BLASTX nr result

ID: Coptis25_contig00028083 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028083
         (584 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280033.1| PREDICTED: uncharacterized protein LOC100262...   348   3e-94
ref|XP_002516097.1| conserved hypothetical protein [Ricinus comm...   341   6e-92
ref|XP_002309488.1| predicted protein [Populus trichocarpa] gi|2...   339   2e-91
dbj|BAK61820.1| hypothetical protein [Citrus unshiu]                  337   1e-90
ref|XP_002332479.1| predicted protein [Populus trichocarpa] gi|2...   335   3e-90

>ref|XP_002280033.1| PREDICTED: uncharacterized protein LOC100262760 [Vitis vinifera]
           gi|296081670|emb|CBI20675.3| unnamed protein product
           [Vitis vinifera]
          Length = 484

 Score =  348 bits (894), Expect = 3e-94
 Identities = 166/194 (85%), Positives = 182/194 (93%)
 Frame = +3

Query: 3   FPESEFRQAFRMSPATFDLICEELNSVVAKEDTMLRAAIPVRQRVAVCIWRLATGEPLRL 182
           FPE EFR+AFRMS ATFD+IC+ELNSVVAKEDTMLRAAIPVRQRVAVCIWRLATGEPLRL
Sbjct: 153 FPEEEFRKAFRMSRATFDMICDELNSVVAKEDTMLRAAIPVRQRVAVCIWRLATGEPLRL 212

Query: 183 VSKRFGLGISTCHKLVLEVCLAIKTVLMPKFLQWPDEDTQDGIKKEFEKASGIPNVIGSM 362
           VSK+FGLGISTCHKLVLEVC AI+TVLMPK+LQWPDE+T   +K EFE  SGIPNV+GSM
Sbjct: 213 VSKKFGLGISTCHKLVLEVCSAIRTVLMPKYLQWPDEETLRRMKDEFESISGIPNVVGSM 272

Query: 363 YTTHIPIIAPKVSVAAYFNKRHTERNQKTSYSITVQGVVNPKGVFTDICIGWPGSMPDHE 542
           YTTHIPIIAPK+SVAAYFN+RHTERNQKTSYSITVQGVV+PKGVFTD+CIGWPGSMPD +
Sbjct: 273 YTTHIPIIAPKISVAAYFNRRHTERNQKTSYSITVQGVVDPKGVFTDVCIGWPGSMPDDQ 332

Query: 543 ILEKSALYHRGSGG 584
           +LEKSALY R +GG
Sbjct: 333 VLEKSALYQRANGG 346


>ref|XP_002516097.1| conserved hypothetical protein [Ricinus communis]
           gi|223544583|gb|EEF46099.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 498

 Score =  341 bits (874), Expect = 6e-92
 Identities = 162/194 (83%), Positives = 177/194 (91%)
 Frame = +3

Query: 3   FPESEFRQAFRMSPATFDLICEELNSVVAKEDTMLRAAIPVRQRVAVCIWRLATGEPLRL 182
           +PE EF++AFRMS ATFDLICEEL+S + KEDT LR AIPVRQRVAVCIWRLATGEPLRL
Sbjct: 167 YPEEEFKKAFRMSKATFDLICEELHSCIQKEDTTLRNAIPVRQRVAVCIWRLATGEPLRL 226

Query: 183 VSKRFGLGISTCHKLVLEVCLAIKTVLMPKFLQWPDEDTQDGIKKEFEKASGIPNVIGSM 362
           VSKRFGLGISTCHKLVLEVC AIK VLMPK+LQWPDED+   +K EFE  SGIPNV+GSM
Sbjct: 227 VSKRFGLGISTCHKLVLEVCSAIKNVLMPKYLQWPDEDSLKKVKNEFESISGIPNVVGSM 286

Query: 363 YTTHIPIIAPKVSVAAYFNKRHTERNQKTSYSITVQGVVNPKGVFTDICIGWPGSMPDHE 542
           YTTHIPIIAPK+SVAAYFNKRHTERNQKTSYSITVQGVV+PKGVFTD+CIGWPGSMPD +
Sbjct: 287 YTTHIPIIAPKISVAAYFNKRHTERNQKTSYSITVQGVVDPKGVFTDVCIGWPGSMPDDQ 346

Query: 543 ILEKSALYHRGSGG 584
           +LEKSALY R +GG
Sbjct: 347 VLEKSALYQRANGG 360


>ref|XP_002309488.1| predicted protein [Populus trichocarpa] gi|222855464|gb|EEE93011.1|
           predicted protein [Populus trichocarpa]
          Length = 507

 Score =  339 bits (870), Expect = 2e-91
 Identities = 160/194 (82%), Positives = 178/194 (91%)
 Frame = +3

Query: 3   FPESEFRQAFRMSPATFDLICEELNSVVAKEDTMLRAAIPVRQRVAVCIWRLATGEPLRL 182
           +PE EF++AFRMS +TFD+ICEELNSV+AKEDT LR AIPVRQRVAVCIWRLATGEPLRL
Sbjct: 176 YPEEEFKKAFRMSKSTFDMICEELNSVIAKEDTTLRNAIPVRQRVAVCIWRLATGEPLRL 235

