BLASTX nr result

ID: Coptis25_contig00028161 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028161
         (894 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302337.1| predicted protein [Populus trichocarpa] gi|2...   222   8e-56
ref|XP_004148419.1| PREDICTED: universal stress protein A-like p...   220   4e-55
gb|AAD46412.1|AF096262_1 ER6 protein [Solanum lycopersicum]           218   1e-54
ref|XP_002514027.1| conserved hypothetical protein [Ricinus comm...   217   3e-54
gb|AAB60745.1| ESTs gb|ATTS1236,gb|T43334,gb|N97019,gb|AA395203 ...   216   4e-54

>ref|XP_002302337.1| predicted protein [Populus trichocarpa] gi|222844063|gb|EEE81610.1|
           predicted protein [Populus trichocarpa]
          Length = 173

 Score =  222 bits (566), Expect = 8e-56
 Identities = 117/169 (69%), Positives = 132/169 (78%), Gaps = 1/169 (0%)
 Frame = -3

Query: 775 MTEKLKCVVVAVNSSEESMNALNWALHNLKLHSSDSDEGE-PSALVILHVQPSPSIFAGV 599
           M+  L CV+VAV+ SEESMNAL  AL NLKL S   D  E P + VILHVQP PSI AG+
Sbjct: 1   MSANLGCVIVAVDGSEESMNALRHALDNLKLRSPAPDSTETPGSFVILHVQPPPSIAAGL 60

Query: 598 SPAPIPFIGPSDPEVPAFAAAIEAHQKRISEAIIAHALEICSEEKPQMNVKTQVVVGDPK 419
           +P  IPF GPS  EVPAF AAIEAHQ+RI+EAI+ HALEIC E+K  +NVKTQVV+GDPK
Sbjct: 61  NPGAIPFGGPSGLEVPAFTAAIEAHQRRITEAILEHALEICREKK--VNVKTQVVIGDPK 118

Query: 418 EVICEVVYKLNADLLVMGSHSYGPILRMFLGSVSNYCTNQAHCPVVVVK 272
           E ICEV   L ADLLVMG  S+GPI RMFLGSVSNYCTNQA CPV++VK
Sbjct: 119 EKICEVAENLPADLLVMGCRSFGPIKRMFLGSVSNYCTNQAQCPVIIVK 167


>ref|XP_004148419.1| PREDICTED: universal stress protein A-like protein-like [Cucumis
           sativus] gi|449518061|ref|XP_004166062.1| PREDICTED:
           universal stress protein A-like protein-like [Cucumis
           sativus]
          Length = 175

 Score =  220 bits (560), Expect = 4e-55
 Identities = 111/169 (65%), Positives = 132/169 (78%)
 Frame = -3

Query: 775 MTEKLKCVVVAVNSSEESMNALNWALHNLKLHSSDSDEGEPSALVILHVQPSPSIFAGVS 596
           M+  L+CV+VAV+ S+ESM AL WAL NLKLHSS  D  +    V LHVQP PSI AG+S
Sbjct: 1   MSSDLRCVIVAVDGSDESMGALRWALQNLKLHSSSPDSTD-GTFVALHVQPPPSIAAGLS 59

Query: 595 PAPIPFIGPSDPEVPAFAAAIEAHQKRISEAIIAHALEICSEEKPQMNVKTQVVVGDPKE 416
           P PIPF GPSD EVPAF AAIE+HQ+RI+ AI+ HA +ICSE   Q+ V+T+VV+GDPKE
Sbjct: 60  PDPIPFGGPSDLEVPAFTAAIESHQRRITAAILEHASKICSEY--QVKVETKVVIGDPKE 117

Query: 415 VICEVVYKLNADLLVMGSHSYGPILRMFLGSVSNYCTNQAHCPVVVVKD 269
            ICEV   L+ADLLVMGS ++GPI RMFLGSVSNYCTN   CPV++VKD
Sbjct: 118 KICEVAEHLHADLLVMGSRAFGPIKRMFLGSVSNYCTNHVECPVIIVKD 166


>gb|AAD46412.1|AF096262_1 ER6 protein [Solanum lycopersicum]
          Length = 168

 Score =  218 bits (556), Expect = 1e-54
 Identities = 110/166 (66%), Positives = 130/166 (78%), Gaps = 1/166 (0%)
 Frame = -3

