BLASTX nr result

ID: Coptis25_contig00028145 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028145
         (458 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278500.1| PREDICTED: uncharacterized protein LOC100244...    70   4e-20
ref|XP_002280898.2| PREDICTED: uncharacterized protein LOC100260...    70   2e-18
emb|CBI16121.3| unnamed protein product [Vitis vinifera]               70   2e-18
emb|CAN81646.1| hypothetical protein VITISV_010798 [Vitis vinifera]    70   2e-18
ref|XP_003566886.1| PREDICTED: uncharacterized protein LOC100844...    57   2e-16

>ref|XP_002278500.1| PREDICTED: uncharacterized protein LOC100244410 [Vitis vinifera]
           gi|296086223|emb|CBI31664.3| unnamed protein product
           [Vitis vinifera]
          Length = 641

 Score = 70.1 bits (170), Expect(2) = 4e-20
 Identities = 29/43 (67%), Positives = 31/43 (72%)
 Frame = -3

Query: 132 VEFSKDWPGFHNAMSFEKSFEADHLGKTDWREKKSHGSQLYGW 4
           VEF+KDWPG HNAMSFEK +EADH GK DW      GS LY W
Sbjct: 179 VEFNKDWPGLHNAMSFEKEYEADHHGKKDWIASNGRGSGLYAW 221



 Score = 52.8 bits (125), Expect(2) = 4e-20
 Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
 Frame = -2

Query: 316 DKIEVSGSVVGASQSEVGLESQTEGKQDEVFVWPWIGVIVNIPVELRNGIYVG----ELK 149
           D ++V G   G S+ +   E+      DE+FVWPW GV+VNIP ELR+G Y+G    +L+
Sbjct: 94  DIMDVDGPSGGPSKPKS--EAPLGCDHDEMFVWPWTGVVVNIPTELRDGRYIGGSGSKLR 151

Query: 148 QEMT 137
            E+T
Sbjct: 152 DELT 155


>ref|XP_002280898.2| PREDICTED: uncharacterized protein LOC100260350 [Vitis vinifera]
          Length = 713

 Score = 70.1 bits (170), Expect(2) = 2e-18
 Identities = 28/43 (65%), Positives = 34/43 (79%)
 Frame = -3

Query: 132 VEFSKDWPGFHNAMSFEKSFEADHLGKTDWREKKSHGSQLYGW 4
           VEF KDWPGF NA++F+K+FEADH GK DW+  K  G +LYGW
Sbjct: 260 VEFDKDWPGFTNAIAFDKAFEADHRGKRDWKTAKRLGDKLYGW 302



 Score = 47.4 bits (111), Expect(2) = 2e-18
 Identities = 20/35 (57%), Positives = 24/35 (68%)
 Frame = -2

Query: 259 ESQTEGKQDEVFVWPWIGVIVNIPVELRNGIYVGE 155
           ES T    D  FVWPW+G+I NIPV+  +G YVGE
Sbjct: 192 ESSTANDADGHFVWPWVGIIANIPVQRIDGRYVGE 226


>emb|CBI16121.3| unnamed protein product [Vitis vinifera]
          Length = 626

 Score = 70.1 bits (170), Expect(2) = 2e-18
 Identities = 28/43 (65%), Positives = 34/43 (79%)
 Frame = -3

Query: 132 VEFSKDWPGFHNAMSFEKSFEADHLGKTDWREKKSHGSQLYGW 4
           VEF KDWPGF NA++F+K+FEADH GK DW+  K  G +LYGW
Sbjct: 173 VEFDKDWPGFTNAIAFDKAFEADHRGKRDWKTAKRLGDKLYGW 215



 Score = 47.4 bits (111), Expect(2) = 2e-18
 Identities = 20/35 (57%), Positives = 24/35 (68%)
 Frame = -2

Query: 259 ESQTEGKQDEVFVWPWIGVIVNIPVELRNGIYVGE 155
           ES T    D  FVWPW+G+I NIPV+  +G YVGE
Sbjct: 105 ESSTANDADGHFVWPWVGIIANIPVQRIDGRYVGE 139


>emb|CAN81646.1| hypothetical protein VITISV_010798 [Vitis vinifera]
          Length = 349

 Score = 70.1 bits (170), Expect(2) = 2e-18
 Identities = 28/43 (65%), Positives = 34/43 (79%)
 Frame = -3

Query: 132 VEFSKDWPGFHNAMSFEKSFEADHLGKTDWREKKSHGSQLYGW 4
           VEF KDWPGF NA++F+K+FEADH GK DW+  K  G +LYGW
Sbjct: 218 VEFDKDWPGFTNAIAFDKAFEADHRGKRDWKTAKRLGDKLYGW 260



 Score = 47.4 bits (111), Expect(2) = 2e-18
 Identities = 20/35 (57%), Positives = 24/35 (68%)
 Frame = -2

Query: 259 ESQTEGKQDEVFVWPWIGVIVNIPVELRNGIYVGE 155
           ES T    D  FVWPW+G+I NIPV+  +G YVGE
Sbjct: 150 ESSTANDADGHFVWPWVGIIANIPVQRIDGRYVGE 184


>ref|XP_003566886.1| PREDICTED: uncharacterized protein LOC100844455 [Brachypodium
           distachyon]
          Length = 636

 Score = 56.6 bits (135), Expect(2) = 2e-16
 Identities = 23/43 (53%), Positives = 30/43 (69%)
 Frame = -3

Query: 132 VEFSKDWPGFHNAMSFEKSFEADHLGKTDWREKKSHGSQLYGW 4
           VEF KD+ GF  A SFE  FEA+  GK DW+ +K  GS+++GW
Sbjct: 170 VEFGKDYKGFKAAFSFENHFEAEGYGKQDWKAQKHRGSEMFGW 212



 Score = 53.5 bits (127), Expect(2) = 2e-16
 Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 8/75 (10%)
 Frame = -2

Query: 334 DINNGDDKIEVSGSVVGASQSEV----GLESQTEGKQDEVFVWPWIGVIVNIPVELRNGI 167
           D   G DK    GS     ++E+    G  SQ    +DE+FVWPW+GV+VN+P E + G 
Sbjct: 75  DNRQGRDKATHRGSYQNHEKNELPQSSGPRSQPAQNRDELFVWPWMGVLVNVPTEWKGGR 134

Query: 166 YVGE----LKQEMTQ 134
            VGE    LK+++++
Sbjct: 135 QVGESGNRLKEQLSR 149


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