BLASTX nr result

ID: Coptis25_contig00028158 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028158
         (522 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004152583.1| PREDICTED: probable Ufm1-specific protease-l...   140   1e-31
ref|XP_004169634.1| PREDICTED: LOW QUALITY PROTEIN: probable Ufm...   138   4e-31
emb|CBI14895.3| unnamed protein product [Vitis vinifera]              137   1e-30
emb|CAN74983.1| hypothetical protein VITISV_002653 [Vitis vinifera]   137   1e-30
ref|XP_002511273.1| conserved hypothetical protein [Ricinus comm...   136   2e-30

>ref|XP_004152583.1| PREDICTED: probable Ufm1-specific protease-like [Cucumis sativus]
          Length = 647

 Score =  140 bits (352), Expect = 1e-31
 Identities = 77/187 (41%), Positives = 112/187 (59%), Gaps = 14/187 (7%)
 Frame = +2

Query: 2   VIGASADLTSGEIQYFDS-----TRMDPISSVVYEDSSPENYIWERGCLLRCGLDVKIPI 166
           +IGA AD+ S +I +F S     T +D +SSVVYE++ PE YIWERGCLLRC L + +P+
Sbjct: 116 LIGAVADINSADIHFFVSQSENDTSLDSVSSVVYENN-PEKYIWERGCLLRCELPISMPL 174

Query: 167 CFPVHNPADSERVFSSGVDDTIVKLRDPNVVFMIE----GAQETNGTVIVRGAKLNFQKD 334
             P+ +P+D E+ +    +  I KLRDP  V+++E       E    VI+RG++++FQ +
Sbjct: 175 YIPLDSPSDVEKAYEQATESVISKLRDPQAVYVVEQVNKNTSEDPCPVILRGSQMDFQIN 234

Query: 335 VSSYAILCENTSEDRGNSLFCSAFCSKNKP-----SRESADPIQVSIFFNKSGNPPNCSA 499
           +S +  L + +    G SL C+ FCSK+K      S ++AD IQVS+  N S      SA
Sbjct: 235 LSKFRHLNDASQNADGMSLPCANFCSKSKTECTMFSLQNADIIQVSVLLNSSAKSEKSSA 294

Query: 500 PTAEYIP 520
           P  EY P
Sbjct: 295 PVVEYFP 301


>ref|XP_004169634.1| PREDICTED: LOW QUALITY PROTEIN: probable Ufm1-specific
           protease-like [Cucumis sativus]
          Length = 640

 Score =  138 bits (348), Expect = 4e-31
 Identities = 77/187 (41%), Positives = 111/187 (59%), Gaps = 14/187 (7%)
 Frame = +2

Query: 2   VIGASADLTSGEIQYFDS-----TRMDPISSVVYEDSSPENYIWERGCLLRCGLDVKIPI 166
           +IGA AD+ S +I  F S     T +D +SSVVYE++ PE YIWERGCLLRC L + +P+
Sbjct: 109 LIGAVADINSADIHXFVSQSENDTSLDSVSSVVYENN-PEKYIWERGCLLRCELPISMPL 167

Query: 167 CFPVHNPADSERVFSSGVDDTIVKLRDPNVVFMIE----GAQETNGTVIVRGAKLNFQKD 334
             P+ +P+D E+ +    +  I KLRDP  V+++E       E    VI+RG++++FQ +
Sbjct: 168 YIPLDSPSDVEKAYEQATESVISKLRDPQAVYVVEQVNKNTSEDPCPVILRGSQMDFQIN 227

Query: 335 VSSYAILCENTSEDRGNSLFCSAFCSKNKP-----SRESADPIQVSIFFNKSGNPPNCSA 499
           +S +  L + +    G SL C+ FCSK+K      S ++AD IQVS+  N S      SA
Sbjct: 228 LSKFRHLNDASQNADGMSLPCANFCSKSKTECTMFSLQNADIIQVSVLLNSSAKSEKSSA 287

Query: 500 PTAEYIP 520
           P  EY P
Sbjct: 288 PVVEYFP 294


>emb|CBI14895.3| unnamed protein product [Vitis vinifera]
          Length = 647

 Score =  137 bits (344), Expect = 1e-30
 Identities = 79/184 (42%), Positives = 109/184 (59%), Gaps = 11/184 (5%)
 Frame = +2

Query: 2   VIGASADLTSGEIQYFDSTRMDP-----ISSVVYEDSSPENYIWERGCLLRCGLDVKIPI 166
           +IGA AD  SGEI +F S   +P     +SSV+YED+S + Y+W+ GCLL C L +K+P 
Sbjct: 115 LIGAVADSESGEIHFFVSRGENPAGLECVSSVIYEDNSGK-YVWDTGCLLHCVLPIKLPF 173

