BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028082
         (472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511611.1| conserved hypothetical protein [Ricinus comm...   110   9e-23
ref|NP_191599.1| Mitochondrial transcription termination factor ...   106   2e-21
ref|XP_002876552.1| hypothetical protein ARALYDRAFT_907562 [Arab...   105   5e-21
emb|CBI16639.3| unnamed protein product [Vitis vinifera]              104   9e-21
ref|XP_002272894.1| PREDICTED: uncharacterized protein LOC100244...   104   9e-21

>ref|XP_002511611.1| conserved hypothetical protein [Ricinus communis]
           gi|223548791|gb|EEF50280.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 561

 Score =  110 bits (276), Expect = 9e-23
 Identities = 51/87 (58%), Positives = 71/87 (81%)
 Frame = +2

Query: 209 RPKIIQQAQHALTDYLHATRSLSFTHAENISKNSLYSITSLISRMDYSYTTFSSDFLRFL 388
           + K I++AQ ALTDYLH+TRSL F +AE+ISKNSL S+++LI+ +D+S + FS    +FL
Sbjct: 29  KAKAIREAQQALTDYLHSTRSLPFAYAEHISKNSLVSLSNLIANVDFSVSDFSRSVRKFL 88

Query: 389 RYHPINEFEFFFESIGIPFLQLDSFLP 469
           RYHPINEFEFF+ESIG+ + ++ +FLP
Sbjct: 89  RYHPINEFEFFYESIGLDYNEVRNFLP 115


>ref|NP_191599.1| Mitochondrial transcription termination factor family protein
           [Arabidopsis thaliana] gi|7287988|emb|CAB81826.1|
           putative protein [Arabidopsis thaliana]
           gi|332646534|gb|AEE80055.1| Mitochondrial transcription
           termination factor family protein [Arabidopsis thaliana]
          Length = 558

 Score =  106 bits (264), Expect = 2e-21
 Identities = 50/84 (59%), Positives = 63/84 (75%)
 Frame = +2

Query: 221 IQQAQHALTDYLHATRSLSFTHAENISKNSLYSITSLISRMDYSYTTFSSDFLRFLRYHP 400
           I +AQ A+TDYLH TRSLS+THAE I+ N+  SI +LI ++D+S  TFS    + L YHP
Sbjct: 34  IGKAQQAITDYLHTTRSLSYTHAEQIASNASVSIRNLILKLDFSVPTFSKSLRKHLSYHP 93

Query: 401 INEFEFFFESIGIPFLQLDSFLPE 472
           INEFEFFFESIGI + ++  FLPE
Sbjct: 94  INEFEFFFESIGIDYSEVSEFLPE 117


>ref|XP_002876552.1| hypothetical protein ARALYDRAFT_907562 [Arabidopsis lyrata subsp.
           lyrata] gi|297322390|gb|EFH52811.1| hypothetical protein
           ARALYDRAFT_907562 [Arabidopsis lyrata subsp. lyrata]
          Length = 560

 Score =  105 bits (261), Expect = 5e-21
 Identities = 50/84 (59%), Positives = 63/84 (75%)
 Frame = +2

Query: 221 IQQAQHALTDYLHATRSLSFTHAENISKNSLYSITSLISRMDYSYTTFSSDFLRFLRYHP 400
           I +AQ A+TDYLH TRSLS+THAE I+ N+  SI +LI ++D+S  TFS    + L YHP
Sbjct: 34  IGKAQQAITDYLHTTRSLSYTHAEQIASNASVSIRNLILKLDFSVPTFSKSLRKHLSYHP 93

Query: 401 INEFEFFFESIGIPFLQLDSFLPE 472
           INEFEFFFESIGI + ++  FLPE
Sbjct: 94  INEFEFFFESIGIDYSEVCEFLPE 117


>emb|CBI16639.3| unnamed protein product [Vitis vinifera]
          Length = 252

 Score =  104 bits (259), Expect = 9e-21
 Identities = 49/87 (56%), Positives = 65/87 (74%)
 Frame = +2

Query: 209 RPKIIQQAQHALTDYLHATRSLSFTHAENISKNSLYSITSLISRMDYSYTTFSSDFLRFL 388
           R + +  AQ ALTDY H+TRSL F +AE+I +NS YS+   IS++++S ++F+  F RFL
Sbjct: 37  RSQAVLLAQKALTDYFHSTRSLPFLYAEHIGRNSFYSLYDPISKVEFSLSSFAKSFERFL 96

Query: 389 RYHPINEFEFFFESIGIPFLQLDSFLP 469
           RYHPINEFEFFFESIGI   ++  FLP
Sbjct: 97  RYHPINEFEFFFESIGITQKEISGFLP 123


>ref|XP_002272894.1| PREDICTED: uncharacterized protein LOC100244389 [Vitis vinifera]
          Length = 561

 Score =  104 bits (259), Expect = 9e-21
 Identities = 49/87 (56%), Positives = 65/87 (74%)
 Frame = +2

Query: 209 RPKIIQQAQHALTDYLHATRSLSFTHAENISKNSLYSITSLISRMDYSYTTFSSDFLRFL 388
           R + +  AQ ALTDY H+TRSL F +AE+I +NS YS+   IS++++S ++F+  F RFL
Sbjct: 37  RSQAVLLAQKALTDYFHSTRSLPFLYAEHIGRNSFYSLYDPISKVEFSLSSFAKSFERFL 96

Query: 389 RYHPINEFEFFFESIGIPFLQLDSFLP 469
           RYHPINEFEFFFESIGI   ++  FLP
Sbjct: 97  RYHPINEFEFFFESIGITQKEISGFLP 123