BLASTX nr result

ID: Coptis25_contig00028072 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028072
         (807 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309592.1| 2-oxoglutarate-dependent dioxygenase [Populu...   290   3e-76
ref|XP_002324836.1| 2-oxoglutarate-dependent dioxygenase [Populu...   288   8e-76
ref|XP_002284931.1| PREDICTED: gibberellin 3-beta-dioxygenase 4-...   279   6e-73
emb|CBI20990.3| unnamed protein product [Vitis vinifera]              273   4e-71
ref|XP_002515597.1| Gibberellin 2-beta-dioxygenase, putative [Ri...   262   8e-68

>ref|XP_002309592.1| 2-oxoglutarate-dependent dioxygenase [Populus trichocarpa]
           gi|222855568|gb|EEE93115.1| 2-oxoglutarate-dependent
           dioxygenase [Populus trichocarpa]
          Length = 314

 Score =  290 bits (742), Expect = 3e-76
 Identities = 136/258 (52%), Positives = 187/258 (72%), Gaps = 2/258 (0%)
 Frame = +1

Query: 1   EEMFKASKELFDLPDEIKVKNLNSKPYYGYIGKIDAVPLYESLGIEDATTVDGARTFAQQ 180
           EEMF A K LFDLP+E K +++N KPY  Y+GK   +P +ES G++DA T+D ++ F   
Sbjct: 58  EEMFGAMKALFDLPEETKNRHVNPKPYRSYLGKCPVIPFHESFGVDDAPTLDASQAFTTL 117

Query: 181 IWPDGNPVFCETVNSISNKLYDLELLVLKMVMQSFGAEKYYNSYVESNNTIVRVNGYKAP 360
           +WP+GNP FCET++S+S+K+ +L  LV+KM+ +SFG EK Y+S++E   +I++V  YK P
Sbjct: 118 MWPEGNPSFCETIHSMSSKMQELNFLVMKMIYESFGIEKLYDSFLEETTSILKVMKYKVP 177

Query: 361 HSN-DLQMALAPHTDNSSLTVLCQ-ESQGLEVLSKEGEWLRVAPLPGAFVVFVGEALKAW 534
            S+ +  + L  HTD +++T+LCQ E QGLEV +K G+W +V     AF   VG+ +KAW
Sbjct: 178 PSDTESAIGLVAHTDKNAITILCQNEVQGLEVQTKNGDWAQVMVPENAFTAIVGDTVKAW 237

Query: 535 SNARLHTAKHRVMTNGDRQRYSFGLFLAPKEGAVIEIPEELVDKEHPLLYRPFNYMDYLN 714
           SN RLH A+HRV+ +GDR RYS GLF  PKE AVIE+P ELVDKEHPL YRPFN+ DYL+
Sbjct: 238 SNGRLHAARHRVVISGDRDRYSCGLFSTPKEEAVIEVPNELVDKEHPLQYRPFNFSDYLS 297

Query: 715 YYASNLHMDNVLEVYAGV 768
           Y+ S L  D+ LE+YA +
Sbjct: 298 YFVSKL-SDDALEIYASI 314


>ref|XP_002324836.1| 2-oxoglutarate-dependent dioxygenase [Populus trichocarpa]
           gi|222866270|gb|EEF03401.1| 2-oxoglutarate-dependent
           dioxygenase [Populus trichocarpa]
          Length = 313

 Score =  288 bits (738), Expect = 8e-76
 Identities = 135/258 (52%), Positives = 184/258 (71%), Gaps = 2/258 (0%)
 Frame = +1

Query: 1   EEMFKASKELFDLPDEIKVKNLNSKPYYGYIGKIDAVPLYESLGIEDATTVDGARTFAQQ 180
           EEMF A K LFDLP+E K K++N KPY  Y+G    +P +ES G++DA T+D ++ F   
Sbjct: 57  EEMFVALKALFDLPEETKNKHVNPKPYRSYLGNCPVIPFHESFGVDDAPTLDASQAFTNL 116

Query: 181 IWPDGNPVFCETVNSISNKLYDLELLVLKMVMQSFGAEKYYNSYVESNNTIVRVNGYKAP 360
           +WP+GNP FCET++ +S+K+ +L  LV+KM+ +SF  EK Y+S+VE   +I R+  YK P
Sbjct: 117 MWPEGNPSFCETIHGMSSKMQELNFLVMKMIYESFDIEKLYDSFVEETTSIFRIMKYKVP 176

