BLASTX nr result
ID: Coptis25_contig00028160
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00028160 (569 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002285725.2| PREDICTED: protein TRANSPARENT TESTA 12-like... 88 9e-16 emb|CAN67847.1| hypothetical protein VITISV_025689 [Vitis vinifera] 88 9e-16 ref|XP_002306557.1| predicted protein [Populus trichocarpa] gi|2... 87 2e-15 ref|XP_002460370.1| hypothetical protein SORBIDRAFT_02g027130 [S... 84 2e-14 ref|NP_001147862.1| LOC100281472 [Zea mays] gi|195614188|gb|ACG2... 84 2e-14 >ref|XP_002285725.2| PREDICTED: protein TRANSPARENT TESTA 12-like [Vitis vinifera] gi|302142015|emb|CBI19218.3| unnamed protein product [Vitis vinifera] Length = 484 Score = 88.2 bits (217), Expect = 9e-16 Identities = 36/66 (54%), Positives = 49/66 (74%) Frame = -2 Query: 568 VGSGWQALAAIINIGSYYIIGVPLGVLTGWVFHFGIQGMWSGMISGXXXXXXXXXXXXLK 389 VG GWQA+ A INIGSYY++GVPLG+L GW+FHFGI+G+W+GM+SG ++ Sbjct: 402 VGYGWQAIVAFINIGSYYMVGVPLGILLGWLFHFGIKGIWTGMLSGTLVQTLFLAIMTVR 461 Query: 388 FDWKKK 371 DW+K+ Sbjct: 462 CDWEKQ 467 >emb|CAN67847.1| hypothetical protein VITISV_025689 [Vitis vinifera] Length = 528 Score = 88.2 bits (217), Expect = 9e-16 Identities = 37/66 (56%), Positives = 50/66 (75%) Frame = -2 Query: 568 VGSGWQALAAIINIGSYYIIGVPLGVLTGWVFHFGIQGMWSGMISGXXXXXXXXXXXXLK 389 VG GWQA+ A INIGSYY++GVPLG+L GW+FHFGI+G+W+GM+SG ++ Sbjct: 446 VGYGWQAIVAFINIGSYYMVGVPLGILLGWLFHFGIKGIWTGMLSGTLVQTLXLAIMTVR 505 Query: 388 FDWKKK 371 DW+K+ Sbjct: 506 CDWEKQ 511 >ref|XP_002306557.1| predicted protein [Populus trichocarpa] gi|222856006|gb|EEE93553.1| predicted protein [Populus trichocarpa] Length = 475 Score = 86.7 bits (213), Expect = 2e-15 Identities = 37/66 (56%), Positives = 47/66 (71%) Frame = -2 Query: 568 VGSGWQALAAIINIGSYYIIGVPLGVLTGWVFHFGIQGMWSGMISGXXXXXXXXXXXXLK 389 +GSGWQAL A INIGSYYI+GVPLG L GW+ HFGI+G+W+GMI G +K Sbjct: 409 IGSGWQALVAYINIGSYYIVGVPLGFLLGWLLHFGIKGLWAGMICGTVVQTLVLSVVTMK 468 Query: 388 FDWKKK 371 +W+K+ Sbjct: 469 CEWEKE 474 >ref|XP_002460370.1| hypothetical protein SORBIDRAFT_02g027130 [Sorghum bicolor] gi|241923747|gb|EER96891.1| hypothetical protein SORBIDRAFT_02g027130 [Sorghum bicolor] Length = 486 Score = 84.0 bits (206), Expect = 2e-14 Identities = 36/66 (54%), Positives = 46/66 (69%) Frame = -2 Query: 568 VGSGWQALAAIINIGSYYIIGVPLGVLTGWVFHFGIQGMWSGMISGXXXXXXXXXXXXLK 389 +GSGWQAL A +N+GSYY IGVPLGVL GW F++G+ G+W+GMISG L+ Sbjct: 406 IGSGWQALVAYVNVGSYYFIGVPLGVLLGWRFNYGVPGIWAGMISGTTMQTLILAVITLR 465 Query: 388 FDWKKK 371 DW K+ Sbjct: 466 CDWNKE 471 >ref|NP_001147862.1| LOC100281472 [Zea mays] gi|195614188|gb|ACG28924.1| transparent testa 12 protein [Zea mays] Length = 483 Score = 84.0 bits (206), Expect = 2e-14 Identities = 35/66 (53%), Positives = 44/66 (66%) Frame = -2 Query: 568 VGSGWQALAAIINIGSYYIIGVPLGVLTGWVFHFGIQGMWSGMISGXXXXXXXXXXXXLK 389 VGSGWQAL A +N+GSYY+IGVPLG++ GW HFG+ G+WSGMI G K Sbjct: 402 VGSGWQALVAYVNVGSYYLIGVPLGIVLGWPLHFGVGGIWSGMIGGTAVQTLILAYLTAK 461 Query: 388 FDWKKK 371 DW ++ Sbjct: 462 CDWHEE 467