BLASTX nr result

ID: Coptis25_contig00028112 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028112
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275670.1| PREDICTED: uncharacterized protein LOC100259...    86   4e-15
ref|XP_004142791.1| PREDICTED: uncharacterized protein LOC101222...    75   6e-12
ref|XP_003554818.1| PREDICTED: uncharacterized protein LOC100776...    74   1e-11
ref|XP_003524559.1| PREDICTED: uncharacterized protein LOC100791...    74   2e-11
ref|XP_002873676.1| hypothetical protein ARALYDRAFT_909422 [Arab...    73   2e-11

>ref|XP_002275670.1| PREDICTED: uncharacterized protein LOC100259507 [Vitis vinifera]
          Length = 367

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 41/69 (59%), Positives = 51/69 (73%)
 Frame = +2

Query: 53  WKWRIKMFIVFFMSFCFVSLVVMQTQYSGITMXXXXXXXTIFVQKPKIAFLFIARNRLPL 232
           +KW+  +F +  + FCF SLV++QTQYS I M         F+Q+PKIAFLFIARNRLPL
Sbjct: 9   YKWKRNLFAMLLLGFCFGSLVLLQTQYSRIRMFASMPSP--FLQRPKIAFLFIARNRLPL 66

Query: 233 DVVWDAFFK 259
           DVVWDAFF+
Sbjct: 67  DVVWDAFFR 75


>ref|XP_004142791.1| PREDICTED: uncharacterized protein LOC101222566 [Cucumis sativus]
           gi|449483780|ref|XP_004156689.1| PREDICTED:
           uncharacterized LOC101222566 [Cucumis sativus]
          Length = 366

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 35/69 (50%), Positives = 44/69 (63%)
 Frame = +2

Query: 53  WKWRIKMFIVFFMSFCFVSLVVMQTQYSGITMXXXXXXXTIFVQKPKIAFLFIARNRLPL 232
           +KWR K+  V    FCF SLV+MQ++Y  + M             PK+AFLFIARNRLPL
Sbjct: 12  FKWRRKLAFVLLFVFCFGSLVMMQSRYGRVMMLASLHLHPQSAHGPKVAFLFIARNRLPL 71

Query: 233 DVVWDAFFK 259
           D+VWD FF+
Sbjct: 72  DIVWDVFFQ 80


>ref|XP_003554818.1| PREDICTED: uncharacterized protein LOC100776366 [Glycine max]
          Length = 365

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 37/72 (51%), Positives = 48/72 (66%), Gaps = 3/72 (4%)
 Frame = +2

Query: 56  KWRIKMFIVFFMSFCFVSLVVMQTQY---SGITMXXXXXXXTIFVQKPKIAFLFIARNRL 226
           KW+ K+F +  + FC  SL+ MQT+Y   +G+            VQ PKIAFLFIARNRL
Sbjct: 10  KWKKKLFALILVVFCLGSLLFMQTRYHHVAGLVSLQHRFVSEPEVQGPKIAFLFIARNRL 69

Query: 227 PLDVVWDAFFKG 262
           PL++VWDAFF+G
Sbjct: 70  PLEMVWDAFFRG 81


>ref|XP_003524559.1| PREDICTED: uncharacterized protein LOC100791308 [Glycine max]
          Length = 364

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 36/72 (50%), Positives = 48/72 (66%), Gaps = 3/72 (4%)
 Frame = +2

Query: 56  KWRIKMFIVFFMSFCFVSLVVMQTQY---SGITMXXXXXXXTIFVQKPKIAFLFIARNRL 226
           KW+ K+F +  + FC  SL+ MQT+Y   +G+            VQ PK+AFLFIARNRL
Sbjct: 9   KWKKKLFALILVVFCLGSLLFMQTRYHHVAGLVSLQHRFVSEPEVQGPKVAFLFIARNRL 68

Query: 227 PLDVVWDAFFKG 262
           PL++VWDAFF+G
Sbjct: 69  PLEMVWDAFFRG 80


>ref|XP_002873676.1| hypothetical protein ARALYDRAFT_909422 [Arabidopsis lyrata subsp.
           lyrata] gi|297319513|gb|EFH49935.1| hypothetical protein
           ARALYDRAFT_909422 [Arabidopsis lyrata subsp. lyrata]
          Length = 369

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 32/70 (45%), Positives = 47/70 (67%)
 Frame = +2

Query: 53  WKWRIKMFIVFFMSFCFVSLVVMQTQYSGITMXXXXXXXTIFVQKPKIAFLFIARNRLPL 232
           ++W+ K++     +FC  + V +Q +++GIT            QKP+IAFLFIARNRLPL
Sbjct: 12  YRWKRKVYATLMFAFCLGTFVFIQARFNGITASLDSLKKPRLDQKPQIAFLFIARNRLPL 71

Query: 233 DVVWDAFFKG 262
           ++VWDAFF+G
Sbjct: 72  ELVWDAFFQG 81


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