BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028086
         (923 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279153.1| PREDICTED: DNA replication complex GINS prot...   285   1e-74
ref|XP_003564787.1| PREDICTED: DNA replication complex GINS prot...   257   2e-66
ref|XP_002274677.2| PREDICTED: DNA replication complex GINS prot...   257   3e-66
dbj|BAK06665.1| predicted protein [Hordeum vulgare subsp. vulgare]    249   5e-64
gb|ACN35320.1| unknown [Zea mays] gi|414590788|tpg|DAA41359.1| T...   248   1e-63

>ref|XP_002279153.1| PREDICTED: DNA replication complex GINS protein SLD5 [Vitis
           vinifera] gi|296083231|emb|CBI22867.3| unnamed protein
           product [Vitis vinifera]
          Length = 220

 Score =  285 bits (728), Expect = 1e-74
 Identities = 149/205 (72%), Positives = 175/205 (85%)
 Frame = -2

Query: 895 MAAGTKEGLEFETEEIDDPSIATTPNDVEPMKRAWRNEKASPEILEFQSDLVDRIRGQIE 716
           MA+G++EG  F  ++ +   IATT  DVE +KRAWRNEKA+PEIL FQ+ LV R R QI+
Sbjct: 1   MASGSEEGSGFPADDYES-LIATT--DVELLKRAWRNEKAAPEILHFQTALVQRSREQIQ 57

Query: 715 LNERNVEEFEQNGTDPLTISLYQMDLDRSQFLLRSYLRIRLYKIEKYMIYISKTTDMWNR 536
           L E  VEEF +NGTDPLT+SLYQMDLDR+QFLLRSYLRIRL KIEKYM +I KT D+W+R
Sbjct: 58  LMEETVEEFGENGTDPLTVSLYQMDLDRTQFLLRSYLRIRLQKIEKYMFHILKT-DVWSR 116

Query: 535 LSEQEQKFAKRCIDDMEKHLTQSVLSRLPFGYQSMMKQSISSEEDDLVPEPQLDTFVFCK 356
           LSEQEQKFAKRC DDME+HL QSVLSRLP GYQS++KQS++SEEDD+VPEP+LDTFVFCK
Sbjct: 117 LSEQEQKFAKRCTDDMERHLEQSVLSRLPDGYQSILKQSVASEEDDMVPEPRLDTFVFCK 176

Query: 355 SKGSLGAFQLDESGDEIVDLVADDL 281
           SKGS+ AFQLD+S  E+VDLVADDL
Sbjct: 177 SKGSIEAFQLDDS-KEVVDLVADDL 200


>ref|XP_003564787.1| PREDICTED: DNA replication complex GINS protein SLD5-like
           [Brachypodium distachyon]
          Length = 215

 Score =  257 bits (657), Expect = 2e-66
 Identities = 127/189 (67%), Positives = 153/189 (80%)
 Frame = -2

Query: 847 DDPSIATTPNDVEPMKRAWRNEKASPEILEFQSDLVDRIRGQIELNERNVEEFEQNGTDP 668
           +D + A    DVE +KRAWRNEKA+PEIL F S LV R R QI+L E  +E+F  NG D 
Sbjct: 7   EDTASAAATTDVELLKRAWRNEKAAPEILRFDSPLVSRAREQIQLLEETLEDFTDNGVDD 66

Query: 667 LTISLYQMDLDRSQFLLRSYLRIRLYKIEKYMIYISKTTDMWNRLSEQEQKFAKRCIDDM 488
           L +SLYQMDLDR+ FLLRSYLR+RL KIEKYMI+ISK+ D+ +RLS QEQ+FAK C + M
Sbjct: 67  LVVSLYQMDLDRALFLLRSYLRLRLQKIEKYMIHISKSDDLMSRLSLQEQRFAKSCTEIM 126

Query: 487 EKHLTQSVLSRLPFGYQSMMKQSISSEEDDLVPEPQLDTFVFCKSKGSLGAFQLDESGDE 308
           EKHL QSVLS+LP+GY S+ +QS+SS EDD+VPEPQLDTFVFCK+K  +GAFQLD+ G+E
Sbjct: 127 EKHLEQSVLSKLPYGYDSVTRQSLSSTEDDMVPEPQLDTFVFCKTKSDVGAFQLDDIGEE 186

Query: 307 IVDLVADDL 281
           IVDLVADDL
Sbjct: 187 IVDLVADDL 195


>ref|XP_002274677.2| PREDICTED: DNA replication complex GINS protein SLD5-like [Vitis
           vinifera]
          Length = 214

 Score =  257 bits (656), Expect = 3e-66
 Identities = 139/205 (67%), Positives = 167/205 (81%)
 Frame = -2

Query: 895 MAAGTKEGLEFETEEIDDPSIATTPNDVEPMKRAWRNEKASPEILEFQSDLVDRIRGQIE 716
           M +G++E   F  ++ +   IATT  DVE +KRAW NEKA+PEIL FQ+      R QI+
Sbjct: 1   MVSGSEEESGFPADDYES-LIATT--DVELLKRAWMNEKAAPEILHFQT------REQIQ 51

