BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028092
         (1671 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516806.1| conserved hypothetical protein [Ricinus comm...   147   8e-33
ref|XP_003605032.1| F-box/kelch-repeat protein [Medicago truncat...   142   3e-31
ref|XP_003594083.1| F-box/kelch-repeat protein [Medicago truncat...   140   1e-30
gb|AAF30317.1|AC018907_17 hypothetical protein [Arabidopsis thal...   134   6e-29
ref|NP_566277.2| F-box/kelch-repeat protein [Arabidopsis thalian...   134   6e-29

>ref|XP_002516806.1| conserved hypothetical protein [Ricinus communis]
            gi|223543894|gb|EEF45420.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 403

 Score =  147 bits (371), Expect = 8e-33
 Identities = 117/389 (30%), Positives = 179/389 (46%), Gaps = 24/389 (6%)
 Frame = -3

Query: 1642 NLPHEIIIEILTRLPAKSLLKFRCVCKSWRTLTYDPTFTKMHF-----ARTLGSHDVSIL 1478
            NLPHEII+EIL R+  KSL +FRCV KSW +L   P F K        + TL S    ++
Sbjct: 21   NLPHEIIVEILKRVAVKSLCRFRCVSKSWLSLLSSPQFAKSQIDLALKSNTLYSKRRRLM 80

Query: 1477 ATTVNHFYKEFEMIEVD--------------DEENEILSGLGFRKYSKTHIYCVDGSSGF 1340
             ++ N +  ++E I +D              D+ NEI   LG  +    +    +     
Sbjct: 81   FSSYNLYSVDYESIGIDNGDIIAVELDYPLKDKSNEI---LGPSENDGIYFKVSEDEDEN 137

Query: 1339 EVQFKIK-DPFVESYYYEDLEIVGSCNGIVCLVKSND-VCLLNPYTREYKIVNFEHQFNF 1166
             V  K+   PFV S  +  +EI GSCNG++C+    D + L NP TRE K +  E     
Sbjct: 138  PVMVKVDVQPFVNSRNW--VEIWGSCNGLLCIAPDEDSLFLFNPSTRESKKILEES---- 191

Query: 1165 NLEHTYGLGYDPTSDDFKLVHFDCSPESISQVSVYSLNDASCVNVSNVPYQILELKESGV 986
            N    +G GYD T DD+K+V  +    S    SVYSL   S   + N  +       SG 
Sbjct: 192  NYVTAFGFGYDSTRDDYKVVRINAGVAS----SVYSLRTDSWRKIDNFCHDFC-FHHSG- 245

Query: 985  VFLNGALHWIARRTSEGCE---ILISFNIEEKIIREFSRPVGVNEFAFMSVXXXXXXXXX 815
            VFL GA+HW+A    E  +   ++ +F++E+++  +   P   ++ +   +         
Sbjct: 246  VFLRGAIHWMAINREEVDDEYYVISAFDMEKELFWDMPAPDMEDDDSEFMLGTLNEDLCV 305

Query: 814  XCKTYDTDIDIWVLKNYSLSDSWVKLFTIGETVMISVKNSWPTSVGYNEPNPRPLCFCKN 635
                 +   D WV+  Y + +SW +L                 ++  +    +PLC  KN
Sbjct: 306  LKSFNEMHNDFWVMHEYGVGESWTRL-----------------TISLSYICMKPLCLAKN 348

Query: 634  GEVLLRDSDRIVVYDPKDKTSRDLKVHFI 548
            GE LL    R+V Y+ ++ T ++L VH I
Sbjct: 349  GEALLDIDGRLVQYNLENNTYKELVVHGI 377


>ref|XP_003605032.1| F-box/kelch-repeat protein [Medicago truncatula]
            gi|355506087|gb|AES87229.1| F-box/kelch-repeat protein
            [Medicago truncatula]
          Length = 354

 Score =  142 bits (357), Expect = 3e-31
 Identities = 105/360 (29%), Positives = 170/360 (47%), Gaps = 8/360 (2%)
 Frame = -3