Query: 183 VSKRFGLGISTCHKLVLEVCLAIKTVLMPKFLQWPDEDTQDGIKKEFEKASGIPNVIGSM 362
           VSKRFGLGISTCHKLVLEVC AI++VLMPK+LQWPDED    IK EFE  SGIPN +GSM
Sbjct: 236 VSKRFGLGISTCHKLVLEVCSAIRSVLMPKYLQWPDEDGLRKIKNEFESISGIPNAVGSM 295

Query: 363 YTTHIPIIAPKVSVAAYFNKRHTERNQKTSYSITVQGVVNPKGVFTDICIGWPGSMPDHE 542
           YTTHIPIIAPK+SVAAYFNKRHTERNQKTSYSITVQGVV+PKG+FTD+CIGWPGSMPD +
Sbjct: 296 YTTHIPIIAPKISVAAYFNKRHTERNQKTSYSITVQGVVDPKGIFTDVCIGWPGSMPDDQ 355

Query: 543 ILEKSALYHRGSGG 584
           +LEKSAL+ R +GG
Sbjct: 356 VLEKSALFQRANGG 369


>dbj|BAK61820.1| hypothetical protein [Citrus unshiu]
          Length = 515

 Score =  337 bits (863), Expect = 1e-90
 Identities = 160/194 (82%), Positives = 175/194 (90%)
 Frame = +3

Query: 3   FPESEFRQAFRMSPATFDLICEELNSVVAKEDTMLRAAIPVRQRVAVCIWRLATGEPLRL 182
           +PE EF++ FRM   TFD+ICEELNSV+AKEDT LR AIPVRQRVAVCIWRLATGEPLRL
Sbjct: 184 YPEEEFKKWFRMRRQTFDMICEELNSVIAKEDTTLRNAIPVRQRVAVCIWRLATGEPLRL 243

Query: 183 VSKRFGLGISTCHKLVLEVCLAIKTVLMPKFLQWPDEDTQDGIKKEFEKASGIPNVIGSM 362
           VSKRFGLGISTCHKLVLEVC AI++VLMPK+LQWPD+D    IK EFE  SGIPNV+GSM
Sbjct: 244 VSKRFGLGISTCHKLVLEVCTAIRSVLMPKYLQWPDDDALRKIKDEFEVISGIPNVVGSM 303

Query: 363 YTTHIPIIAPKVSVAAYFNKRHTERNQKTSYSITVQGVVNPKGVFTDICIGWPGSMPDHE 542
           YTTH+PIIAPK+SVAAYFNKRHTERNQKTSYSITVQGVVNP GVFTD+CIGWPGSMPD +
Sbjct: 304 YTTHVPIIAPKISVAAYFNKRHTERNQKTSYSITVQGVVNPNGVFTDVCIGWPGSMPDDQ 363

Query: 543 ILEKSALYHRGSGG 584
           +LEKSALY R SGG
Sbjct: 364 VLEKSALYQRASGG 377


>ref|XP_002332479.1| predicted protein [Populus trichocarpa] gi|222832470|gb|EEE70947.1|
           predicted protein [Populus trichocarpa]
          Length = 465

 Score =  335 bits (859), Expect = 3e-90
 Identities = 160/194 (82%), Positives = 175/194 (90%)
 Frame = +3

Query: 3   FPESEFRQAFRMSPATFDLICEELNSVVAKEDTMLRAAIPVRQRVAVCIWRLATGEPLRL 182
           +PE EF++AFRMS +TFD ICEELNSV+AKEDT LR AIPVRQRVAVCIWRLATGEPLRL
Sbjct: 134 YPEEEFKKAFRMSKSTFDSICEELNSVIAKEDTTLRNAIPVRQRVAVCIWRLATGEPLRL 193

Query: 183 VSKRFGLGISTCHKLVLEVCLAIKTVLMPKFLQWPDEDTQDGIKKEFEKASGIPNVIGSM 362
           VSKRFGLGISTCHKLVLEVC AI+ VLMPK+LQWPDED     K EFE  SGIPNV+GSM
Sbjct: 194 VSKRFGLGISTCHKLVLEVCSAIRNVLMPKYLQWPDEDNLRKTKNEFESISGIPNVVGSM 253

Query: 363 YTTHIPIIAPKVSVAAYFNKRHTERNQKTSYSITVQGVVNPKGVFTDICIGWPGSMPDHE 542
           YTTHI IIAPK+SVAAYFNKRHTERNQKTSYSITVQGVV+PKGVFTD+CIGWPGSMPD +
Sbjct: 254 YTTHISIIAPKISVAAYFNKRHTERNQKTSYSITVQGVVDPKGVFTDVCIGWPGSMPDDQ 313

Query: 543 ILEKSALYHRGSGG 584
           +LEKSAL+ R +GG
Sbjct: 314 VLEKSALFQRANGG 327


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