BLASTX nr result
ID: Coptis25_contig00028187
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00028187
(500 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003616288.1| ATP-dependent DNA helicase PIF1 [Medicago tr... 85 2e-17
gb|EEC68598.1| hypothetical protein OsI_36954 [Oryza sativa Indi... 92 3e-17
ref|XP_003605521.1| Helicase-like protein [Medicago truncatula] ... 83 6e-17
ref|XP_003094696.1| hypothetical protein CRE_27833 [Caenorhabdit... 90 2e-16
ref|XP_003520409.1| PREDICTED: uncharacterized protein LOC100775... 84 6e-16
>ref|XP_003616288.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
gi|355517623|gb|AES99246.1| ATP-dependent DNA helicase
PIF1 [Medicago truncatula]
Length = 1567
Score = 84.7 bits (208), Expect(2) = 2e-17
Identities = 55/158 (34%), Positives = 82/158 (51%), Gaps = 13/158 (8%)
Frame = -2
Query: 436 LQRVLDEHNPFVHTLRRIS----QSENIQDIRLLLKEKPCERHHYTLPTSSQVAAILVGG 269
L ++DEHN V + R + Q++N+ L + + + Y +P ++AA++VG
Sbjct: 320 LLSLMDEHNKLVKSFRMVRDFCVQNDNVPVRLRLFRNRNFDARTYNVPDVDEIAALIVGD 379
Query: 268 DDPAEMGERDIVVETVTGDFLNVPDTAGFYDPLQYPLLHPYGNFGWDLHIFSDDAR---- 101
+ +E G RDIVV+ G + +T Y PLQYPLL P+G + HI ++
Sbjct: 380 FEDSEDG-RDIVVKEKGGFLQRIHETHSKYIPLQYPLLFPFGEDQYQEHIERNELTSTGS 438
Query: 100 -----RITCREFYCYMLQIRSDYDSPLFRAGRLLQQFV 2
RI+ REF Y LQ R+ DS LF RL QQF+
Sbjct: 439 VKKRIRISVREFVAYRLQERTIEDSVLFSGKRLFQQFI 476
Score = 28.9 bits (63), Expect(2) = 2e-17
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -3
Query: 495 YHKIGGLLPQVGQRPRF 445
YH+IG LLP G+RP+F
Sbjct: 268 YHRIGCLLPADGERPKF 284
>gb|EEC68598.1| hypothetical protein OsI_36954 [Oryza sativa Indica Group]
Length = 909
Score = 92.4 bits (228), Expect = 3e-17
Identities = 58/172 (33%), Positives = 79/172 (45%), Gaps = 33/172 (19%)
Frame = -2
Query: 418 EHNPFVHTLRRISQSENIQDIRLLLKEK-PCERHHYTLPTSSQVAAILVGGDDPAEMGER 242
EHNP+VHT R++ N+ D R+ L ++ Y PT+SQVAAI + G+DP +R
Sbjct: 411 EHNPYVHTFRQMGSVPNLDDYRISLNTNIVLDQRVYNAPTASQVAAIWIDGNDPRNQFDR 470
Query: 241 DIVVETVTGDFLNVPDTAGFYDPLQYPLLHPYGNFGW----------------DLHIFSD 110
++V + G YDPL YPL P G GW D++ +
Sbjct: 471 SVIVFGRENHPHYIKPYHGNYDPLSYPLFFPGGEVGWNWGIPYDQEPLNEHPFDVYQIDE 530
Query: 109 DA----------------RRITCREFYCYMLQIRSDYDSPLFRAGRLLQQFV 2
DA + +T RE+YCY LQI + LF GRL QQ V
Sbjct: 531 DAMDLEGDEDGVVEKHNGKYVTAREYYCYKLQICPGIFNVLFYGGRLFQQIV 582
>ref|XP_003605521.1| Helicase-like protein [Medicago truncatula]
gi|355506576|gb|AES87718.1| Helicase-like protein
[Medicago truncatula]
Length = 1262
Score = 82.8 bits (203), Expect(2) = 6e-17