Query: 1639 LPHEIIIEILTRLPAKSLLKFRCVCKSWRTLTYDPTFTKMHFARTLGSHDVSILATTVNH 1460
            LPHE+II+IL RLP KSL+ F+CVCKSW +L  DP F   HF     +H    L  +   
Sbjct: 9    LPHELIIQILMRLPVKSLICFKCVCKSWFSLISDPHFENSHFQLASATHTCRFLCIST-- 66

Query: 1459 FYKEFEMIEVDDEENEILSGLGFRKYSKTHIYCVDGSSGFEVQFKIKDPFVESYYYEDLE 1280
              +  E+  +D E                  +  D  +   + F +     ESY+   +E
Sbjct: 67   --QSHEIRSIDFE-----------------AFLNDDPASVNLNFSLP----ESYF--PVE 101

Query: 1279 IVGSCNGIVCLVKSNDVCLLNP---YTREYKIVNFEHQFNFNLEHTYGLGYDPTSDDFKL 1109
            I GSC G + L +  ++ L NP   +  +  +  F+ +   ++ H +G GYD + DD+ +
Sbjct: 102  IRGSCRGFILLYRPPNIHLWNPSIGFKTQIPVSPFDSK---SIAHCHGFGYDQSRDDYLV 158

Query: 1108 VHFDCSPESISQVSVYSLNDASCVNV---SNVPYQILELKESGVVFLNGALHWIARRTSE 938
            V F       S + V+S  D +   +   ++ PY ++  +  G +F NGA+HW+A R   
Sbjct: 159  VEFS---HVSSHLEVFSFRDNTWKEIDGHTHFPYVVVPSQRKGFLF-NGAIHWLAYRRDL 214

Query: 937  GCEILISFNIEEKIIREFSRPVGVNEFAFMSVXXXXXXXXXXCKTYDTD-IDIWVLKNYS 761
               ++++F++ EK + E   P   N     S+           K YD D I IWV+K Y 
Sbjct: 215  KLNVIVTFDLMEKKMFEMPVPSDFNNGYLYSLWVFGEFLSLCAKDYDNDTIVIWVMKEYK 274

Query: 760  LSDSWVKLFTIGETVMISVKNSWPTSVGYNEPNPRPLCFCKNGEVLLRD-SDRIVVYDPK 584
            +  SW K      T+++SV           +   +P+   KNG+++ R+ S R+V Y+ K
Sbjct: 275  VHSSWTK------TLVLSVD-------AIPDHYFQPIYSTKNGDIIGRNLSTRLVKYNDK 321


>ref|XP_003594083.1| F-box/kelch-repeat protein [Medicago truncatula]
            gi|355483131|gb|AES64334.1| F-box/kelch-repeat protein
            [Medicago truncatula]
          Length = 366

 Score =  140 bits (353), Expect = 1e-30
 Identities = 112/379 (29%), Positives = 175/379 (46%), Gaps = 22/379 (5%)
 Frame = -3

Query: 1639 LPHEIIIEILTRLPAKSLLKFRCVCKSWRTLTYDPTFTK--MHFART----LGSHDVSIL 1478
            LP E+I+EIL +LP KSLL+FRCVCKSW  +  +P F K  +HF+        +H + + 
Sbjct: 8    LPEELILEILIKLPIKSLLRFRCVCKSWLHIISNPYFIKKQLHFSTQNTHFTTNHRIILS 67

Query: 1477 ATTVNHFYKEFEMIEVDDEENEILSGLGFRKYSKTHIYCVDGSSGFEVQFKIKDPFVESY 1298
            ATT      EF +                +  S T ++    +   ++ + +K+ F    
Sbjct: 68   ATTA-----EFHL----------------KSCSITSLFNNPSTVSDDLNYPVKNKFRHD- 105

Query: 1297 YYEDLEIVGSCNGIVCL-VKSNDVCLLNPYTR-EYKIVNFEHQFNFNLEHTYGLGYDPTS 1124
                  IVGSCNG++C  +K + V L NP  R   K     + +       +GLGYD  +
Sbjct: 106  -----GIVGSCNGLLCFAIKGDCVLLWNPSIRVSKKSPPLGNNWRPGCFTCFGLGYDHVN 160