Query: 715 LNERNVEEFEQNGTDPLTISLYQMDLDRSQFLLRSYLRIRLYKIEKYMIYISKTTDMWNR 536
           L E  VEEF +NGTDPLT+SLYQM+LDR+QFLLRSYL+IRL KIEKYM +I KT D+W+ 
Sbjct: 52  LMEETVEEFGENGTDPLTVSLYQMNLDRTQFLLRSYLQIRLQKIEKYMFHILKT-DVWSW 110

Query: 535 LSEQEQKFAKRCIDDMEKHLTQSVLSRLPFGYQSMMKQSISSEEDDLVPEPQLDTFVFCK 356
           LSEQEQKFAKRC DDME+HL QSVLSRLP GYQS++KQS++SEEDD+VPEP+LDTFVF K
Sbjct: 111 LSEQEQKFAKRCTDDMERHLEQSVLSRLPDGYQSILKQSVASEEDDMVPEPRLDTFVFYK 170

Query: 355 SKGSLGAFQLDESGDEIVDLVADDL 281
           SKGS+ AFQLD+S  E+VDLVADDL
Sbjct: 171 SKGSIEAFQLDDS-KEVVDLVADDL 194


>dbj|BAK06665.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 217

 Score =  249 bits (637), Expect = 5e-64
 Identities = 125/195 (64%), Positives = 155/195 (79%)
 Frame = -2

Query: 865 FETEEIDDPSIATTPNDVEPMKRAWRNEKASPEILEFQSDLVDRIRGQIELNERNVEEFE 686
           +E E+    S A T  DVE +KRAWRNEKA+PEIL F S LV R R QI+L E  +++F 
Sbjct: 4   WEDEDSAAASAAAT-TDVELLKRAWRNEKAAPEILHFDSALVSRAREQIQLLEETLDDFT 62

Query: 685 QNGTDPLTISLYQMDLDRSQFLLRSYLRIRLYKIEKYMIYISKTTDMWNRLSEQEQKFAK 506
            NG D L +SLYQMDLDR+ FLLRSYLR+RL KIEKYM +I+ + D+ +RLS+QEQ+FAK
Sbjct: 63  DNGVDDLVVSLYQMDLDRTLFLLRSYLRLRLQKIEKYMAHIANSDDLLSRLSQQEQRFAK 122

Query: 505 RCIDDMEKHLTQSVLSRLPFGYQSMMKQSISSEEDDLVPEPQLDTFVFCKSKGSLGAFQL 326
            C + MEKHL QSVLS+LP+GY S+ +QS+SS EDD+VPEPQLDTFVFCK+K  +GAFQL
Sbjct: 123 SCKEIMEKHLEQSVLSKLPYGYDSVTRQSLSSTEDDMVPEPQLDTFVFCKTKSDVGAFQL 182

Query: 325 DESGDEIVDLVADDL 281
           D+ G+E+VDLVADDL
Sbjct: 183 DDIGEEVVDLVADDL 197


>gb|ACN35320.1| unknown [Zea mays] gi|414590788|tpg|DAA41359.1| TPA: SLD5 [Zea
           mays]
          Length = 219

 Score =  248 bits (633), Expect = 1e-63
 Identities = 121/184 (65%), Positives = 153/184 (83%)
 Frame = -2

Query: 832 ATTPNDVEPMKRAWRNEKASPEILEFQSDLVDRIRGQIELNERNVEEFEQNGTDPLTISL 653
           ATT  DVE +KRAWRNEKA+PEIL F S LV R+R Q +L E  +++F  +G D L +SL
Sbjct: 18  ATT--DVELLKRAWRNEKAAPEILRFDSPLVSRVREQTQLLEETLDDFADSGVDDLVVSL 75

Query: 652 YQMDLDRSQFLLRSYLRIRLYKIEKYMIYISKTTDMWNRLSEQEQKFAKRCIDDMEKHLT 473
           YQMDLDR+ FLLRSYLR+RL KIEKY ++IS++ D+ +RLS+QE++FAK C + MEKHL 
Sbjct: 76  YQMDLDRTLFLLRSYLRLRLQKIEKYTMHISRSEDLLSRLSQQERRFAKSCAEIMEKHLE 135

Query: 472 QSVLSRLPFGYQSMMKQSISSEEDDLVPEPQLDTFVFCKSKGSLGAFQLDESGDEIVDLV 293
           QSVLS+LP+GY S+ +QS+SS EDD+VPEPQLDTFVFCK+KG +GAFQLD+ G+E+VDLV
Sbjct: 136 QSVLSKLPYGYDSVSRQSLSSTEDDMVPEPQLDTFVFCKTKGDVGAFQLDDIGEEVVDLV 195

Query: 292 ADDL 281
           ADDL
Sbjct: 196 ADDL 199