BLASTX nr result

ID: Coptis25_contig00028179 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028179
         (879 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267127.2| PREDICTED: expansin-B3-like [Vitis vinifera]...   281   1e-73
ref|XP_002517939.1| Beta-expansin 3 precursor, putative [Ricinus...   278   9e-73
ref|XP_002329415.1| hypothetical protein POPTRDRAFT_836962 [Popu...   273   3e-71
gb|AAZ08314.1| putative beta-expansin [Eucalyptus globulus]           271   1e-70
ref|XP_002319359.1| hypothetical protein POPTRDRAFT_243090 [Popu...   271   1e-70

>ref|XP_002267127.2| PREDICTED: expansin-B3-like [Vitis vinifera]
           gi|297739116|emb|CBI28767.3| unnamed protein product
           [Vitis vinifera]
          Length = 259

 Score =  281 bits (720), Expect = 1e-73
 Identities = 126/158 (79%), Positives = 142/158 (89%)
 Frame = +2

Query: 2   TVIITDECPGGYCSSGRTHFDLSGAAFGRMAVSGNSGQLRNRGEISVIFRRTPCKYPGKN 181
           T+I+TDECPGGYCS GRTHFDLSGAAFGRMAV+GN+ QLR+RGEISVIFRRTPCKYPGKN
Sbjct: 102 TIIVTDECPGGYCSGGRTHFDLSGAAFGRMAVAGNNNQLRDRGEISVIFRRTPCKYPGKN 161

Query: 182 VAFHVNEGSTEYWLSLLVEYEDGDGDIGSMHIKPASSTEWLEMKHLWGANWCIIGGPLQG 361
           +AFHVNEGST+YWLSLLVE+EDGDGD+GSMHI+ ASSTEWLEM+H+WGA+WCI GGPL+G
Sbjct: 162 IAFHVNEGSTDYWLSLLVEFEDGDGDVGSMHIREASSTEWLEMRHVWGASWCITGGPLKG 221

Query: 362 PFSVKXXXXXXXXXXXARGVIPRNWSPKATYTSRLNFY 475
           PFSVK           AR VIPRNW+PKATYTSRLNF+
Sbjct: 222 PFSVKLTTLSTGRTLSAREVIPRNWAPKATYTSRLNFF 259


>ref|XP_002517939.1| Beta-expansin 3 precursor, putative [Ricinus communis]
           gi|223542921|gb|EEF44457.1| Beta-expansin 3 precursor,
           putative [Ricinus communis]
          Length = 259

 Score =  278 bits (712), Expect = 9e-73
 Identities = 124/158 (78%), Positives = 137/158 (86%)
 Frame = +2

Query: 2   TVIITDECPGGYCSSGRTHFDLSGAAFGRMAVSGNSGQLRNRGEISVIFRRTPCKYPGKN 181
           T+I+TDECPGGYCS+GRTHFDLSGAAFGRMA++G SGQLRNRGE+ V +RRTPCKYPGKN
Sbjct: 100 TIIVTDECPGGYCSNGRTHFDLSGAAFGRMAITGESGQLRNRGELPVTYRRTPCKYPGKN 159

Query: 182 VAFHVNEGSTEYWLSLLVEYEDGDGDIGSMHIKPASSTEWLEMKHLWGANWCIIGGPLQG 361
           +AFHVNEGST YWLSLLVE+EDGDGD+GSMHI+ A  +EWLEM HLWGANWCIIGGPL+G
Sbjct: 160 IAFHVNEGSTNYWLSLLVEFEDGDGDVGSMHIREAGGSEWLEMNHLWGANWCIIGGPLKG 219

Query: 362 PFSVKXXXXXXXXXXXARGVIPRNWSPKATYTSRLNFY 475
           PFSVK           AR VIPRNWSPKATYTSRL FY
Sbjct: 220 PFSVKLTTLSTGRGLSARDVIPRNWSPKATYTSRLKFY 257


>ref|XP_002329415.1| hypothetical protein POPTRDRAFT_836962 [Populus trichocarpa]
           gi|222870465|gb|EEF07596.1| hypothetical protein
           POPTRDRAFT_836962 [Populus trichocarpa]
          Length = 267

 Score =  273 bits (699), Expect = 3e-71
 Identities = 121/158 (76%), Positives = 137/158 (86%)
 Frame = +2

