BLASTX nr result

ID: Coptis25_contig00028146 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028146
         (817 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277007.1| PREDICTED: uncharacterized protein LOC100263...   181   2e-43
ref|XP_004135188.1| PREDICTED: uncharacterized protein LOC101221...   180   3e-43
emb|CAN74870.1| hypothetical protein VITISV_020543 [Vitis vinifera]   180   4e-43
ref|XP_002315796.1| predicted protein [Populus trichocarpa] gi|2...   178   1e-42
ref|XP_002520112.1| conserved hypothetical protein [Ricinus comm...   175   9e-42

>ref|XP_002277007.1| PREDICTED: uncharacterized protein LOC100263597 [Vitis vinifera]
          Length = 201

 Score =  181 bits (458), Expect = 2e-43
 Identities = 107/198 (54%), Positives = 123/198 (62%), Gaps = 4/198 (2%)
 Frame = +1

Query: 22  TMSSIPIIT--YTSATPKHPQIPSNILFTNFPSNSTFKNTKPFITKLFVXXXXXXXXXXX 195
           T S+ PI++   TS T    Q  + + FT  PS  + +  +P  +KL V           
Sbjct: 7   TTSTAPILSPATTSTTHHSLQFSTKLSFTKLPSIPSSRTNRPH-SKLHVSSPTNKPTATT 65

Query: 196 XXXXXXXXX--IFFDGGAHYGDXXXXXXXXXXXXXXXXXXAAVSRAFFLRYRFTNLRVTV 369
                      IFFDGGAHYGD                  AAVSRAFFLRYRFTNLRVTV
Sbjct: 66  SKSTSKPTEETIFFDGGAHYGDLVANLLLGFTLLWLPLTLAAVSRAFFLRYRFTNLRVTV 125

Query: 370 ISGLSGQDRSDFSYKVIKDVKVVPRFIGEWGDIIITLKDGTIVDLRSVPKFREIAKYCLS 549
           ISGL+GQDRSDFSYKVIKDV+VVPRF+GEWGDI+ITLKDGT VDLRSVPKFREIA+YCLS
Sbjct: 126 ISGLTGQDRSDFSYKVIKDVQVVPRFVGEWGDIVITLKDGTKVDLRSVPKFREIAQYCLS 185

Query: 550 MVDNKSVGTDVNEAVPKG 603
           M    SV   + E+  KG
Sbjct: 186 MAGQSSV---LKESEAKG 200


>ref|XP_004135188.1| PREDICTED: uncharacterized protein LOC101221820 [Cucumis sativus]
           gi|449478434|ref|XP_004155317.1| PREDICTED:
           uncharacterized protein LOC101231077 [Cucumis sativus]
          Length = 197

 Score =  180 bits (457), Expect = 3e-43
 Identities = 103/190 (54%), Positives = 119/190 (62%), Gaps = 1/190 (0%)
 Frame = +1

Query: 37  PIITYTSATPKHPQIPSNILFT-NFPSNSTFKNTKPFITKLFVXXXXXXXXXXXXXXXXX 213
           P  T T+AT       ++  F  NFPS  T +  +P  T++FV                 
Sbjct: 11  PTATATAATATTSSSSTHRPFLYNFPSKITPQFNRP-TTRIFVSSSTNTSRAAANSKNAA 69

Query: 214 XXXIFFDGGAHYGDXXXXXXXXXXXXXXXXXXAAVSRAFFLRYRFTNLRVTVISGLSGQD 393
              +FFDGGAHYGD                  AAVSRAF+LRYRFTNLRVTVISGL+G+D
Sbjct: 70  EEIVFFDGGAHYGDLVANLLLGFTLLWLPLTLAAVSRAFYLRYRFTNLRVTVISGLTGED 129

Query: 394 RSDFSYKVIKDVKVVPRFIGEWGDIIITLKDGTIVDLRSVPKFREIAKYCLSMVDNKSVG 573
           RSDFSY VIKDV+VVPRFIGEWGD++ITL+DGT VDLRSVPKFREIAKYCLSM D  +V 
Sbjct: 130 RSDFSYNVIKDVQVVPRFIGEWGDVVITLQDGTKVDLRSVPKFREIAKYCLSMADKPAV- 188

Query: 574 TDVNEAVPKG 603
               E  PKG
Sbjct: 189 --PKETGPKG 196


>emb|CAN74870.1| hypothetical protein VITISV_020543 [Vitis vinifera]
          Length = 201

 Score =  180 bits (456), Expect = 4e-43
 Identities = 108/198 (54%), Positives = 123/198 (62%), Gaps = 4/198 (2%)
 Frame = +1

Query: 22  TMSSIPIIT--YTSATPKHPQIPSNILFTNFPSNSTFKNTKPFITKLFVXXXXXXXXXXX 195
           T S  PI++   TS T    Q  + + FT  PS  + +  +P  +KL V           
Sbjct: 7   TTSXAPILSPATTSTTHHSLQFSTKLSFTKLPSIPSSRTNRPH-SKLHVSSPTNKPTATT 65

