BLASTX nr result

ID: Coptis25_contig00028160 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028160
         (569 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285725.2| PREDICTED: protein TRANSPARENT TESTA 12-like...    88   9e-16
emb|CAN67847.1| hypothetical protein VITISV_025689 [Vitis vinifera]    88   9e-16
ref|XP_002306557.1| predicted protein [Populus trichocarpa] gi|2...    87   2e-15
ref|XP_002460370.1| hypothetical protein SORBIDRAFT_02g027130 [S...    84   2e-14
ref|NP_001147862.1| LOC100281472 [Zea mays] gi|195614188|gb|ACG2...    84   2e-14

>ref|XP_002285725.2| PREDICTED: protein TRANSPARENT TESTA 12-like [Vitis vinifera]
           gi|302142015|emb|CBI19218.3| unnamed protein product
           [Vitis vinifera]
          Length = 484

 Score = 88.2 bits (217), Expect = 9e-16
 Identities = 36/66 (54%), Positives = 49/66 (74%)
 Frame = -2

Query: 568 VGSGWQALAAIINIGSYYIIGVPLGVLTGWVFHFGIQGMWSGMISGXXXXXXXXXXXXLK 389
           VG GWQA+ A INIGSYY++GVPLG+L GW+FHFGI+G+W+GM+SG            ++
Sbjct: 402 VGYGWQAIVAFINIGSYYMVGVPLGILLGWLFHFGIKGIWTGMLSGTLVQTLFLAIMTVR 461

Query: 388 FDWKKK 371
            DW+K+
Sbjct: 462 CDWEKQ 467


>emb|CAN67847.1| hypothetical protein VITISV_025689 [Vitis vinifera]
          Length = 528

 Score = 88.2 bits (217), Expect = 9e-16
 Identities = 37/66 (56%), Positives = 50/66 (75%)
 Frame = -2

Query: 568 VGSGWQALAAIINIGSYYIIGVPLGVLTGWVFHFGIQGMWSGMISGXXXXXXXXXXXXLK 389
           VG GWQA+ A INIGSYY++GVPLG+L GW+FHFGI+G+W+GM+SG            ++
Sbjct: 446 VGYGWQAIVAFINIGSYYMVGVPLGILLGWLFHFGIKGIWTGMLSGTLVQTLXLAIMTVR 505

Query: 388 FDWKKK 371
            DW+K+
Sbjct: 506 CDWEKQ 511


>ref|XP_002306557.1| predicted protein [Populus trichocarpa] gi|222856006|gb|EEE93553.1|
           predicted protein [Populus trichocarpa]
          Length = 475

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 37/66 (56%), Positives = 47/66 (71%)
 Frame = -2

Query: 568 VGSGWQALAAIINIGSYYIIGVPLGVLTGWVFHFGIQGMWSGMISGXXXXXXXXXXXXLK 389
           +GSGWQAL A INIGSYYI+GVPLG L GW+ HFGI+G+W+GMI G            +K
Sbjct: 409 IGSGWQALVAYINIGSYYIVGVPLGFLLGWLLHFGIKGLWAGMICGTVVQTLVLSVVTMK 468

Query: 388 FDWKKK 371
            +W+K+
Sbjct: 469 CEWEKE 474


>ref|XP_002460370.1| hypothetical protein SORBIDRAFT_02g027130 [Sorghum bicolor]
           gi|241923747|gb|EER96891.1| hypothetical protein
           SORBIDRAFT_02g027130 [Sorghum bicolor]
          Length = 486

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 36/66 (54%), Positives = 46/66 (69%)
 Frame = -2

Query: 568 VGSGWQALAAIINIGSYYIIGVPLGVLTGWVFHFGIQGMWSGMISGXXXXXXXXXXXXLK 389
           +GSGWQAL A +N+GSYY IGVPLGVL GW F++G+ G+W+GMISG            L+
Sbjct: 406 IGSGWQALVAYVNVGSYYFIGVPLGVLLGWRFNYGVPGIWAGMISGTTMQTLILAVITLR 465

Query: 388 FDWKKK 371
            DW K+
Sbjct: 466 CDWNKE 471


>ref|NP_001147862.1| LOC100281472 [Zea mays] gi|195614188|gb|ACG28924.1| transparent
           testa 12 protein [Zea mays]
          Length = 483

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 35/66 (53%), Positives = 44/66 (66%)
 Frame = -2

Query: 568 VGSGWQALAAIINIGSYYIIGVPLGVLTGWVFHFGIQGMWSGMISGXXXXXXXXXXXXLK 389
           VGSGWQAL A +N+GSYY+IGVPLG++ GW  HFG+ G+WSGMI G             K
Sbjct: 402 VGSGWQALVAYVNVGSYYLIGVPLGIVLGWPLHFGVGGIWSGMIGGTAVQTLILAYLTAK 461

Query: 388 FDWKKK 371
            DW ++
Sbjct: 462 CDWHEE 467


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