Query: 2   TVIITDECPGGYCSSGRTHFDLSGAAFGRMAVSGNSGQLRNRGEISVIFRRTPCKYPGKN 181
           T+I+TDECPGGYCS+G THFDLSGAAFGRMA+SG +GQLRNRGEI VI+RRTPCKYPGKN
Sbjct: 109 TIIVTDECPGGYCSNGNTHFDLSGAAFGRMAISGENGQLRNRGEIPVIYRRTPCKYPGKN 168

Query: 182 VAFHVNEGSTEYWLSLLVEYEDGDGDIGSMHIKPASSTEWLEMKHLWGANWCIIGGPLQG 361
           +AFHVNEGST+YWLS+LVE+EDGDGD+GSMHI+ A  TEWLEM H+WGA WCII GPL+G
Sbjct: 169 IAFHVNEGSTDYWLSILVEFEDGDGDVGSMHIREAGGTEWLEMNHVWGATWCIIRGPLKG 228

Query: 362 PFSVKXXXXXXXXXXXARGVIPRNWSPKATYTSRLNFY 475
           PFSVK           AR VIPRNW+PKATYTSRLNF+
Sbjct: 229 PFSVKLTTLTTGRTLSAREVIPRNWAPKATYTSRLNFF 266


>gb|AAZ08314.1| putative beta-expansin [Eucalyptus globulus]
          Length = 207

 Score =  271 bits (694), Expect = 1e-70
 Identities = 121/158 (76%), Positives = 136/158 (86%)
 Frame = +2

Query: 2   TVIITDECPGGYCSSGRTHFDLSGAAFGRMAVSGNSGQLRNRGEISVIFRRTPCKYPGKN 181
           T+I+TDECPGGYCS G THFDLSGAAFGRMA++G +G LRNRG + V +RRTPCKYPGKN
Sbjct: 50  TIIVTDECPGGYCSGGNTHFDLSGAAFGRMAIAGEAGPLRNRGVLPVQYRRTPCKYPGKN 109

Query: 182 VAFHVNEGSTEYWLSLLVEYEDGDGDIGSMHIKPASSTEWLEMKHLWGANWCIIGGPLQG 361
           +AFHVN GST+YWLSLLVE+EDGDGD+GSMHI+PASS+EW+EMKHLWGANWCIIGGPLQG
Sbjct: 110 IAFHVNGGSTDYWLSLLVEFEDGDGDVGSMHIRPASSSEWIEMKHLWGANWCIIGGPLQG 169

Query: 362 PFSVKXXXXXXXXXXXARGVIPRNWSPKATYTSRLNFY 475
           PFSVK           AR VIP  WSPKATYTSRLNF+
Sbjct: 170 PFSVKLTSLSTNRTLSAREVIPGKWSPKATYTSRLNFF 207


>ref|XP_002319359.1| hypothetical protein POPTRDRAFT_243090 [Populus trichocarpa]
           gi|222857735|gb|EEE95282.1| hypothetical protein
           POPTRDRAFT_243090 [Populus trichocarpa]
          Length = 237

 Score =  271 bits (693), Expect = 1e-70
 Identities = 121/157 (77%), Positives = 134/157 (85%)
 Frame = +2

Query: 2   TVIITDECPGGYCSSGRTHFDLSGAAFGRMAVSGNSGQLRNRGEISVIFRRTPCKYPGKN 181
           T+I+TDECPGGYCS+G THFDLSGAAFG MA+SG +GQLRNRGEI VI+RRTPCKYPGKN
Sbjct: 81  TIIVTDECPGGYCSNGNTHFDLSGAAFGHMAISGENGQLRNRGEIPVIYRRTPCKYPGKN 140

Query: 182 VAFHVNEGSTEYWLSLLVEYEDGDGDIGSMHIKPASSTEWLEMKHLWGANWCIIGGPLQG 361
           +AFHVNEGST+YWLSLLVE+EDGDGD+GSMHI+ A  TEWLEM HLWGANWC+I GPL+G
Sbjct: 141 IAFHVNEGSTDYWLSLLVEFEDGDGDVGSMHIREAGGTEWLEMNHLWGANWCVIRGPLKG 200

Query: 362 PFSVKXXXXXXXXXXXARGVIPRNWSPKATYTSRLNF 472
           P SVK           AR VIPRNW PKATYTSRLNF
Sbjct: 201 PLSVKLTTLSTGRTLSARDVIPRNWVPKATYTSRLNF 237


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