFEVLLDDVDESQNRSCFEIDYELLKQGNHGEIRFVLGKVIMDTLGS 88
           VFI K  GR VAE F  L D       +  F IDY LL +GN  E+RFVLGK+I+DT+  
Sbjct: 282 VFIPKKKGRDVAEGFMRLSDVESYESQKEGFSIDYVLLGKGNPCEVRFVLGKIILDTITE 341

Query: 87  VSIHDQLQELQ 55
            ++ + L  ++
Sbjct: 342 GTVIEPLNSVK 352