BLASTX nr result

ID: Coptis25_contig00028094 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028094
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147438.1| PREDICTED: uncharacterized protein LOC101217...    97   1e-18
emb|CAN78668.1| hypothetical protein VITISV_031288 [Vitis vinifera]    97   1e-18
ref|XP_002305043.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16
ref|NP_001042565.1| Os01g0243600 [Oryza sativa Japonica Group] g...    81   1e-13
ref|XP_002521341.1| conserved hypothetical protein [Ricinus comm...    78   6e-13

>ref|XP_004147438.1| PREDICTED: uncharacterized protein LOC101217056 [Cucumis sativus]
           gi|449527135|ref|XP_004170568.1| PREDICTED:
           uncharacterized LOC101217056 [Cucumis sativus]
          Length = 231

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 56/104 (53%), Positives = 70/104 (67%), Gaps = 1/104 (0%)
 Frame = -1

Query: 386 EEEGKNETMNVNNGCGS-FYSKIVGVKGPKSEKEMERLDGWIKYFLSNKDDDGVVKEPLR 210
           +E G     N   GC S FYSKIVG+KGPK  KE+ERL+GWI++F SN  D+    EPLR
Sbjct: 133 KEFGAKNGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFF-SNGGDEEDRLEPLR 191

Query: 209 LVHLLIGKAGVASTSCNEDEDNNGGFEDIEFPSTVEEFLEHDPP 78
           L +LL+GKA  AS       D++G  E +EFPSTVE+FL +DPP
Sbjct: 192 LAYLLLGKAVFAS------NDDDGCLEGLEFPSTVEDFLLNDPP 229


>emb|CAN78668.1| hypothetical protein VITISV_031288 [Vitis vinifera]
          Length = 224

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 47/87 (54%), Positives = 63/87 (72%)
 Frame = -1

Query: 335 FYSKIVGVKGPKSEKEMERLDGWIKYFLSNKDDDGVVKEPLRLVHLLIGKAGVASTSCNE 156
           FYS+IVGVKGPK  KE+ERL+GW+K+F +  +++   +EPLRL H+L+GKA   S +   
Sbjct: 142 FYSRIVGVKGPKCGKEVERLEGWVKHFYNGGEEER--REPLRLAHMLLGKAVFDSENSG- 198

Query: 155 DEDNNGGFEDIEFPSTVEEFLEHDPPT 75
                GGF  +EFPST+EEFL +DPPT
Sbjct: 199 --GGGGGFRGLEFPSTIEEFLHNDPPT 223


>ref|XP_002305043.1| predicted protein [Populus trichocarpa] gi|222848007|gb|EEE85554.1|
           predicted protein [Populus trichocarpa]
          Length = 217

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 54/110 (49%), Positives = 70/110 (63%), Gaps = 7/110 (6%)
 Frame = -1

Query: 386 EEEGKNETMNVNNG------C-GSFYSKIVGVKGPKSEKEMERLDGWIKYFLSNKDDDGV 228
           EE+  NE + V  G      C G F+ KIVGVKGPK EKE+ERL+GWI+YFL +  ++  
Sbjct: 116 EEDDVNERVCVGGGGGECCGCEGGFFEKIVGVKGPKCEKEVERLEGWIRYFLGDGGEER- 174

Query: 227 VKEPLRLVHLLIGKAGVASTSCNEDEDNNGGFEDIEFPSTVEEFLEHDPP 78
            +EPL L  LL+GKA        E E  +GG   ++FPST+EEFL+ DPP
Sbjct: 175 -REPLMLAFLLLGKAAY------ELEGADGG--GLDFPSTIEEFLKLDPP 215


>ref|NP_001042565.1| Os01g0243600 [Oryza sativa Japonica Group]
           gi|20160495|dbj|BAB89447.1| hypothetical protein [Oryza
           sativa Japonica Group] gi|21104532|dbj|BAB93127.1|
           hypothetical protein [Oryza sativa Japonica Group]
           gi|113532096|dbj|BAF04479.1| Os01g0243600 [Oryza sativa
           Japonica Group] gi|125569707|gb|EAZ11222.1| hypothetical
           protein OsJ_01076 [Oryza sativa Japonica Group]
          Length = 233

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 38/91 (41%), Positives = 58/91 (63%)
 Frame = -1

Query: 350 NGCGSFYSKIVGVKGPKSEKEMERLDGWIKYFLSNKDDDGVVKEPLRLVHLLIGKAGVAS 171
           +G   F +K+VGV GPK +KE  R+DGW++++ S     G  +EP RL HLL+ KA  +S
Sbjct: 141 SGGEGFLAKVVGVVGPKCDKEKRRVDGWVEHYFSG----GECREPARLAHLLLAKAAASS 196

Query: 170 TSCNEDEDNNGGFEDIEFPSTVEEFLEHDPP 78
           +S + + + + G     FP+TV+EFL+ D P
Sbjct: 197 SSSSWEGEGHRGASPFAFPATVKEFLDRDAP 227


>ref|XP_002521341.1| conserved hypothetical protein [Ricinus communis]
           gi|223539419|gb|EEF41009.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 221

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 46/106 (43%), Positives = 63/106 (59%), Gaps = 4/106 (3%)
 Frame = -1

Query: 383 EEGKNETMNVNNGC---GSFYSKIVGVKGPKSEKEMERLDGWIKYFLSNKDDDGVVK-EP 216
           +  K + +  N  C   G FY KIVGVKGPK + EM+RL+ WI YFL N +     + EP
Sbjct: 126 KRNKGQQVEGNECCECEGGFYEKIVGVKGPKCKIEMDRLERWIDYFLHNSECGAEGRMEP 185

Query: 215 LRLVHLLIGKAGVASTSCNEDEDNNGGFEDIEFPSTVEEFLEHDPP 78
           LRL  LL+G+A          E + G    ++FPST+E+FL++DPP
Sbjct: 186 LRLAFLLLGRATF--------ELDTG----LDFPSTIEDFLKYDPP 219


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