Identities = 56/157 (35%), Positives = 87/157 (55%), Gaps = 12/157 (7%)
Frame = -2
Query: 436 LQRVLDEHNPFVHTLRRISQS---ENIQDIRL-LLKEKPCERHHYTLPTSSQVAAILVGG 269
L+ +LD N FV + R + + +N I+L +L ++ + Y LPT+S+VAA++VG
Sbjct: 337 LRHILDNSNSFVKSYRMVRDTLLEDNAPQIKLRILGKRGYDGRRYNLPTASEVAALVVGD 396
Query: 268 DDPAEMGERDIVVETVTGDFLNVPDTAGFYDPLQYPLLHPYGNFGWDLHI-FSDDARR-- 98
D A+ ERD+VVE +G + Y PLQYPL+ P G G+ I F+D ++
Sbjct: 397 YDAADF-ERDVVVEERSGLLKRISVFETSYLPLQYPLIFPRGEDGFRRDIRFTDRPKKKP 455
Query: 97 -----ITCREFYCYMLQIRSDYDSPLFRAGRLLQQFV 2
++ +E++ Y +Q R Y S L A RL QQF+
Sbjct: 456 IKRIFVSMKEWFAYKIQQRDIYQSHLLYARRLFQQFL 492
Score = 29.3 bits (64), Expect(2) = 6e-17
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -3
Query: 495 YHKIGGLLPQVGQRPRF 445
YH+IG LLP+ G +PRF
Sbjct: 285 YHQIGSLLPKHGDQPRF 301
>ref|XP_003094696.1| hypothetical protein CRE_27833 [Caenorhabditis remanei]
gi|308247028|gb|EFO90980.1| hypothetical protein
CRE_27833 [Caenorhabditis remanei]
Length = 1261
Score = 89.7 bits (221), Expect = 2e-16
Identities = 57/162 (35%), Positives = 87/162 (53%), Gaps = 18/162 (11%)
Frame = -2
Query: 436 LQRVLDEHNPFVHTLRRI------------SQSENIQDIRLLLKE-KPCERHHYTLPTSS 296
L +L+++NPFV +L+ + SQ+ +QDIR++ +E K H Y LPT++
Sbjct: 302 LIEILNKYNPFVKSLKMMKEMEEEEETLARSQNREVQDIRMVFREGKKFNPHRYQLPTAN 361
Query: 295 QVAAILVGGDDPAEMGERDIVVETVTGDFLNVPDTAGFYDPLQYPLLHPYGNFGWDLHIF 116
+VA + VG +D G R+I V +G N+ DT DPL YPLL G +GW +
Sbjct: 362 EVAVVFVGDEDEIP-GRREITVYQRSGKLQNLRDTDKETDPLCYPLLFIDGRYGWHIDCK 420
Query: 115 SDDAR-----RITCREFYCYMLQIRSDYDSPLFRAGRLLQQF 5
+ +++ REFY Y L +R + +PL A +L QQF
Sbjct: 421 RKKEQDGGEVKMSTREFYAYYLHVRPSF-NPLHYAKKLFQQF 461
>ref|XP_003520409.1| PREDICTED: uncharacterized protein LOC100775782 [Glycine max]
Length = 1412
Score = 83.6 bits (205), Expect(2) = 6e-16
Identities = 56/159 (35%), Positives = 81/159 (50%), Gaps = 14/159 (8%)
Frame = -2
Query: 436 LQRVLDEHNPFVHTLRRISQSENIQDIRL------LLKEKPCERHHYTLPTSSQVAAILV 275
L +LDE+N T R + +QD+++ L+ + Y +PT +VAA++V
Sbjct: 517 LSEMLDEYNVHAKTFRMAR--DRLQDVQVNNIKFKLIANREKHGRTYNVPTVPEVAALIV 574
Query: 274 GGDDPAEMGERDIVVETVTGDFLNVPDTAGFYDPLQYPLLHPYGNFGWD---LHIFSDDA 104
G D +RDI++ET G + + Y PLQYPLL PYG G+ LH D
Sbjct: 575 GDFDANS--KRDIIIETQHGQLQRIHELHSSYLPLQYPLLFPYGENGYRPDILHSSRSDG 632
Query: 103 R-----RITCREFYCYMLQIRSDYDSPLFRAGRLLQQFV 2
+ R+T RE++ Y LQ RS+ L + RL QQFV
Sbjct: 633 KKRKRNRLTMREWFSYRLQCRSNESMTLLNSRRLFQQFV 671
Score = 25.0 bits (53), Expect(2) = 6e-16
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -3
Query: 492 HKIGGLLPQVGQRPRF 445
H+IG +LP G+ P+F
Sbjct: 468 HRIGSMLPMPGKEPKF 483