BLASTX nr result

ID: Coptis25_contig00028075 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028075
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320213.1| endoplasmic reticulum [ER]-type calcium ATPa...   220   1e-55
ref|XP_002523297.1| calcium-transporting atpase 4, endoplasmic r...   212   3e-53
ref|XP_002264585.2| PREDICTED: calcium-transporting ATPase, endo...   211   5e-53
emb|CAN66975.1| hypothetical protein VITISV_022077 [Vitis vinifera]   211   5e-53
ref|XP_003528778.1| PREDICTED: calcium-transporting ATPase, endo...   208   4e-52

>ref|XP_002320213.1| endoplasmic reticulum [ER]-type calcium ATPase [Populus trichocarpa]
            gi|222860986|gb|EEE98528.1| endoplasmic reticulum
            [ER]-type calcium ATPase [Populus trichocarpa]
          Length = 1045

 Score =  220 bits (560), Expect = 1e-55
 Identities = 104/121 (85%), Positives = 115/121 (95%)
 Frame = +3

Query: 3    SQLRTWGECPSWSNFSVTPFMVSGGRMISFSDPCDYFSVGKVKAMTLSLSVLVAIEMFNS 182
            SQLR WGECP+WSNF+VTP+ V GGRMI+FS+PCDYFS GKVKAMTLSLSVLVAIEMFNS
Sbjct: 897  SQLRNWGECPTWSNFTVTPYQVGGGRMITFSNPCDYFSAGKVKAMTLSLSVLVAIEMFNS 956

Query: 183  LNALSEDNSLVRMPPWKNPFLLLAMSVSFGLHFLILYVPFLADVFGIVPLTLKEWYLVIL 362
            LNALSEDNSLV MPPW+NP+LL+AMSVSFGLH +ILYVPFLADVFGIVPL+LKEW+LVIL
Sbjct: 957  LNALSEDNSLVTMPPWRNPWLLVAMSVSFGLHCVILYVPFLADVFGIVPLSLKEWFLVIL 1016

Query: 363  V 365
            V
Sbjct: 1017 V 1017


>ref|XP_002523297.1| calcium-transporting atpase 4, endoplasmic reticulum-type, putative
           [Ricinus communis] gi|223537385|gb|EEF39013.1|
           calcium-transporting atpase 4, endoplasmic
           reticulum-type, putative [Ricinus communis]
          Length = 591

 Score =  212 bits (539), Expect = 3e-53
 Identities = 101/121 (83%), Positives = 110/121 (90%)
 Frame = +3

Query: 3   SQLRTWGECPSWSNFSVTPFMVSGGRMISFSDPCDYFSVGKVKAMTLSLSVLVAIEMFNS 182
           SQLR WGEC  WSNF V P+ + GGRMI+FS+PCDYFSVGKVKAMTLSLSVLVAIEMFNS
Sbjct: 444 SQLRNWGECSKWSNFCVAPYSIGGGRMIAFSNPCDYFSVGKVKAMTLSLSVLVAIEMFNS 503

Query: 183 LNALSEDNSLVRMPPWKNPFLLLAMSVSFGLHFLILYVPFLADVFGIVPLTLKEWYLVIL 362
           LNALSEDNSLV MPPW+NP+LL+AMSVSFGLH LILYVPFLADVFG+VPL+L EW LVIL
Sbjct: 504 LNALSEDNSLVTMPPWRNPWLLVAMSVSFGLHCLILYVPFLADVFGVVPLSLNEWLLVIL 563

Query: 363 V 365
           V
Sbjct: 564 V 564


>ref|XP_002264585.2| PREDICTED: calcium-transporting ATPase, endoplasmic
            reticulum-type-like [Vitis vinifera]
          Length = 1051

 Score =  211 bits (537), Expect = 5e-53
 Identities = 101/121 (83%), Positives = 112/121 (92%)
 Frame = +3

Query: 3    SQLRTWGECPSWSNFSVTPFMVSGGRMISFSDPCDYFSVGKVKAMTLSLSVLVAIEMFNS 182
            SQLR WGEC SWSNF+VTPF V  GR+I+FS+PCDYFSVGKVKA+TLSLSVLVAIEMFNS
Sbjct: 903  SQLRNWGECSSWSNFTVTPFTVGDGRVITFSNPCDYFSVGKVKAVTLSLSVLVAIEMFNS 962

Query: 183  LNALSEDNSLVRMPPWKNPFLLLAMSVSFGLHFLILYVPFLADVFGIVPLTLKEWYLVIL 362
            LNALSEDNSLV MPPW+NP+LL+AMS SFG+H LILYVPFLADVFGIVPL+L EW+LVIL
Sbjct: 963  LNALSEDNSLVTMPPWRNPWLLVAMSFSFGMHCLILYVPFLADVFGIVPLSLNEWFLVIL 1022

Query: 363  V 365
            V
Sbjct: 1023 V 1023


>emb|CAN66975.1| hypothetical protein VITISV_022077 [Vitis vinifera]
          Length = 1051

 Score =  211 bits (537), Expect = 5e-53
 Identities = 101/121 (83%), Positives = 112/121 (92%)
 Frame = +3

Query: 3    SQLRTWGECPSWSNFSVTPFMVSGGRMISFSDPCDYFSVGKVKAMTLSLSVLVAIEMFNS 182
            SQLR WGEC SWSNF+VTPF V  GR+I+FS+PCDYFSVGKVKA+TLSLSVLVAIEMFNS
Sbjct: 903  SQLRNWGECSSWSNFTVTPFTVGDGRVITFSNPCDYFSVGKVKAVTLSLSVLVAIEMFNS 962

Query: 183  LNALSEDNSLVRMPPWKNPFLLLAMSVSFGLHFLILYVPFLADVFGIVPLTLKEWYLVIL 362
            LNALSEDNSLV MPPW+NP+LL+AMS SFG+H LILYVPFLADVFGIVPL+L EW+LVIL
Sbjct: 963  LNALSEDNSLVTMPPWRNPWLLVAMSFSFGMHCLILYVPFLADVFGIVPLSLNEWFLVIL 1022

Query: 363  V 365
            V
Sbjct: 1023 V 1023


>ref|XP_003528778.1| PREDICTED: calcium-transporting ATPase, endoplasmic
            reticulum-type-like [Glycine max]
          Length = 1057

 Score =  208 bits (529), Expect = 4e-52
 Identities = 93/121 (76%), Positives = 114/121 (94%)
 Frame = +3

Query: 3    SQLRTWGECPSWSNFSVTPFMVSGGRMISFSDPCDYFSVGKVKAMTLSLSVLVAIEMFNS 182
            SQLR WGECPSWSNF+V PF V+GGR+I+FS+PCDYFSVGK+KAMTLSLSVLVAIEMFNS
Sbjct: 909  SQLRNWGECPSWSNFTVAPFEVAGGRLITFSNPCDYFSVGKLKAMTLSLSVLVAIEMFNS 968

Query: 183  LNALSEDNSLVRMPPWKNPFLLLAMSVSFGLHFLILYVPFLADVFGIVPLTLKEWYLVIL 362
            LNALSE+NSL ++PPW+NP+LL+AMS+SFGLH LILY PFLA+VFG++PL+L EW++V+L
Sbjct: 969  LNALSEENSLRKLPPWRNPWLLVAMSISFGLHCLILYTPFLAEVFGVIPLSLNEWFMVLL 1028

Query: 363  V 365
            +
Sbjct: 1029 I 1029


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