Query: 1123 DDFKLVHFDCSPE---SISQVSVYSLNDASCVNVSNVPYQILELKESGVVFLNGALHWIA 953
            DD+K+V   C P    S S+V VYS+   +   + + P+ +   + S   F++G L+W +
Sbjct: 161  DDYKVVAVFCDPNEFFSESKVKVYSMATNTWRKIHDFPHGVSPYQNSSGKFVSGTLNWAS 220

Query: 952  RRT--SEGCEILISFNIEEKIIREFSRPVGVNEFAFMSVXXXXXXXXXXCKTYD---TDI 788
              +  S     ++S ++E++  RE   P    E    S           C  YD   TD 
Sbjct: 221  NYSIGSSSFWTIVSLDLEKETYREVLPPDYEKEEC--STPSLSVLKGCLCMNYDYKKTDF 278

Query: 787  DIWVLKNYSLSDSWVKLFTIGETVMISVKNSWPTSVGYNEPNPR------PLCFCKNGEV 626
             +W++K+Y + +SW+KL TI                    PNP       P C  +NGEV
Sbjct: 279  VVWLMKDYGVRESWIKLLTIPYL-----------------PNPEDFSYSGPYCISENGEV 321

Query: 625  LLRDSDRIVVYDPKDKTSR 569
            LL     +++YDP+D + R
Sbjct: 322  LLMFEFDLILYDPRDHSFR 340


>gb|AAF30317.1|AC018907_17 hypothetical protein [Arabidopsis thaliana]
            gi|21536665|gb|AAM60997.1| unknown [Arabidopsis thaliana]
          Length = 416

 Score =  134 bits (338), Expect = 6e-29
 Identities = 118/413 (28%), Positives = 182/413 (44%), Gaps = 29/413 (7%)
 Frame = -3

Query: 1639 LPHEIIIEILTRLPAKSLLKFRCVCKSWRTLTYDPTFTKMHFARTLGSHDV-----SILA 1475
            LP EII EIL RLPAKS+ +FRCV K + TL+ DP F K+H    L +  V      ++ 
Sbjct: 25   LPPEIITEILLRLPAKSIGRFRCVSKLFCTLSSDPGFAKIHLDLILRNESVRSLHRKLIV 84

Query: 1474 TTVNHFYKEFEMIE--VDD-----------EENEILSGLGFRKYSKTHIYCVDGSSGFEV 1334
            ++ N +  +F  I   + D           ++  I S +  R Y   H+Y         V
Sbjct: 85   SSHNLYSLDFNSIGDGIRDLAAVEHNYPLKDDPSIFSEM-IRNYVGDHLY-----DDRRV 138

Query: 1333 QFKIKDPFVESYYYEDLEIVGSCNGIVCLVKSND-VCLLNPYTREYKIV--NFEH---QF 1172
              K+     +SY    +EIVGS NG+VC+      V L NP T + K +  NF     ++
Sbjct: 139  MLKLN---AKSYRRNWVEIVGSSNGLVCISPGEGAVFLYNPTTGDSKRLPENFRPKSVEY 195

Query: 1171 NFNLEHTYGLGYDPTSDDFKLVHFDCSPESISQVSVYSLNDASCVNVSNVPYQILELKES 992
              +   TYG G+D  +DD+KLV    + E I   SVYSL   S   + N+ Y+  +   +
Sbjct: 196  ERDNFQTYGFGFDGLTDDYKLVKLVATSEDILDASVYSLKADSWRRICNLNYEHNDGSYT 255

Query: 991  GVVFLNGALHWIARRTSEGCEILISFNIEEKIIREFSRPVGVNE----FAFMSVXXXXXX 824
              V  NGA+HW+   +     ++++F+I+ +  RE   P    +    F+   V      
Sbjct: 256  SGVHFNGAIHWVFTESRHNQRVVVAFDIQTEEFREMPVPDEAEDCSHRFSNFVVGSLNGR 315

Query: 823  XXXXCKTYDTDIDIWVLKNYSLSDSWVKLFTIGETVMISVKNSWPTSVGYNEPNPRPLCF 644
                   YD   DIWV+  Y  + SW ++                  +     + +PLC 
Sbjct: 316  LCVVNSCYDVHDDIWVMSEYGEAKSWSRI-----------------RINLLYRSMKPLCS 358