Query: 196 XXXXXXXXX--IFFDGGAHYGDXXXXXXXXXXXXXXXXXXAAVSRAFFLRYRFTNLRVTV 369
                      IFFDGGAHYGD                  AAVSRAFFLRYRFTNLRVTV
Sbjct: 66  SKSXSKPTEETIFFDGGAHYGDLVANLLLGFTLLWLPLTLAAVSRAFFLRYRFTNLRVTV 125

Query: 370 ISGLSGQDRSDFSYKVIKDVKVVPRFIGEWGDIIITLKDGTIVDLRSVPKFREIAKYCLS 549
           ISGL+GQDRSDFSYKVIKDV+VVPRF+GEWGDI+ITLKDGT VDLRSVPKFREIA+YCLS
Sbjct: 126 ISGLTGQDRSDFSYKVIKDVQVVPRFVGEWGDIVITLKDGTKVDLRSVPKFREIAQYCLS 185

Query: 550 MVDNKSVGTDVNEAVPKG 603
           M    SV   + E+  KG
Sbjct: 186 MAGQSSV---LKESEAKG 200


>ref|XP_002315796.1| predicted protein [Populus trichocarpa] gi|222864836|gb|EEF01967.1|
           predicted protein [Populus trichocarpa]
          Length = 199

 Score =  178 bits (452), Expect = 1e-42
 Identities = 105/204 (51%), Positives = 123/204 (60%), Gaps = 11/204 (5%)
 Frame = +1

Query: 25  MSSIPII-----------TYTSATPKHPQIPSNILFTNFPSNSTFKNTKPFITKLFVXXX 171
           M+S+P++           T +S T +   + S + F  FP+ +        ITKL V   
Sbjct: 1   MASVPLLSPSTTAAASCRTSSSLTHQLLHLSSKVPFHTFPARN-----HRLITKLNVSSP 55

Query: 172 XXXXXXXXXXXXXXXXXIFFDGGAHYGDXXXXXXXXXXXXXXXXXXAAVSRAFFLRYRFT 351
                            IFFDGGAHYGD                  AAVSRAF+LRYRFT
Sbjct: 56  TNKPATSTTSKKPIEEIIFFDGGAHYGDLLANLLLGFTLLWLPLTLAAVSRAFYLRYRFT 115

Query: 352 NLRVTVISGLSGQDRSDFSYKVIKDVKVVPRFIGEWGDIIITLKDGTIVDLRSVPKFREI 531
           NLRVTVISGL+GQDRSDFSYKVIKDV+VVPRFIGEWGD++ITLKDGT VDLRSVPKFREI
Sbjct: 116 NLRVTVISGLTGQDRSDFSYKVIKDVQVVPRFIGEWGDVVITLKDGTKVDLRSVPKFREI 175

Query: 532 AKYCLSMVDNKSVGTDVNEAVPKG 603
           AKYCLSM + K V    +   P+G
Sbjct: 176 AKYCLSMAE-KPVVMKEDSTGPRG 198


>ref|XP_002520112.1| conserved hypothetical protein [Ricinus communis]
           gi|223540604|gb|EEF42167.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 200

 Score =  175 bits (444), Expect = 9e-42
 Identities = 109/197 (55%), Positives = 121/197 (61%), Gaps = 3/197 (1%)
 Frame = +1

Query: 22  TMSSIPIITYTSATPKHPQIPSNILFTNFPSNSTFKNTKPFITKLFVXXXXXXXXXXXXX 201
           T ++I  IT+ S       + SN+ F  F S    KN +P ITKL V             
Sbjct: 16  TATAISTITHQSLF-----LSSNLPFPVFHS----KNQRP-ITKLHVSSPTNKPITTSTT 65

Query: 202 XXXXXXX---IFFDGGAHYGDXXXXXXXXXXXXXXXXXXAAVSRAFFLRYRFTNLRVTVI 372
                     IFFDGGAHYGD                  AAVSRAFFLRYRFTNLRVTVI
Sbjct: 66  SSSKKPNEETIFFDGGAHYGDLVANLLLGFTLLWLPLTLAAVSRAFFLRYRFTNLRVTVI 125

Query: 373 SGLSGQDRSDFSYKVIKDVKVVPRFIGEWGDIIITLKDGTIVDLRSVPKFREIAKYCLSM 552
           SG +GQDRSDFSYKVIKDV+VVPRFIGEWGDI+ITLKDGT VDLRSVPKFREIAKYCL+M
Sbjct: 126 SGFTGQDRSDFSYKVIKDVQVVPRFIGEWGDIVITLKDGTKVDLRSVPKFREIAKYCLAM 185

Query: 553 VDNKSVGTDVNEAVPKG 603
            +   V   + E  PKG
Sbjct: 186 AEKPVV---LKENGPKG 199


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