BLASTX nr result
ID: Coptis25_contig00028202
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00028202 (268 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002521705.1| poly(A) polymerase, putative [Ricinus commun... 62 4e-08 emb|CAN80033.1| hypothetical protein VITISV_007071 [Vitis vinifera] 60 1e-07 ref|NP_179349.2| polynucleotide adenylyltransferase-like protein... 56 3e-06 dbj|BAC41875.1| putative poly(A) polymerase [Arabidopsis thaliana] 56 3e-06 >ref|XP_002521705.1| poly(A) polymerase, putative [Ricinus communis] gi|223539096|gb|EEF40692.1| poly(A) polymerase, putative [Ricinus communis] Length = 675 Score = 62.4 bits (150), Expect = 4e-08 Identities = 33/59 (55%), Positives = 42/59 (71%), Gaps = 1/59 (1%) Frame = -2 Query: 267 VFISKHMGRTVAELFEVLLDDVDESQN-RSCFEIDYELLKQGNHGEIRFVLGKVIMDTL 94 VF+SK + VA+LF VL+DDV+ + R F IDY LL +GN E RFVLGKVI++TL Sbjct: 450 VFVSKKIANDVAQLFNVLVDDVESYKTERESFMIDYYLLGKGNQHETRFVLGKVILETL 508 >emb|CAN80033.1| hypothetical protein VITISV_007071 [Vitis vinifera] Length = 693 Score = 60.5 bits (145), Expect = 1e-07 Identities = 33/92 (35%), Positives = 57/92 (61%), Gaps = 4/92 (4%) Frame = -2 Query: 267 VFISKHMGRTVAELFEVLLDDVDE-SQNRSCFEIDYELLKQGNHGEIRFVLGKVIMDTLG 91 VF+ K M VA +F VL++ ++ + R +IDY LL +G+ E RFVLGKVIMDT+ Sbjct: 458 VFVQKRMAERVAHIFNVLVNGIESYEEGRESPDIDYYLLGKGDLRETRFVLGKVIMDTMS 517 Query: 90 SVSIH---DQLQELQHLPLSHSDKQQKVIGEE 4 S + + L+E L +S+++++ + + ++ Sbjct: 518 SELVQMGTEVLEEKNQLHMSYNEQKPEALEQD 549 >ref|NP_179349.2| polynucleotide adenylyltransferase-like protein [Arabidopsis thaliana] gi|330251561|gb|AEC06655.1| polynucleotide adenylyltransferase-like protein [Arabidopsis thaliana] Length = 757 Score = 56.2 bits (134), Expect = 3e-06 Identities = 31/71 (43%), Positives = 42/71 (59%) Frame = -2 Query: 267 VFISKHMGRTVAELFEVLLDDVDESQNRSCFEIDYELLKQGNHGEIRFVLGKVIMDTLGS 88 VFI K GR VAE F L D + F IDY LL +GN E+RFVLGK+I+DT+ Sbjct: 468 VFIPKKKGRDVAEGFMRLSDVESYESQKEGFSIDYVLLGKGNPCEVRFVLGKIILDTITE 527 Query: 87 VSIHDQLQELQ 55 ++ + L ++ Sbjct: 528 GTVIEPLNSVK 538 >dbj|BAC41875.1| putative poly(A) polymerase [Arabidopsis thaliana] Length = 571 Score = 56.2 bits (134), Expect = 3e-06 Identities = 31/71 (43%), Positives = 42/71 (59%) Frame = -2 Query: 267 VFISKHMGRTVAELFEVLLDDVDESQNRSCFEIDYELLKQGNHGEIRFVLGKVIMDTLGS 88 VFI K GR VAE F L D + F IDY LL +GN E+RFVLGK+I+DT+ Sbjct: 282 VFIPKKKGRDVAEGFMRLSDVESYESQKEGFSIDYVLLGKGNPCEVRFVLGKIILDTITE 341 Query: 87 VSIHDQLQELQ 55 ++ + L ++ Sbjct: 342 GTVIEPLNSVK 352