BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028068
         (1249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...    70   1e-09
ref|XP_003540911.1| PREDICTED: uncharacterized protein LOC100813...    64   6e-08
ref|XP_002523454.1| RNA binding protein, putative [Ricinus commu...    64   6e-08
ref|XP_003614970.1| hypothetical protein MTR_5g061900 [Medicago ...    63   2e-07
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga...    63   2e-07

>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score = 69.7 bits (169), Expect = 1e-09
 Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 8/171 (4%)
 Frame = -2

Query: 1248 NELIWYPASNGKFSVKAAYNFLHGEKWSENSSSFHKK-NVCQIWKLKLAAKWQHFMWRLY 1072
            +EL W  + +G +SVK AY    G     N   FH+  N+  +W L ++ K +HF+WR  
Sbjct: 1006 DELTWAYSKDGTYSVKTAYMLGKGG----NLDDFHRVWNI--LWSLNVSPKVRHFLWRAC 1059

Query: 1071 LQALPTGDLLEARHVLGFFSCPWCEKCIETPMHLFVKCAWVRHL*FSGPMNLRM-DNYNC 895
              +LP   +L+ RH++    CP C +  ET  HLF +C          PM+L++ +    
Sbjct: 1060 TSSLPVRKVLQRRHLIDEAGCPCCAREDETQFHLFYRC----------PMSLKLWEELGS 1109

Query: 894  WSM------REWLDEVINWSKNSIEEVVGK*LLVCFVLQSLWKTINAYKFD 760
            + +          D ++ WS+    +VV K    C++L ++W   N   F+
Sbjct: 1110 YILLPGIEDEAMCDTLVRWSQMD-AKVVQK---GCYILWNVWVERNRRVFE 1156


>ref|XP_003540911.1| PREDICTED: uncharacterized protein LOC100813631 [Glycine max]
          Length = 1227

 Score = 64.3 bits (155), Expect = 6e-08
 Identities = 39/96 (40%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
 Frame = -2

Query: 1239 IWYPASNGKFSVKAAYNFLHGEKWSENS-SSFHKKNVCQIWKLKLAAKWQHFMWRLYLQA 1063
            +W    NG FS K+AYN +  E+  E+  S FH     Q+W LK+  K   F WRL    
Sbjct: 1028 LWGAEPNGIFSTKSAYNLIKAEQLLEDQYSGFH-----QLWDLKVPPKVLSFAWRLLWDR 1082

Query: 1062 LPTGDLLEARHV-LGFFSCPWCEKCIETPMHLFVKC 958
            LPT D L  R + L    CP C+   ET  HLF  C
Sbjct: 1083 LPTKDNLSRRQIQLDNDLCPLCQTQPETASHLFFTC 1118


>ref|XP_002523454.1| RNA binding protein, putative [Ricinus communis]
            gi|223537282|gb|EEF38913.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 446

 Score = 64.3 bits (155), Expect = 6e-08
 Identities = 44/166 (26%), Positives = 78/166 (46%), Gaps = 5/166 (3%)
 Frame = -2

Query: 1236 WYPASNGKFSVKAAY-----NFLHGEKWSENSSSFHKKNVCQIWKLKLAAKWQHFMWRLY 1072
            W  +++G FS ++ Y     + L+    S +  +    N C  W+L +    +HFMWRL 
Sbjct: 90   WVHSNSGIFSSRSTYYIAWNSLLNFTPPSTSHGTAPVVNKC--WRLNILHGVKHFMWRLN 147

Query: 1071 LQALPTGDLLEARHVLGFFSCPWCEKCIETPMHLFVKCAWVRHL*FSGPMNLRMDNYNCW 892
               LP  + L+ R +     C  C  C+ET  ++F KC +VR    + P+ LR+D     
Sbjct: 148  HNLLPCIENLKNRKIDMGEICSRCGGCVETQTYVFKKCQFVRSFWLTYPLGLRVDTIVVE 207

Query: 891  SMREWLDEVINWSKNSIEEVVGK*LLVCFVLQSLWKTINAYKFDKK 754
             ++ W++++ +   +   E     LL C+     W   N + F++K
Sbjct: 208  DLKNWVNQIHSVGDDDFIEKFAM-LLWCY-----WNLRNKFIFERK 247


>ref|XP_003614970.1| hypothetical protein MTR_5g061900 [Medicago truncatula]
            gi|355516305|gb|AES97928.1| hypothetical protein
            MTR_5g061900 [Medicago truncatula]
          Length = 238

 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 33/93 (35%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
 Frame = -2

Query: 1221 NGKFSVKAAYNFLHGEKWSENSSSFHKKNVCQ-IWKLKLAAKWQHFMWRLYLQALPTGDL 1045
            NG+++VK  Y     E    ++  FH +   Q IWK+    K ++ +WR+Y   +PT   
Sbjct: 4    NGRYTVKIGYKLAMIELL--HTDRFHVEGAWQRIWKVNSPHKARNLLWRIYRGCVPTHFR 61

Query: 1044 LEARHVLGFFSCPWCEKCIETPMHLFVKCAWVR 946
            L++RHV     CPWC+  IE   H FV C   R
Sbjct: 62   LQSRHVQCEVVCPWCDTTIEDDWHAFVGCTMAR 94


>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 42/112 (37%), Positives = 55/112 (49%), Gaps = 1/112 (0%)
 Frame = -2

Query: 1248 NELIWYPASNGKFSVKAAYNFLHGEKWSENSSSFHKKNVCQIWKLKLAAKWQHFMWRLYL 1069
            +EL W    +  +SVK AY    G     N  +FH+  V  IW L ++ K +HF+WRL  
Sbjct: 1003 DELTWAFTKDATYSVKTAYMIGKGG----NLDNFHQAWV-DIWSLDVSPKVRHFLWRLCT 1057

Query: 1068 QALPTGDLLEARHVLGFFSCPWCEKCIETPMHLFVKCAWVRHL*F-SGPMNL 916
             +LP   LL+ RH+     CPW    IET  H    C  +R L   SG  NL
Sbjct: 1058 TSLPVRSLLKHRHLTDDDLCPWGCGEIETQRHAIFDCPKMRDLWLDSGCQNL 1109