Query: 361 HS-NDLQMALAPHTDNSSLTVLCQ-ESQGLEVLSKEGEWLRVAPLPGAFVVFVGEALKAW 534
            S  D  + L  HTD +++T+LCQ E QGLE+ +K G W +V     AF   VG+ALKAW
Sbjct: 177 PSATDSSIGLVAHTDKNAITILCQNEVQGLEIQTKNGYWAQVMVPENAFTAVVGDALKAW 236

Query: 535 SNARLHTAKHRVMTNGDRQRYSFGLFLAPKEGAVIEIPEELVDKEHPLLYRPFNYMDYLN 714
           SN RLH A+HRV+ +G++ RYS GLF  PKE AV+E+P+ELVDKEHPL YRPFNY DY++
Sbjct: 237 SNGRLHAARHRVVISGEKDRYSCGLFSMPKEEAVVEVPDELVDKEHPLQYRPFNYSDYIS 296

Query: 715 YYASNLHMDNVLEVYAGV 768
           Y+ S L  D+ LE+YAG+
Sbjct: 297 YFVSKL-SDDALEIYAGI 313


>ref|XP_002284931.1| PREDICTED: gibberellin 3-beta-dioxygenase 4-like [Vitis vinifera]
          Length = 316

 Score =  279 bits (713), Expect = 6e-73
 Identities = 130/257 (50%), Positives = 179/257 (69%), Gaps = 1/257 (0%)
 Frame = +1

Query: 1   EEMFKASKELFDLPDEIKVKNLNSKPYYGYIGKIDAVPLYESLGIEDATTVDGARTFAQQ 180
           +EMF   K LFDLP+E K K+ ++KPY+ Y GK   VPL ES GI+DA     A+ F   
Sbjct: 59  QEMFMVMKTLFDLPEETKKKHSSTKPYHSYQGKCPIVPLLESFGIDDAPQPQAAQAFTNL 118

Query: 181 IWPDGNPVFCETVNSISNKLYDLELLVLKMVMQSFGAEKYYNSYVESNNTIVRVNGYKAP 360
           +WP+GNP FC  + S++ K+ +L  +VLK++++S G EKYYNS  E++ ++ R+  Y  P
Sbjct: 119 LWPEGNPAFCGALISMATKMLELNFIVLKLILESLGMEKYYNSQKENSASVFRLMKYTVP 178

Query: 361 HSNDLQMALAPHTDNSSLTVLCQ-ESQGLEVLSKEGEWLRVAPLPGAFVVFVGEALKAWS 537
            SND  + L  HTD + LT+LCQ E QGLEVLSKEG W+R+     +F+V +G+ LKAW+
Sbjct: 179 PSNDSAIGLVTHTDKNILTILCQNEVQGLEVLSKEGNWIRLNFCKDSFIVIIGDLLKAWT 238

Query: 538 NARLHTAKHRVMTNGDRQRYSFGLFLAPKEGAVIEIPEELVDKEHPLLYRPFNYMDYLNY 717
           N RLH  +HRV+ NGD+ RYS G+F+ P +   IE+PEELVD +HPL YRPF Y DY+++
Sbjct: 239 NGRLHAVRHRVVMNGDKDRYSCGMFVLPGDTVTIEVPEELVDNDHPLRYRPFTYSDYMSF 298

Query: 718 YASNLHMDNVLEVYAGV 768
           + SN+  D+ LEVYAGV
Sbjct: 299 FTSNI-CDDALEVYAGV 314


>emb|CBI20990.3| unnamed protein product [Vitis vinifera]
          Length = 252

 Score =  273 bits (697), Expect = 4e-71
 Identities = 127/250 (50%), Positives = 175/250 (70%), Gaps = 1/250 (0%)
 Frame = +1

Query: 22  KELFDLPDEIKVKNLNSKPYYGYIGKIDAVPLYESLGIEDATTVDGARTFAQQIWPDGNP 201
           K LFDLP+E K K+ ++KPY+ Y GK   VPL ES GI+DA     A+ F   +WP+GNP
Sbjct: 2   KTLFDLPEETKKKHSSTKPYHSYQGKCPIVPLLESFGIDDAPQPQAAQAFTNLLWPEGNP 61