Query: 167 CFPVHNPADSERVFSSGVDDTIVKLRDPNVVFMIEGAQETN----GTVIVRGAKLNFQKD 334
            FPV++P+D+  ++    D  I KL+D +V +M+E   ET+    G VI+ GAKL+F  D
Sbjct: 174 YFPVNSPSDAGEMYLRATDVIIAKLKDSDVTYMVETLNETSVEAPGPVILHGAKLDFHAD 233

Query: 335 VSSYAILCENTSEDRGNSLFCSAFCSKNKP--SRESADPIQVSIFFNKSGNPPNCSAPTA 508
           +       +++      S  CS FCSKNK   S E AD IQVS+  NKS      +AP A
Sbjct: 234 LFDVNQFGDSSQGSGAKSFPCSYFCSKNKAVFSVEHADIIQVSLLLNKSRTSSKSAAPIA 293

Query: 509 EYIP 520
           EY P
Sbjct: 294 EYFP 297


>emb|CAN74983.1| hypothetical protein VITISV_002653 [Vitis vinifera]
          Length = 631

 Score =  137 bits (344), Expect = 1e-30
 Identities = 79/184 (42%), Positives = 109/184 (59%), Gaps = 11/184 (5%)
 Frame = +2

Query: 2   VIGASADLTSGEIQYFDSTRMDP-----ISSVVYEDSSPENYIWERGCLLRCGLDVKIPI 166
           +IGA AD  SGEI +F S   +P     +SSV+YED+S + Y+W+ GCLL C L +K+P 
Sbjct: 115 LIGAVADSESGEIHFFVSRGENPAGLECVSSVIYEDNSGK-YVWDTGCLLHCVLPIKLPF 173

Query: 167 CFPVHNPADSERVFSSGVDDTIVKLRDPNVVFMIEGAQETN----GTVIVRGAKLNFQKD 334
            FPV++P+D+  ++    D  I KL+D +V +M+E   ET+    G VI+ GAKL+F  D
Sbjct: 174 YFPVNSPSDAGEMYLRATDVIIAKLKDSDVTYMVETLNETSVEAPGPVILHGAKLDFHAD 233

Query: 335 VSSYAILCENTSEDRGNSLFCSAFCSKNKP--SRESADPIQVSIFFNKSGNPPNCSAPTA 508
           +       +++      S  CS FCSKNK   S E AD IQVS+  NKS      +AP A
Sbjct: 234 LFDVNQFGDSSQGSGAKSFPCSYFCSKNKAVFSVEHADIIQVSLLLNKSRTSSKSAAPIA 293

Query: 509 EYIP 520
           EY P
Sbjct: 294 EYFP 297


>ref|XP_002511273.1| conserved hypothetical protein [Ricinus communis]
           gi|223550388|gb|EEF51875.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 650

 Score =  136 bits (342), Expect = 2e-30
 Identities = 76/188 (40%), Positives = 111/188 (59%), Gaps = 15/188 (7%)
 Frame = +2

Query: 2   VIGASADLTSGEIQYFDS-----TRMDPISSVVYEDSSPENYIWERGCLLRCGLDVKIPI 166
           VIGA ADL SG+ ++F S     T ++ I+SV+YED  PE Y+WE+GCL+RC L +K+P 
Sbjct: 114 VIGAVADLDSGDTKFFVSRSGNLTSIESIASVIYEDH-PEKYVWEKGCLIRCHLPIKLPF 172

Query: 167 CFPVHNPADSERVFSSGVDDTIVKLRDPNVVFMIE----GAQETNGTVIVRGAKLNFQKD 334
           C PV+NP D+E++F    +  + +L+DP  V+M+E     + E     I+ G  L+F+ D
Sbjct: 173 CVPVNNPLDAEKMFLCATEAAVAQLKDPQAVYMVERLSNESLEVTAPAIICGTGLDFKTD 232

Query: 335 VSSYAILCENTSEDR-GNSLFCSAFC--SKNKP---SRESADPIQVSIFFNKSGNPPNCS 496
           +S   ++ +  S D     L C  FC  SK+ P   S E+AD I V++  N+S   P   
Sbjct: 233 LSDIKLVDKEASRDSDAKVLTCGDFCLNSKSSPTVFSAENADVILVTVLLNRSQKSPLSV 292

Query: 497 APTAEYIP 520
           AP AEY P
Sbjct: 293 APIAEYFP 300


Top