BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028199
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511630.1| structural constituent of nuclear pore, puta...    70   1e-10
ref|XP_004164977.1| PREDICTED: nucleoporin nsp1-like [Cucumis sa...    69   3e-10
ref|XP_004140612.1| PREDICTED: LOW QUALITY PROTEIN: nucleoporin ...    69   3e-10
ref|XP_003517940.1| PREDICTED: uncharacterized protein LOC100803...    68   7e-10
emb|CBI16624.3| unnamed protein product [Vitis vinifera]               67   1e-09

>ref|XP_002511630.1| structural constituent of nuclear pore, putative [Ricinus communis]
           gi|223548810|gb|EEF50299.1| structural constituent of
           nuclear pore, putative [Ricinus communis]
          Length = 811

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 32/45 (71%), Positives = 39/45 (86%)
 Frame = +2

Query: 2   ILNNQLSSLMWVDEKAGEFSSRIQKLANRGPTANQDVMGSRLWMS 136
           ILNNQLSSLMW+DEKA EFSSRIQKLA +G  A++++MG + WMS
Sbjct: 767 ILNNQLSSLMWIDEKAEEFSSRIQKLATQGSAADRELMGPKFWMS 811


>ref|XP_004164977.1| PREDICTED: nucleoporin nsp1-like [Cucumis sativus]
          Length = 757

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 33/46 (71%), Positives = 40/46 (86%), Gaps = 1/46 (2%)
 Frame = +2

Query: 2   ILNNQLSSLMWVDEKAGEFSSRIQKL-ANRGPTANQDVMGSRLWMS 136
           ILNNQLSSLMW+DEKA EFSSRIQKL A  GP A+++++G +LWMS
Sbjct: 712 ILNNQLSSLMWIDEKAEEFSSRIQKLAATEGPAADRELLGQKLWMS 757


>ref|XP_004140612.1| PREDICTED: LOW QUALITY PROTEIN: nucleoporin nsp1-like [Cucumis
           sativus]
          Length = 755

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 33/46 (71%), Positives = 40/46 (86%), Gaps = 1/46 (2%)
 Frame = +2

Query: 2   ILNNQLSSLMWVDEKAGEFSSRIQKL-ANRGPTANQDVMGSRLWMS 136
           ILNNQLSSLMW+DEKA EFSSRIQKL A  GP A+++++G +LWMS
Sbjct: 710 ILNNQLSSLMWIDEKAEEFSSRIQKLAATEGPAADRELLGQKLWMS 755


>ref|XP_003517940.1| PREDICTED: uncharacterized protein LOC100803385 [Glycine max]
          Length = 731

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 31/45 (68%), Positives = 39/45 (86%)
 Frame = +2

Query: 2   ILNNQLSSLMWVDEKAGEFSSRIQKLANRGPTANQDVMGSRLWMS 136
           ILNNQL+SLMW+DEKA EFSSRIQKLAN G  +++++ GS +WMS
Sbjct: 687 ILNNQLTSLMWIDEKAEEFSSRIQKLANPGSASDRELTGSGIWMS 731


>emb|CBI16624.3| unnamed protein product [Vitis vinifera]
          Length = 808

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 31/45 (68%), Positives = 37/45 (82%)
 Frame = +2

Query: 2   ILNNQLSSLMWVDEKAGEFSSRIQKLANRGPTANQDVMGSRLWMS 136
           ILNNQLSSLMW+DEKA EF+SRIQKLA++G T+    MG + WMS
Sbjct: 764 ILNNQLSSLMWIDEKAQEFNSRIQKLASQGSTSEHGSMGPKFWMS 808