Query: 202 VFCETVNSISNKLYDLELLVLKMVMQSFGAEKYYNSYVESNNTIVRVNGYKAPHSNDLQM 381
            FC  + S++ K+ +L  +VLK++++S G EKYYNS  E++ ++ R+  Y  P SND  +
Sbjct: 62  AFCGALISMATKMLELNFIVLKLILESLGMEKYYNSQKENSASVFRLMKYTVPPSNDSAI 121

Query: 382 ALAPHTDNSSLTVLCQ-ESQGLEVLSKEGEWLRVAPLPGAFVVFVGEALKAWSNARLHTA 558
            L  HTD + LT+LCQ E QGLEVLSKEG W+R+     +F+V +G+ LKAW+N RLH  
Sbjct: 122 GLVTHTDKNILTILCQNEVQGLEVLSKEGNWIRLNFCKDSFIVIIGDLLKAWTNGRLHAV 181

Query: 559 KHRVMTNGDRQRYSFGLFLAPKEGAVIEIPEELVDKEHPLLYRPFNYMDYLNYYASNLHM 738
           +HRV+ NGD+ RYS G+F+ P +   IE+PEELVD +HPL YRPF Y DY++++ SN+  
Sbjct: 182 RHRVVMNGDKDRYSCGMFVLPGDTVTIEVPEELVDNDHPLRYRPFTYSDYMSFFTSNI-C 240

Query: 739 DNVLEVYAGV 768
           D+ LEVYAGV
Sbjct: 241 DDALEVYAGV 250


>ref|XP_002515597.1| Gibberellin 2-beta-dioxygenase, putative [Ricinus communis]
           gi|223545541|gb|EEF47046.1| Gibberellin
           2-beta-dioxygenase, putative [Ricinus communis]
          Length = 316

 Score =  262 bits (669), Expect = 8e-68
 Identities = 128/263 (48%), Positives = 178/263 (67%), Gaps = 7/263 (2%)
 Frame = +1

Query: 1   EEMFKASKELFDLPDEIKVKNLNSKPYYGYIGKIDAVPLYESLGIEDATTVDGARTFAQQ 180
           + +F + K LFDLP++ K K +N KPY  Y G+   +P YES G++DA  +   + F   
Sbjct: 55  QNLFVSMKALFDLPEDTKTKYVNPKPYRSYTGRSPVIPFYESFGLDDAHKLGQVQDFTNL 114

Query: 181 IWPDGNPVFCETVNSISNKLYDLELLVLKMVMQSFGAEKYYNSYVESNNTIVRVNGYKAP 360
           +WP GN  FCE ++ +S+K+ ++ L+VLKM+ +SFG EK+Y+S+++ + ++ +V  Y AP
Sbjct: 115 MWPQGNTSFCEILHVMSSKMLEMNLMVLKMIFESFGMEKHYDSHIQDSTSLFKVMKYIAP 174

Query: 361 HSN------DLQMALAPHTDNSSLTVLCQ-ESQGLEVLSKEGEWLRVAPLPGAFVVFVGE 519
            SN      D  +AL  H D +++T+LCQ E QGLEV SK+GEW RV     AFVV VGE
Sbjct: 175 PSNGRGSGEDSAIALRAHRDKNAITILCQNEVQGLEVESKDGEWARVMVPQDAFVVIVGE 234

Query: 520 ALKAWSNARLHTAKHRVMTNGDRQRYSFGLFLAPKEGAVIEIPEELVDKEHPLLYRPFNY 699
           ALK WSN RL  A+HRV+ NG   RYS  LF  PKE + IE+P ELVDK+HPLLYRPF +
Sbjct: 235 ALKVWSNGRLEAARHRVVINGKEDRYSCALFSMPKEESKIEVPCELVDKDHPLLYRPFIF 294

Query: 700 MDYLNYYASNLHMDNVLEVYAGV 768
            DY++Y+ S L  D+ LE+YAG+
Sbjct: 295 SDYISYFVSKL-SDDALEIYAGI 316


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