Query: 643  CKNG-EVLLRDSDRIVVYDPKDKTSRDLKVHFISHCSRMAIMIHFASLVPLNS 488
             KN  EVLL     +V+Y+ +   S +L +  +          +  SL+  NS
Sbjct: 359  TKNDEEVLLELDGDLVLYNFETNASSNLGICGVKLSDGFEANTYVESLISPNS 411


>ref|NP_566277.2| F-box/kelch-repeat protein [Arabidopsis thaliana]
            gi|75151183|sp|Q8GXC7.1|FBK50_ARATH RecName:
            Full=F-box/kelch-repeat protein At3g06240
            gi|26451648|dbj|BAC42921.1| unknown protein [Arabidopsis
            thaliana] gi|29824145|gb|AAP04033.1| putative F-box
            protein family [Arabidopsis thaliana]
            gi|332640843|gb|AEE74364.1| F-box/kelch-repeat protein
            [Arabidopsis thaliana]
          Length = 427

 Score =  134 bits (338), Expect = 6e-29
 Identities = 118/413 (28%), Positives = 182/413 (44%), Gaps = 29/413 (7%)
 Frame = -3

Query: 1639 LPHEIIIEILTRLPAKSLLKFRCVCKSWRTLTYDPTFTKMHFARTLGSHDV-----SILA 1475
            LP EII EIL RLPAKS+ +FRCV K + TL+ DP F K+H    L +  V      ++ 
Sbjct: 36   LPPEIITEILLRLPAKSIGRFRCVSKLFCTLSSDPGFAKIHLDLILRNESVRSLHRKLIV 95

Query: 1474 TTVNHFYKEFEMIE--VDD-----------EENEILSGLGFRKYSKTHIYCVDGSSGFEV 1334
            ++ N +  +F  I   + D           ++  I S +  R Y   H+Y         V
Sbjct: 96   SSHNLYSLDFNSIGDGIRDLAAVEHNYPLKDDPSIFSEM-IRNYVGDHLY-----DDRRV 149

Query: 1333 QFKIKDPFVESYYYEDLEIVGSCNGIVCLVKSND-VCLLNPYTREYKIV--NFEH---QF 1172
              K+     +SY    +EIVGS NG+VC+      V L NP T + K +  NF     ++
Sbjct: 150  MLKLN---AKSYRRNWVEIVGSSNGLVCISPGEGAVFLYNPTTGDSKRLPENFRPKSVEY 206

Query: 1171 NFNLEHTYGLGYDPTSDDFKLVHFDCSPESISQVSVYSLNDASCVNVSNVPYQILELKES 992
              +   TYG G+D  +DD+KLV    + E I   SVYSL   S   + N+ Y+  +   +
Sbjct: 207  ERDNFQTYGFGFDGLTDDYKLVKLVATSEDILDASVYSLKADSWRRICNLNYEHNDGSYT 266

Query: 991  GVVFLNGALHWIARRTSEGCEILISFNIEEKIIREFSRPVGVNE----FAFMSVXXXXXX 824
              V  NGA+HW+   +     ++++F+I+ +  RE   P    +    F+   V      
Sbjct: 267  SGVHFNGAIHWVFTESRHNQRVVVAFDIQTEEFREMPVPDEAEDCSHRFSNFVVGSLNGR 326

Query: 823  XXXXCKTYDTDIDIWVLKNYSLSDSWVKLFTIGETVMISVKNSWPTSVGYNEPNPRPLCF 644
                   YD   DIWV+  Y  + SW ++                  +     + +PLC 
Sbjct: 327  LCVVNSCYDVHDDIWVMSEYGEAKSWSRI-----------------RINLLYRSMKPLCS 369

Query: 643  CKNG-EVLLRDSDRIVVYDPKDKTSRDLKVHFISHCSRMAIMIHFASLVPLNS 488
             KN  EVLL     +V+Y+ +   S +L +  +          +  SL+  NS
Sbjct: 370  TKNDEEVLLELDGDLVLYNFETNASSNLGICGVKLSDGFEANTYVESLISPNS 422