Query: 766 KLKCVVVAVNSSEESMNALNWALHNLKLHSSDSDEGEPSA-LVILHVQPSPSIFAGVSPA 590
           +L CV+V+V+ SEESMNALNW L N+KL   D D  E    +VILHVQ  PSI AG++P 
Sbjct: 2   RLNCVIVSVDGSEESMNALNWTLDNIKLKPHDPDSPESQGFIVILHVQSPPSIAAGLNPG 61

Query: 589 PIPFIGPSDPEVPAFAAAIEAHQKRISEAIIAHALEICSEEKPQMNVKTQVVVGDPKEVI 410
            IPF GPSD EVPAF AAIEAHQKRI++AI+ HAL IC+  K   NVKTQVV+GDPKE I
Sbjct: 62  AIPFGGPSDVEVPAFTAAIEAHQKRITQAILDHALGICA--KKNANVKTQVVIGDPKEKI 119

Query: 409 CEVVYKLNADLLVMGSHSYGPILRMFLGSVSNYCTNQAHCPVVVVK 272
           C+ V ++NADLLVMGS ++GPI RMFLGSVSNYCTN A CPV++VK
Sbjct: 120 CDAVEEMNADLLVMGSRAFGPIKRMFLGSVSNYCTNHAQCPVIIVK 165


>ref|XP_002514027.1| conserved hypothetical protein [Ricinus communis]
           gi|223547113|gb|EEF48610.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 176

 Score =  217 bits (552), Expect = 3e-54
 Identities = 108/170 (63%), Positives = 130/170 (76%), Gaps = 2/170 (1%)
 Frame = -3

Query: 775 MTEKLKCVVVAVNSSEESMNALNWALHNLKLHSS--DSDEGEPSALVILHVQPSPSIFAG 602
           MT  L  V+VAV+ SEESM AL WA+ NLKL S   DS E  P +  ILHVQ  P+I  G
Sbjct: 1   MTANLGLVIVAVDGSEESMYALRWAIENLKLRSPAPDSTETPPGSFFILHVQSPPTIATG 60

Query: 601 VSPAPIPFIGPSDPEVPAFAAAIEAHQKRISEAIIAHALEICSEEKPQMNVKTQVVVGDP 422
           ++P  IPF GPSD EVPAF AAIEAHQ+RI+EA++ HAL+IC ++  + NVKTQVV+GDP
Sbjct: 61  LNPGAIPFGGPSDLEVPAFTAAIEAHQRRITEAVLEHALDICRQKNVEANVKTQVVIGDP 120

Query: 421 KEVICEVVYKLNADLLVMGSHSYGPILRMFLGSVSNYCTNQAHCPVVVVK 272
           KE ICEV  K++ADLLVMG  ++GPI RMFLGSVSNYCTN A CPV++VK
Sbjct: 121 KEKICEVAEKMHADLLVMGCRAFGPIKRMFLGSVSNYCTNHAECPVIIVK 170


>gb|AAB60745.1| ESTs gb|ATTS1236,gb|T43334,gb|N97019,gb|AA395203 come from this
           gene [Arabidopsis thaliana]
          Length = 174

 Score =  216 bits (551), Expect = 4e-54
 Identities = 112/165 (67%), Positives = 129/165 (78%), Gaps = 1/165 (0%)
 Frame = -3

Query: 763 LKCVVVAVNSSEESMNALNWALHNLKLHSSDSDEGEPSALVILHVQPSPSIFAGVSPAPI 584
           L CVVVAV+ SE SM AL WAL NLKL SS SD    S+ V+LHVQPSPS+ AGVSP  I
Sbjct: 7   LNCVVVAVDGSEVSMEALRWALDNLKLSSSSSD----SSFVVLHVQPSPSVAAGVSPGTI 62

Query: 583 PFIGPSDPEVPAFAAAIEAHQKRISEAIIAHALEICSEEK-PQMNVKTQVVVGDPKEVIC 407
           PF GPS  EVPAF AAIE HQKRI++ I+ HA +IC+E+   ++NVKTQVV+GDPK  IC
Sbjct: 63  PFGGPSGLEVPAFTAAIEQHQKRITDTILEHASQICAEKSVSRVNVKTQVVIGDPKYKIC 122

Query: 406 EVVYKLNADLLVMGSHSYGPILRMFLGSVSNYCTNQAHCPVVVVK 272
           E V  L+ADLLVMGS +YG I RMFLGSVSNYCTN AHCPVV++K
Sbjct: 123 EAVENLHADLLVMGSRAYGRIKRMFLGSVSNYCTNHAHCPVVIIK 167


Top